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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
TargetP:secretory
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G206200.1 Wheat cytosol, golgi, unclear 95.8 90.07
TraesCS2B01G225800.2 Wheat cytosol 94.94 89.26
TraesCS2A01G198400.1 Wheat cytosol, golgi 94.94 89.26
Os07t0570300-01 Rice plastid 83.3 78.24
KXG36518 Sorghum cytosol 82.44 76.96
Zm00001d021846_P016 Maize cytosol 82.0 76.41
Os07t0570500-01 Rice cytosol, plasma membrane 80.93 76.17
Os07t0570100-01 Rice cytosol, plasma membrane 80.93 75.71
GSMUA_Achr2P17800_001 Banana cytosol 55.06 67.41
CDX72028 Canola cytosol 38.25 63.73
VIT_08s0007g08490.t01 Wine grape cytosol 65.95 63.42
VIT_08s0007g08480.t01 Wine grape cytosol 64.22 61.76
KRH66936 Soybean cytosol 63.47 61.1
KRG95264 Soybean cytosol 63.25 60.89
PGSC0003DMT400070070 Potato cytosol, nucleus, peroxisome 37.39 60.66
Solyc04g015680.2.1 Tomato cytosol, extracellular 62.82 60.04
AT2G41790.1 Thale cress cytosol 61.85 59.18
CDY48762 Canola cytosol 61.42 58.76
Bra004649.1-P Field mustard cytosol 61.21 58.56
CDX79914 Canola cytosol 61.1 58.45
Solyc04g015690.2.1 Tomato cytosol 59.05 56.21
GSMUA_Achr2P17790_001 Banana cytosol 11.21 55.91
AT3G57470.2 Thale cress cytosol 58.19 55.9
HORVU3Hr1G076480.7 Barley cytosol 58.08 55.8
Bra007329.1-P Field mustard cytosol 57.54 55.57
CDY06103 Canola cytosol 58.41 55.48
CDX88949 Canola cytosol 57.33 54.62
PGSC0003DMT400070079 Potato cytosol 12.93 54.55
Bra014622.1-P Field mustard cytosol 57.11 54.41
CDY31008 Canola cytosol 56.57 53.9
CDY61872 Canola cytosol 57.0 53.49
CDY72352 Canola cytosol, peroxisome 18.97 52.38
PGSC0003DMT400070080 Potato peroxisome 19.83 51.54
AT3G57460.1 Thale cress cytosol, extracellular 14.12 51.37
KRH15819 Soybean extracellular 9.81 51.12
CDY33819 Canola cytosol, extracellular 53.34 50.98
CDY33824 Canola extracellular 4.63 32.82
HORVU4Hr1G050160.2 Barley cytosol 29.31 24.05
CDY54849 Canola cytosol 3.88 21.05
CDY43076 Canola cytosol 15.09 19.53
Protein Annotations
EnsemblPlants:HORVU2Hr1G038720.19EnsemblPlantsGene:HORVU2Hr1G038720Gene3D:3.30.830.10GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0046872InterPro:Metalloenz_LuxS/M16InterPro:Pept_M16_NInterPro:Peptidase_M16_CInterPro:Peptidase_M16_MPANTHER:PTHR43690
PANTHER:PTHR43690:SF7PFAM:PF00675PFAM:PF05193PFAM:PF16187SignalP:SignalP-noTMSUPFAM:SSF63411
TMHMM:TMhelixUniParc:UPI000B47BFECUniProt:A0A287HRA7MapMan:19.4.5.4.2::
Description
No Description!
Coordinates
chrchr2H:-:183381161..183409931
Molecular Weight (calculated)
106681.0 Da
IEP (calculated)
5.950
GRAVY (calculated)
-0.327
Length
928 amino acids
Sequence
(BLAST)
001: HVCSGTSVWV FVHFLICNTL MTGSTFTEHM LFYASEKYPI EDSYSKYIAE HGGSTNAFTT SEHTNFYFDV NNDSLDDALD RFAQFFIKPL MSPDATLREI
101: KAVDSENQKN LLSDPWRMSQ LQKHLCSNNH PYHKFSTGNW DTLEVKPKEK GLDTRAELIN FYDSHYSANL MQLVVYGKDS LDNIQTLVES KFCDIKNVGR
201: KHFSFPGHPC SSKDLQILVK AVPIKQGHTL RILWPITPNV RHYKEGPCKY VSHLIGHEGE GSLFYILKKL GWAMSLEAGE GDWSYEFSFF SVVIQLTDVG
301: QEHMEDVVGL LFRYITLLQT SGTPKWIFDE LLSICETGFH YRDKSPPMNY VVNISSNMQI FPPEDWLIAS SVPSKFSPDA IQKVLNELTT ENVRIFWESK
401: LFEGQTDLTE PWYGTSYSVE AVPPSIMQKW VENAPNEDLH LPKPNIFIPT DLSLKNVEEK ASFPCMLRKT PFSRLWYKPD TMFFTPKVFI KMDFHCPLSN
501: SSPESSVLTD VFTRLLTDYL NDYAYDAEVA GLYYAVRPND TGFQVTMVGY NDKMRTLLDT VIGKIADFEV KIDRFSVIKE TITKGYENFK FRQPYQQAMY
601: NCTLILEEQT WPWDEELAAL SNLEARNLED FLPRMLAKTF IECYFAGNIE PSEAESVVQH IEGTLFNSST SVCKSLPPSQ HLTKRIVKLE RGLRYYYPAM
701: CLNQQDENSS LLHYIQIHQD DLKQNVLLEL LAVVAKQPAF HQLRSVEQLG YIALLRQRND SGVRGLQFII QSTVKDPSNL DARVEAFLKM FEVTLHEMPD
801: AEFKSNVNAV IDMKREKYKN IREESAFFWG EISQGTLKFD RKEAEVAALG ELKKEELIEF FDNYVKVGAP EKKILSIQIY GGLHASEYEK IVHDVPPPHS
901: HRITDIFSFR RSRPLYGSFK GGAGQMKL
Best Arabidopsis Sequence Match ( AT2G41790.1 )
(BLAST)
001: MAVEKSNTTV GGVEILKPRT DNREYRMIVL KNLLQVLLIS DPDTDKCAAS MSVSVGSFSD PQGLEGLAHF LEHMLFYASE KYPEEDSYSK YITEHGGSTN
101: AYTASEETNY HFDVNADCFD EALDRFAQFF IKPLMSADAT MREIKAVDSE NQKNLLSDGW RIRQLQKHLS KEDHPYHKFS TGNMDTLHVR PQAKGVDTRS
201: ELIKFYEEHY SANIMHLVVY GKESLDKIQD LVERMFQEIQ NTNKVVPRFP GQPCTADHLQ ILVKAIPIKQ GHKLGVSWPV TPSIHHYDEA PSQYLGHLIG
301: HEGEGSLFHA LKTLGWATGL SAGEGEWTLD YSFFKVSIDL TDAGHEHMQE ILGLLFNYIQ LLQQTGVCQW IFDELSAICE TKFHYQDKIP PMSYIVDIAS
401: NMQIYPTKDW LVGSSLPTKF NPAIVQKVVD ELSPSNFRIF WESQKFEGQT DKAEPWYNTA YSLEKITSST IQEWVQSAPD VHLHLPAPNV FIPTDLSLKD
501: ADDKETVPVL LRKTPFSRLW YKPDTMFSKP KAYVKMDFNC PLAVSSPDAA VLTDIFTRLL MDYLNEYAYY AQVAGLYYGV SLSDNGFELT LLGYNHKLRI
601: LLETVVGKIA NFEVKPDRFA VIKETVTKEY QNYKFRQPYH QAMYYCSLIL QDQTWPWTEE LDVLSHLEAE DVAKFVPMLL SRTFIECYIA GNVENNEAES
701: MVKHIEDVLF NDPKPICRPL FPSQHLTNRV VKLGEGMKYF YHQDGSNPSD ENSALVHYIQ VHRDDFSMNI KLQLFGLVAK QATFHQLRTV EQLGYITALA
801: QRNDSGIYGV QFIIQSSVKG PGHIDSRVES LLKNFESKLY EMSNEDFKSN VTALIDMKLE KHKNLKEESR FYWREIQSGT LKFNRKEAEV SALKQLQKQE
901: LIDFFDEYIK VGAARKKSLS IRVYGSQHLK EMASDKDEVP SPSVEIEDIV GFRKSQPLHG SFRGCGQPKL
Arabidopsis Description
PXM16Insulin-degrading enzyme-like 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O22941]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.