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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021846_P016 Maize cytosol 93.16 92.97
TraesCS2D01G206200.1 Wheat cytosol, golgi, unclear 83.5 84.09
TraesCS2B01G225800.2 Wheat cytosol 83.0 83.59
TraesCS2A01G198400.1 Wheat cytosol, golgi 82.7 83.28
Os07t0570300-01 Rice plastid 82.6 83.1
HORVU2Hr1G038720.19 Barley extracellular 76.96 82.44
Os07t0570500-01 Rice cytosol, plasma membrane 80.48 81.14
Os07t0570100-01 Rice cytosol, plasma membrane 79.58 79.74
GSMUA_Achr2P17790_001 Banana cytosol 14.69 78.49
VIT_08s0007g08490.t01 Wine grape cytosol 66.5 68.5
PGSC0003DMT400070070 Potato cytosol, nucleus, peroxisome 39.34 68.36
GSMUA_Achr2P17800_001 Banana cytosol 51.71 67.81
VIT_08s0007g08480.t01 Wine grape cytosol 64.19 66.11
KRH66936 Soybean cytosol 63.98 65.98
KRG95264 Soybean cytosol 63.88 65.87
CDX72028 Canola cytosol 36.52 65.17
Solyc04g015680.2.1 Tomato cytosol, extracellular 62.88 64.37
AT2G41790.1 Thale cress cytosol 62.27 63.81
CDX79914 Canola cytosol 62.17 63.71
Bra004649.1-P Field mustard cytosol 62.17 63.71
CDY48762 Canola cytosol 62.07 63.61
AT3G57470.2 Thale cress cytosol 60.56 62.32
Bra007329.1-P Field mustard cytosol 59.66 61.71
CDY06103 Canola cytosol 60.56 61.62
EES01562 Sorghum cytosol 59.86 60.84
CDX88949 Canola cytosol 59.05 60.27
Bra014622.1-P Field mustard cytosol 58.65 59.86
CDY31008 Canola cytosol 58.55 59.75
CDY61872 Canola cytosol 59.15 59.45
Solyc04g015690.2.1 Tomato cytosol 58.15 59.28
CDY72352 Canola cytosol, peroxisome 18.91 55.95
PGSC0003DMT400070079 Potato cytosol 12.07 54.55
CDY33819 Canola cytosol, extracellular 52.21 53.45
AT3G57460.1 Thale cress cytosol, extracellular 13.48 52.55
KRH15819 Soybean extracellular 9.26 51.69
PGSC0003DMT400070080 Potato peroxisome 18.31 50.98
CDY33824 Canola extracellular 4.93 37.4
KXG39425 Sorghum nucleus 30.38 29.21
CDY54849 Canola cytosol 3.62 21.05
CDY43076 Canola cytosol 13.78 19.11
Protein Annotations
MapMan:19.4.5.4.2Gene3D:3.30.830.10UniProt:A0A1B6QF26GO:GO:0003674GO:GO:0003824GO:GO:0004222
GO:GO:0005488GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538
GO:GO:0046872EnsemblPlants:KXG36518ProteinID:KXG36518ProteinID:KXG36518.1InterPro:Metalloenz_LuxS/M16PFAM:PF00675
PFAM:PF05193PFAM:PF16187ScanProsite:PS00143PANTHER:PTHR43690PANTHER:PTHR43690:SF7InterPro:Pept_M16_N
InterPro:Pept_M16_Zn_BSInterPro:Peptidase_M16_CInterPro:Peptidase_M16_MEnsemblPlantsGene:SORBI_3002G345700SUPFAM:SSF63411UniParc:UPI0001C80E10
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:71148160..71160298
Molecular Weight (calculated)
113481.0 Da
IEP (calculated)
6.038
GRAVY (calculated)
-0.363
Length
994 amino acids
Sequence
(BLAST)
001: MDSRPRETDA PGDPANGAAP PQAAAVTSAT ATGDVEIIRP RNDKRGYRRV VLPNSLECLL ISDPDTDKAA ASMNVSVGYF CDPDGLEGLA HFLEHMLFYA
101: SEKYPEEDSY SKYIAEHGGS TNAFTSSEHT NFYFDVNSDS LHDALDRFAQ FFIKPLMSPD ATLREIKAVD SENQKNLLSD PWRMSQLQKH LCAENHPYHK
201: FSTGNWNTLE VKAKEKGLDT RLELIKFYDS HYSANLMQLV VYGKDSLDNL QNLVENKFCD IRDVGRKPFS FPGHPCTREH LQILVKAVPI KQGHTLRILF
301: PITPNIRRYK EGPCKYISHL IGHEGEGSLF YILKKLGWAI SLEAGEGDWS HDFSFFSVVI QLTDVGQEHM EDTVGLLFRY IKLLQTSGTP KWIFDELQAI
401: CETGFHYRDK SPPINYVVNI SSNMQIFPPE DWLIASSVPS KFSPDAIQNI LNELTPETVR IFWESKKFEG KTNLAEPWYG TSYSVEAVPP SIIQNWVDKA
501: PKEDLDLPKR NIFIPNDLSL KCVEEKASFP AMLRKTSFSR LWYKPDTMFF TPKAYIKMDF HCPLSQSSPE SAVLTDVFTR LLMDYLNDYA YDAQVAGLYY
601: AVKPNDTGFQ VTMVGFNDKM RTLLETVIGK IAEFEVKADR FSVIKEAMTK EYENFKFRQP YQQVLYYCSL ILEDQAWPWD EEFSALSHLE ASDLGIFLPR
701: LLSKTFIECY FAGNIEANEA KNIVHHLEDV LFNAPISACK PLSPSQHLAK RIVKLEKGLR YYYPAMCSNH QDENSALLHY IQTHQDNVKQ NVLLQLLALV
801: GKQPAFHQLR SVEQLGYIAL LRQRNDSGVR GLQFIIQSTV KDPANLDARV VNFLNMFEGT LYNMSDTEFK SNVSALIDMK LEKYKNIREE SAFFWGEISE
901: GTLKFDRKQE EVAALRELKK EELIDFFNDH VKVNAPQKKI LSIQVYGGLH SAEYETIVQN APPPQSCEIT DIYSFRRSRP LYGSFRGGVG QMKL
Best Arabidopsis Sequence Match ( AT2G41790.1 )
(BLAST)
001: MAVEKSNTTV GGVEILKPRT DNREYRMIVL KNLLQVLLIS DPDTDKCAAS MSVSVGSFSD PQGLEGLAHF LEHMLFYASE KYPEEDSYSK YITEHGGSTN
101: AYTASEETNY HFDVNADCFD EALDRFAQFF IKPLMSADAT MREIKAVDSE NQKNLLSDGW RIRQLQKHLS KEDHPYHKFS TGNMDTLHVR PQAKGVDTRS
201: ELIKFYEEHY SANIMHLVVY GKESLDKIQD LVERMFQEIQ NTNKVVPRFP GQPCTADHLQ ILVKAIPIKQ GHKLGVSWPV TPSIHHYDEA PSQYLGHLIG
301: HEGEGSLFHA LKTLGWATGL SAGEGEWTLD YSFFKVSIDL TDAGHEHMQE ILGLLFNYIQ LLQQTGVCQW IFDELSAICE TKFHYQDKIP PMSYIVDIAS
401: NMQIYPTKDW LVGSSLPTKF NPAIVQKVVD ELSPSNFRIF WESQKFEGQT DKAEPWYNTA YSLEKITSST IQEWVQSAPD VHLHLPAPNV FIPTDLSLKD
501: ADDKETVPVL LRKTPFSRLW YKPDTMFSKP KAYVKMDFNC PLAVSSPDAA VLTDIFTRLL MDYLNEYAYY AQVAGLYYGV SLSDNGFELT LLGYNHKLRI
601: LLETVVGKIA NFEVKPDRFA VIKETVTKEY QNYKFRQPYH QAMYYCSLIL QDQTWPWTEE LDVLSHLEAE DVAKFVPMLL SRTFIECYIA GNVENNEAES
701: MVKHIEDVLF NDPKPICRPL FPSQHLTNRV VKLGEGMKYF YHQDGSNPSD ENSALVHYIQ VHRDDFSMNI KLQLFGLVAK QATFHQLRTV EQLGYITALA
801: QRNDSGIYGV QFIIQSSVKG PGHIDSRVES LLKNFESKLY EMSNEDFKSN VTALIDMKLE KHKNLKEESR FYWREIQSGT LKFNRKEAEV SALKQLQKQE
901: LIDFFDEYIK VGAARKKSLS IRVYGSQHLK EMASDKDEVP SPSVEIEDIV GFRKSQPLHG SFRGCGQPKL
Arabidopsis Description
PXM16Insulin-degrading enzyme-like 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O22941]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.