Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- extracellular 2
- mitochondrion 2
- nucleus 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012628_P001 | Maize | cytosol | 18.82 | 25.0 |
| PGSC0003DMT400070079 | Potato | cytosol | 20.0 | 23.18 |
| AT3G57470.2 | Thale cress | cytosol | 76.08 | 20.08 |
| AT2G41790.1 | Thale cress | cytosol | 67.45 | 17.73 |
| GSMUA_Achr2P17800_001 | Banana | cytosol | 51.37 | 17.28 |
| Zm00001d012627_P001 | Maize | cytosol | 16.08 | 16.14 |
| VIT_08s0007g08490.t01 | Wine grape | cytosol | 57.25 | 15.13 |
| VIT_08s0007g08480.t01 | Wine grape | cytosol | 55.69 | 14.71 |
| KRH66936 | Soybean | cytosol | 54.51 | 14.42 |
| KRG95264 | Soybean | cytosol | 54.12 | 14.32 |
| HORVU2Hr1G038720.19 | Barley | extracellular | 51.37 | 14.12 |
| Solyc04g015680.2.1 | Tomato | cytosol, extracellular | 52.16 | 13.7 |
| Zm00001d021846_P016 | Maize | cytosol | 52.94 | 13.55 |
| KXG36518 | Sorghum | cytosol | 52.55 | 13.48 |
| Os07t0570300-01 | Rice | plastid | 51.76 | 13.36 |
| Os07t0570500-01 | Rice | cytosol, plasma membrane | 50.98 | 13.18 |
| Os07t0570100-01 | Rice | cytosol, plasma membrane | 50.59 | 13.0 |
| TraesCS2D01G206200.1 | Wheat | cytosol, golgi, unclear | 50.2 | 12.97 |
| TraesCS3A01G318300.2 | Wheat | cytosol | 49.02 | 12.93 |
| EES01562 | Sorghum | cytosol | 49.41 | 12.88 |
| TraesCS2A01G198400.1 | Wheat | cytosol, golgi | 49.8 | 12.87 |
| TraesCS2B01G225800.2 | Wheat | cytosol | 49.8 | 12.87 |
| Os01t0778800-01 | Rice | plasma membrane | 49.02 | 12.85 |
| TraesCS3D01G312900.2 | Wheat | cytosol | 48.63 | 12.84 |
| TraesCS3B01G347600.1 | Wheat | cytosol | 48.24 | 12.72 |
| Zm00001d043274_P008 | Maize | plastid | 48.63 | 12.61 |
| HORVU3Hr1G076480.7 | Barley | cytosol | 47.06 | 12.42 |
| Os01t0779100-00 | Rice | plasma membrane | 40.0 | 11.86 |
| PGSC0003DMT400070070 | Potato | cytosol, nucleus, peroxisome | 25.1 | 11.19 |
| AT1G06900.1 | Thale cress | cytosol | 25.88 | 6.45 |
| KRH15819 | Soybean | extracellular | 3.53 | 5.06 |
| CDY54849 | Canola | cytosol | 2.35 | 3.51 |
| CDY43076 | Canola | cytosol | 9.8 | 3.49 |
| GSMUA_Achr2P17790_001 | Banana | cytosol | 0.78 | 1.08 |
Protein Annotations
| MapMan:19.4.5.4.2 | Gene3D:3.30.830.10 | EntrezGene:824913 | ProteinID:AEE79657.2 | ArrayExpress:AT3G57460 | EnsemblPlantsGene:AT3G57460 |
| RefSeq:AT3G57460 | TAIR:AT3G57460 | RefSeq:AT3G57460-TAIR-G | EnsemblPlants:AT3G57460.1 | TAIR:AT3G57460.1 | UniProt:F4J3D6 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0046872 | InterPro:Metalloenz_LuxS/M16 |
| RefSeq:NP_001319781.1 | PFAM:PF16187 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020038 | PO:PO:0025022 | PANTHER:PTHR43690 |
| PANTHER:PTHR43690:SF7 | InterPro:Peptidase_M16_M | SUPFAM:SSF63411 | UniParc:UPI000848656E | SEG:seg | : |
Description
Catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding protein [Source:UniProtKB/TrEMBL;Acc:F4J3D6]
Coordinates
chr3:-:21262986..21265827
Molecular Weight (calculated)
29019.0 Da
IEP (calculated)
7.491
GRAVY (calculated)
-0.077
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDILGLLFR QIKLLQQSGV SQWIFDELSA IFEAEFHYQA KIDPISYAVN ISSNMTNLLG IKYEGQTDKV EPWYNTAEKI IKFTIQMDFN CPLAVSSPAT
101: VVLSNSSVWL LVDYLNEYAY YAQAARLHYG LSLSDNGFEL SLTGFNHKLR ILLEAVIQKM ANFQVKPDRF SVVKVTVLRE LKKEELINFF DEYTKVGAPK
201: RKSLSVCVYG NQHLKEMSSD KDKVVSTSIE IEDIVGFRNS QPLYASLKGC SQLKL
101: VVLSNSSVWL LVDYLNEYAY YAQAARLHYG LSLSDNGFEL SLTGFNHKLR ILLEAVIQKM ANFQVKPDRF SVVKVTVLRE LKKEELINFF DEYTKVGAPK
201: RKSLSVCVYG NQHLKEMSSD KDKVVSTSIE IEDIVGFRNS QPLYASLKGC SQLKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.