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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:mitochondrion
PProwler:mitochondrion
YLoc:cytosol
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os07t0570500-01 Rice cytosol, plasma membrane 85.58 86.11
Os07t0570300-01 Rice plastid 85.38 85.73
TraesCS2D01G206200.1 Wheat cytosol, golgi, unclear 80.65 81.05
HORVU2Hr1G038720.19 Barley extracellular 75.71 80.93
TraesCS2B01G225800.2 Wheat cytosol 80.14 80.55
TraesCS2A01G198400.1 Wheat cytosol, golgi 80.04 80.45
KXG36518 Sorghum cytosol 79.74 79.58
Zm00001d021846_P016 Maize cytosol 79.54 79.22
GSMUA_Achr2P17790_001 Banana cytosol 13.51 72.04
GSMUA_Achr2P17800_001 Banana cytosol 51.21 67.02
VIT_08s0007g08490.t01 Wine grape cytosol 64.52 66.32
VIT_08s0007g08480.t01 Wine grape cytosol 63.0 64.77
PGSC0003DMT400070070 Potato cytosol, nucleus, peroxisome 37.0 64.16
KRH66936 Soybean cytosol 61.79 63.59
KRG95264 Soybean cytosol 61.79 63.59
Solyc04g015680.2.1 Tomato cytosol, extracellular 60.99 62.31
CDX72028 Canola cytosol 34.88 62.12
AT2G41790.1 Thale cress cytosol 60.08 61.44
CDX79914 Canola cytosol 59.88 61.24
Bra004649.1-P Field mustard cytosol 59.88 61.24
CDY48762 Canola cytosol 59.78 61.13
AT3G57470.2 Thale cress cytosol 57.86 59.42
Solyc04g015690.2.1 Tomato cytosol 58.27 59.28
Bra007329.1-P Field mustard cytosol 57.36 59.21
Os01t0778800-01 Rice plasma membrane 57.66 58.79
CDY06103 Canola cytosol 57.86 58.75
CDX88949 Canola cytosol 57.26 58.32
Bra014622.1-P Field mustard cytosol 57.06 58.11
CDY31008 Canola cytosol 56.45 57.49
Os01t0779100-00 Rice plasma membrane 49.6 57.21
CDY61872 Canola cytosol 56.65 56.83
PGSC0003DMT400070079 Potato cytosol 12.1 54.55
PGSC0003DMT400070080 Potato peroxisome 19.25 53.5
CDY72352 Canola cytosol, peroxisome 17.94 52.98
CDY33819 Canola cytosol, extracellular 50.81 51.91
AT3G57460.1 Thale cress cytosol, extracellular 13.0 50.59
KRH15819 Soybean extracellular 9.07 50.56
CDY33824 Canola extracellular 4.94 37.4
Os03t0336300-01 Rice plasma membrane 31.05 29.62
CDY54849 Canola cytosol 3.53 20.47
CDY43076 Canola cytosol 14.21 19.67
Protein Annotations
MapMan:19.4.5.4.2Gene3D:3.30.830.10UniProt:A0A0P0X879ProteinID:BAT02224.1GO:GO:0003674GO:GO:0003824
GO:GO:0004222GO:GO:0005488GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0019538GO:GO:0046872InterPro:Metalloenz_LuxS/M16EnsemblPlantsGene:Os07g0570100EnsemblPlants:Os07t0570100-01PFAM:PF00675
PFAM:PF05193PFAM:PF16187ScanProsite:PS00143PANTHER:PTHR43690PANTHER:PTHR43690:SF7InterPro:Pept_M16_N
InterPro:Pept_M16_Zn_BSInterPro:Peptidase_M16_CInterPro:Peptidase_M16_MSUPFAM:SSF63411UniParc:UPI000393C208SEG:seg
Description
Similar to predicted protein. (Os07t0570100-01)
Coordinates
chr7:-:22939113..22954778
Molecular Weight (calculated)
113942.0 Da
IEP (calculated)
5.474
GRAVY (calculated)
-0.339
Length
992 amino acids
Sequence
(BLAST)
001: ARETTTDAPA EPSSDGAVAA APSAAAAAEG DAEITRPRND KRGYRRVVLP NALECLLVSD PDTDKAAASM NVSVGYFCDP ERLPGLAHFL EHMLFYASEK
101: YPVEDDYSKY IAEHGGSTNA FTCRERTNFY FDVNNSCLDD ALDRFAQFFI KPLISPDATL REINAVDSEN KKNLLSDPLR MSQLQKHFCS ESHPYHKFST
201: GNLDTLLVNP NKEGLDTLEE LIKFYNSHYS ANLMQLVVYG KESLDNLQNL VENKFSDVRN TGRESFSFHG HPCSSEHLQI IVKAVPIKEG HTLRIQWPIT
301: PNIQHYKEGP CKYVSRLVGH EGEGSLFYVL KNLGWAMSLY AWEGDWSYEF SFFNVVIQLT DVGYEHMEDI IGLLFRYIAL LQTSGTRQWI FDELVAISEM
401: GFHYRDKSPP IHYVVNISSN MQIFPPEDWL IASSVPSKFS PDAIQNILND LTPDNVRIFW ESKKFEGQTN LTEPWYGTSY SVEAVTPSII QKWVNMAPME
501: DLHIPKPNIF IPSDLSLKNV EEKGSFPCML RKTMFSRVWY KPDTMFFTPK AYVKMDFHCP LSNSSPESTV LTDMFTRLIM DYLNDFAYDA QIAGLYYFIR
601: PSDTGFQITM VGYNDKMRTL LDTVIGKIAE FEVKVDRFAV IKETIIKDYE NFKFRQPYEQ AFYYCSLILE EQTWAWDEKL AAVSHIEASD LQIFLPRLLG
701: KTFIECYFAG NMEPGEAKSV IQHVEDTLFN APISFCKALP PSQHLTKRIV KLERGWRYYY PALCLNHQDE KNSSILHYIQ IHQDDLKQNV LLQLLALVAK
801: QPAFHQLRSV EQLGYITVLT QRNDSGVRGL QFIIQSTVKD PSNLDDRVEA FLNMFEGTLY QMPDEEFKSN VNALIDMKLE KYKNIREESA FFWKEISEGT
901: LKFDRKEAEV AALRDLNKEE LIEFFNNHVK VNAPQKKILS IQVYGGLHSS EYEKIVHDEP QPHSYQITDI FSFRRSRPLY GSFKGGVGQM KL
Best Arabidopsis Sequence Match ( AT2G41790.1 )
(BLAST)
001: MAVEKSNTTV GGVEILKPRT DNREYRMIVL KNLLQVLLIS DPDTDKCAAS MSVSVGSFSD PQGLEGLAHF LEHMLFYASE KYPEEDSYSK YITEHGGSTN
101: AYTASEETNY HFDVNADCFD EALDRFAQFF IKPLMSADAT MREIKAVDSE NQKNLLSDGW RIRQLQKHLS KEDHPYHKFS TGNMDTLHVR PQAKGVDTRS
201: ELIKFYEEHY SANIMHLVVY GKESLDKIQD LVERMFQEIQ NTNKVVPRFP GQPCTADHLQ ILVKAIPIKQ GHKLGVSWPV TPSIHHYDEA PSQYLGHLIG
301: HEGEGSLFHA LKTLGWATGL SAGEGEWTLD YSFFKVSIDL TDAGHEHMQE ILGLLFNYIQ LLQQTGVCQW IFDELSAICE TKFHYQDKIP PMSYIVDIAS
401: NMQIYPTKDW LVGSSLPTKF NPAIVQKVVD ELSPSNFRIF WESQKFEGQT DKAEPWYNTA YSLEKITSST IQEWVQSAPD VHLHLPAPNV FIPTDLSLKD
501: ADDKETVPVL LRKTPFSRLW YKPDTMFSKP KAYVKMDFNC PLAVSSPDAA VLTDIFTRLL MDYLNEYAYY AQVAGLYYGV SLSDNGFELT LLGYNHKLRI
601: LLETVVGKIA NFEVKPDRFA VIKETVTKEY QNYKFRQPYH QAMYYCSLIL QDQTWPWTEE LDVLSHLEAE DVAKFVPMLL SRTFIECYIA GNVENNEAES
701: MVKHIEDVLF NDPKPICRPL FPSQHLTNRV VKLGEGMKYF YHQDGSNPSD ENSALVHYIQ VHRDDFSMNI KLQLFGLVAK QATFHQLRTV EQLGYITALA
801: QRNDSGIYGV QFIIQSSVKG PGHIDSRVES LLKNFESKLY EMSNEDFKSN VTALIDMKLE KHKNLKEESR FYWREIQSGT LKFNRKEAEV SALKQLQKQE
901: LIDFFDEYIK VGAARKKSLS IRVYGSQHLK EMASDKDEVP SPSVEIEDIV GFRKSQPLHG SFRGCGQPKL
Arabidopsis Description
PXM16Insulin-degrading enzyme-like 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O22941]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.