CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012627_P001	Maize	cytosol	38.69	51.18
CDY33824	Canola	extracellular	16.07	41.22
CDY06103	Canola	cytosol	97.02	33.37
CDX88949	Canola	cytosol	84.82	29.26
CDY31008	Canola	cytosol	83.63	28.85
CDY48762	Canola	cytosol	76.19	26.39
CDX79914	Canola	cytosol	75.89	26.29
CDY61872	Canola	cytosol	76.79	26.09
GSMUA_Achr2P17800_001	Banana	cytosol	57.74	25.59
CDY33819	Canola	cytosol, extracellular	71.43	24.72
VIT_08s0007g08490.t01	Wine grape	cytosol	65.18	22.69
VIT_08s0007g08480.t01	Wine grape	cytosol	62.8	21.87
KRH66936	Soybean	cytosol	58.93	20.54
KRG95264	Soybean	cytosol	58.63	20.44
Solyc04g015680.2.1	Tomato	cytosol, extracellular	58.93	20.39
Os01t0779100-00	Rice	plasma membrane	48.81	19.07
Zm00001d021846_P016	Maize	cytosol	56.25	18.98
HORVU2Hr1G038720.19	Barley	extracellular	52.38	18.97
KXG36518	Sorghum	cytosol	55.95	18.91
Os07t0570100-01	Rice	cytosol, plasma membrane	52.98	17.94
TraesCS3D01G312900.2	Wheat	cytosol	51.49	17.91
TraesCS3B01G347600.1	Wheat	cytosol	51.19	17.79
TraesCS2A01G198400.1	Wheat	cytosol, golgi	52.08	17.73
Zm00001d043274_P008	Maize	plastid	51.79	17.7
TraesCS3A01G318300.2	Wheat	cytosol	50.89	17.68
TraesCS2D01G206200.1	Wheat	cytosol, golgi, unclear	51.79	17.63
TraesCS2B01G225800.2	Wheat	cytosol	51.79	17.63
Os07t0570300-01	Rice	plastid	51.79	17.61
HORVU3Hr1G076480.7	Barley	cytosol	50.6	17.6
EES01562	Sorghum	cytosol	51.19	17.59
Os07t0570500-01	Rice	cytosol, plasma membrane	51.19	17.44
Os01t0778800-01	Rice	plasma membrane	50.0	17.27
CDY06238	Canola	nucleus	15.18	16.56
CDY15592	Canola	cytosol	25.0	11.97
CDY43076	Canola	cytosol	21.43	10.04
CDX86509	Canola	cytosol	20.24	9.86
CDY10234	Canola	cytosol	24.11	8.32
CDY54887	Canola	cytosol	24.4	8.06
CDY05626	Canola	cytosol	10.42	7.2
CDY09948	Canola	cytosol	19.35	6.86
CDY33897	Canola	cytosol	11.61	3.87
PGSC0003DMT400070079	Potato	cytosol	1.79	2.73
CDY54849	Canola	cytosol	1.19	2.34
CDY05627	Canola	cytosol	1.19	1.29
CDY33909	Canola	plasma membrane	3.27	1.28
CDX72028	Canola	cytosol	1.19	0.72
Zm00001d012628_P001	Maize	cytosol	0.3	0.52
PGSC0003DMT400070070	Potato	cytosol, nucleus, peroxisome	0.3	0.17
GSMUA_Achr2P17790_001	Banana	cytosol	0.0	0.0
KRH15819	Soybean	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:CDY72352	EnsemblPlantsGene:GSBRNA2T00027955001	Gene3D:3.30.830.10	GO:A0A078K389	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0046872	InterPro:Metalloenz_LuxS/M16	InterPro:Peptidase_M16_C	PANTHER:PTHR43690	PANTHER:PTHR43690:SF7
PFAM:PF05193	ProteinID:CDY72352	ProteinID:CDY72352.1	SUPFAM:SSF63411	UniParc:UPI0004EE176B	UniProt:A0A078K389
MapMan:19.4.5.4.2	:	:	:	:	:

Description

BnaCnng77280DBnaCnng77280D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K389]

Coordinates

chrLK050407:-:188..2172

Molecular Weight (calculated)

38607.9 Da

IEP (calculated)

5.867

GRAVY (calculated)

-0.417

Length

336 amino acids

Sequence
(BLAST)

001: IPRPNQQALS YCSLVLQDNT WPWTEELDAL SHLEAEDLAS YVPMLLSRTF VECYIAGNVE KNEAESMVKY IEDVLFSGSK PISRPLFPSQ FLTSRVVELG
101: KGMRYFYHQE GSNPSDENSA LVHYIQVHQD EFAMNSKLQL FSLIAKQATF HQLRTVEQLG YITSLSRSLK AGVYGVQFII QSSVKGPGHI DSRVESLLKD
201: LESKIYKISD EEFKSNVTTL IDMKLEKHKN LSDESYFYWE EIQNGTLKFN RRDKEVAALR ELKKEELIDF FNEYIKVDAP KKKSLSICVY GSQHVKEMAS
301: DKDEVASHFT EIEDIVGFRK SQPLYGSLKG WNQLKL

Best Arabidopsis Sequence Match ( AT2G41790.1 )
(BLAST)

001: MAVEKSNTTV GGVEILKPRT DNREYRMIVL KNLLQVLLIS DPDTDKCAAS MSVSVGSFSD PQGLEGLAHF LEHMLFYASE KYPEEDSYSK YITEHGGSTN
101: AYTASEETNY HFDVNADCFD EALDRFAQFF IKPLMSADAT MREIKAVDSE NQKNLLSDGW RIRQLQKHLS KEDHPYHKFS TGNMDTLHVR PQAKGVDTRS
201: ELIKFYEEHY SANIMHLVVY GKESLDKIQD LVERMFQEIQ NTNKVVPRFP GQPCTADHLQ ILVKAIPIKQ GHKLGVSWPV TPSIHHYDEA PSQYLGHLIG
301: HEGEGSLFHA LKTLGWATGL SAGEGEWTLD YSFFKVSIDL TDAGHEHMQE ILGLLFNYIQ LLQQTGVCQW IFDELSAICE TKFHYQDKIP PMSYIVDIAS
401: NMQIYPTKDW LVGSSLPTKF NPAIVQKVVD ELSPSNFRIF WESQKFEGQT DKAEPWYNTA YSLEKITSST IQEWVQSAPD VHLHLPAPNV FIPTDLSLKD
501: ADDKETVPVL LRKTPFSRLW YKPDTMFSKP KAYVKMDFNC PLAVSSPDAA VLTDIFTRLL MDYLNEYAYY AQVAGLYYGV SLSDNGFELT LLGYNHKLRI
601: LLETVVGKIA NFEVKPDRFA VIKETVTKEY QNYKFRQPYH QAMYYCSLIL QDQTWPWTEE LDVLSHLEAE DVAKFVPMLL SRTFIECYIA GNVENNEAES
701: MVKHIEDVLF NDPKPICRPL FPSQHLTNRV VKLGEGMKYF YHQDGSNPSD ENSALVHYIQ VHRDDFSMNI KLQLFGLVAK QATFHQLRTV EQLGYITALA
801: QRNDSGIYGV QFIIQSSVKG PGHIDSRVES LLKNFESKLY EMSNEDFKSN VTALIDMKLE KHKNLKEESR FYWREIQSGT LKFNRKEAEV SALKQLQKQE
901: LIDFFDEYIK VGAARKKSLS IRVYGSQHLK EMASDKDEVP SPSVEIEDIV GFRKSQPLHG SFRGCGQPKL

Arabidopsis Description

PXM16Insulin-degrading enzyme-like 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O22941]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.