Factsheet for VIT_08s0007g08480.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g08490.t01	Wine grape	cytosol	93.06	93.06
GSMUA_Achr2P17790_001	Banana	cytosol	14.82	76.88
PGSC0003DMT400070070	Potato	cytosol, nucleus, peroxisome	43.94	74.13
KRH66936	Soybean	cytosol	73.78	73.86
KRG95264	Soybean	cytosol	73.78	73.86
AT2G41790.1	Thale cress	cytosol	72.54	72.16
Solyc04g015680.2.1	Tomato	cytosol, extracellular	72.33	71.88
CDY48762	Canola	cytosol	71.4	71.03
Bra004649.1-P	Field mustard	cytosol	70.98	70.62
CDX79914	Canola	cytosol	70.88	70.52
CDX72028	Canola	cytosol	40.52	70.2
AT3G57470.2	Thale cress	cytosol	68.5	68.43
GSMUA_Achr2P17800_001	Banana	cytosol	53.26	67.81
Bra007329.1-P	Field mustard	cytosol	66.74	67.01
CDY06103	Canola	cytosol	67.67	66.84
CDX88949	Canola	cytosol	66.32	65.71
Bra014622.1-P	Field mustard	cytosol	66.11	65.5
TraesCS2D01G206200.1	Wheat	cytosol, golgi, unclear	66.53	65.05
CDY31008	Canola	cytosol	65.49	64.89
TraesCS2A01G198400.1	Wheat	cytosol, golgi	66.32	64.84
Os07t0570300-01	Rice	plastid	66.22	64.68
TraesCS2B01G225800.2	Wheat	cytosol	66.11	64.64
HORVU2Hr1G038720.19	Barley	extracellular	61.76	64.22
KXG36518	Sorghum	cytosol	66.11	64.19
Zm00001d021846_P016	Maize	cytosol	65.8	63.76
CDY61872	Canola	cytosol	64.97	63.4
Os07t0570500-01	Rice	cytosol, plasma membrane	64.66	63.29
Os07t0570100-01	Rice	cytosol, plasma membrane	64.77	63.0
CDY72352	Canola	cytosol, peroxisome	21.87	62.8
Os01t0778800-01	Rice	plasma membrane	59.9	59.4
TraesCS3D01G312900.2	Wheat	cytosol	59.27	59.21
KRH15819	Soybean	extracellular	10.88	58.99
TraesCS3B01G347600.1	Wheat	cytosol	59.07	58.95
TraesCS3A01G318300.2	Wheat	cytosol	58.86	58.74
CDY33819	Canola	cytosol, extracellular	59.07	58.7
EES01562	Sorghum	cytosol	59.48	58.69
HORVU3Hr1G076480.7	Barley	cytosol	57.82	57.76
Os01t0779100-00	Rice	plasma membrane	51.09	57.33
Zm00001d043274_P008	Maize	plastid	58.13	57.07
AT3G57460.1	Thale cress	cytosol, extracellular	14.71	55.69
Zm00001d012627_P001	Maize	cytosol	13.68	51.97
Zm00001d012628_P001	Maize	cytosol	9.84	49.48
CDY33824	Canola	extracellular	4.66	34.35
VIT_06s0004g07990.t01	Wine grape	cytosol	31.92	29.0
CDY54849	Canola	cytosol	4.15	23.39
CDY43076	Canola	cytosol	14.61	19.67

Protein Annotations

EntrezGene:100246976	wikigene:100246976	MapMan:19.4.5.4.2	Gene3D:3.30.830.10	ProteinID:CBI29844	ProteinID:CBI29844.3
UniProt:D7THW8	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0004222	GO:GO:0005488
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872
EntrezGene:LOC100246976	wikigene:LOC100246976	MEROPS:M16.017	MEROPS:M16.A02	InterPro:Metalloenz_LuxS/M16	PFAM:PF00675
PFAM:PF05193	PFAM:PF16187	ScanProsite:PS00143	PANTHER:PTHR43690	PANTHER:PTHR43690:SF7	InterPro:Pept_M16_N
InterPro:Pept_M16_Zn_BS	InterPro:Peptidase_M16_C	InterPro:Peptidase_M16_M	SUPFAM:SSF63411	UniParc:UPI00015CADE7	ArrayExpress:VIT_08s0007g08480
EnsemblPlantsGene:VIT_08s0007g08480	EnsemblPlants:VIT_08s0007g08480.t01	unigene:Vvi.12301	RefSeq:XP_010653779.1	:	:

Description

No Description!

Coordinates

chr8:+:21832245..21876891

Molecular Weight (calculated)

111180.0 Da

IEP (calculated)

5.926

GRAVY (calculated)

-0.312

Length

965 amino acids

Sequence
(BLAST)

001: MGEAAVEIVK PRTDTREYRR IVLRNSLEAL LISDPDTDKA AASMSVSVGS FSDPEGFPGL AHFLEHMLFY ASEKYPLEDS YSKYITEHGG STNAFTASEH
101: TNYFFDVNTD CFEEALDRFA QFFVKPLMSA DATTREIKAV DSENKKNLLS DAWRMDQLQK HVSAEGHPYH KFSTGNRDTL EVKPKEKGLD TRHELIKFYE
201: EHYSANLMHL VVYTKESLDK IQSLVEHKFQ EIQNKDRINF HICGQPCTSE HLQILVKTVP IKQGHKLIVV WPITPSIHNY KEGPCRYLGH LIGHEGKGSL
301: FYILKTLGWA TSLSAWEEDW TCEFSFFEVV IDLTDAGHEH MQDIVGLLFK YISLLQQTGV CKWIFDELSA ICETMFHYQD KIPSIDYVVN VSSNMELYPP
401: KDWLVGSSLP SKFSPDVIQK VLDELAPNNV RIFWESKNFE GHTDMVEPWY GTAFSIEKIT VSMIQQWMLA APTEHLHLPD PNDFIPTDLS LKNVQEKAKF
501: PVLLRKSSYS TLWYKPDTMF STPKAYVKID FNCPFASSSP EADVLTDIFT RLLMDYLNED AYYAEVAGLY YCLSNTDSGF QVAMAGYNHK LRILLETVVK
601: KIANFKVKPD RFLVIKELVT KGYQNVKFQQ PYQQAMCYRS LILHDNTWPW MDGLEVIPHL EADDLAKFVP MLLSRAFLEC YIAGNIEPKE AEAMIHHIED
701: IFYSGPRPIC QPLFPSQYLT NRVIKLDRGM SYFYPAEGLN PSDENSALVH YIQVHRDDFL PNVKLQLFAL IAKQQAFHQL RSVEQLGYIT ELMLRNDSGI
801: HGVQFMIQST VKGPGHIDSR IEEFLKMFEF KLYAMSEDEF KSNVNTLVDM KLEKYKNLWE ESGFYWQEIY DGTLKFDRTE AEVAALKKLT QKELIDFFNE
901: HIKVGAPQKK TLSVRVYGCL HTSEYAEEQK EANQPIQVKI DDIFKFRKSQ PLYGSFKGGL GHVKL

Best Arabidopsis Sequence Match ( AT2G41790.1 )
(BLAST)

001: MAVEKSNTTV GGVEILKPRT DNREYRMIVL KNLLQVLLIS DPDTDKCAAS MSVSVGSFSD PQGLEGLAHF LEHMLFYASE KYPEEDSYSK YITEHGGSTN
101: AYTASEETNY HFDVNADCFD EALDRFAQFF IKPLMSADAT MREIKAVDSE NQKNLLSDGW RIRQLQKHLS KEDHPYHKFS TGNMDTLHVR PQAKGVDTRS
201: ELIKFYEEHY SANIMHLVVY GKESLDKIQD LVERMFQEIQ NTNKVVPRFP GQPCTADHLQ ILVKAIPIKQ GHKLGVSWPV TPSIHHYDEA PSQYLGHLIG
301: HEGEGSLFHA LKTLGWATGL SAGEGEWTLD YSFFKVSIDL TDAGHEHMQE ILGLLFNYIQ LLQQTGVCQW IFDELSAICE TKFHYQDKIP PMSYIVDIAS
401: NMQIYPTKDW LVGSSLPTKF NPAIVQKVVD ELSPSNFRIF WESQKFEGQT DKAEPWYNTA YSLEKITSST IQEWVQSAPD VHLHLPAPNV FIPTDLSLKD
501: ADDKETVPVL LRKTPFSRLW YKPDTMFSKP KAYVKMDFNC PLAVSSPDAA VLTDIFTRLL MDYLNEYAYY AQVAGLYYGV SLSDNGFELT LLGYNHKLRI
601: LLETVVGKIA NFEVKPDRFA VIKETVTKEY QNYKFRQPYH QAMYYCSLIL QDQTWPWTEE LDVLSHLEAE DVAKFVPMLL SRTFIECYIA GNVENNEAES
701: MVKHIEDVLF NDPKPICRPL FPSQHLTNRV VKLGEGMKYF YHQDGSNPSD ENSALVHYIQ VHRDDFSMNI KLQLFGLVAK QATFHQLRTV EQLGYITALA
801: QRNDSGIYGV QFIIQSSVKG PGHIDSRVES LLKNFESKLY EMSNEDFKSN VTALIDMKLE KHKNLKEESR FYWREIQSGT LKFNRKEAEV SALKQLQKQE
901: LIDFFDEYIK VGAARKKSLS IRVYGSQHLK EMASDKDEVP SPSVEIEDIV GFRKSQPLHG SFRGCGQPKL

Arabidopsis Description

PXM16Insulin-degrading enzyme-like 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O22941]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.