Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G135700.2 Wheat cytosol 88.24 96.43
TraesCS4D01G171500.1 Wheat cytosol 83.73 96.34
TraesCS4B01G169500.2 Wheat cytosol 87.18 95.54
Os03t0336300-01 Rice plasma membrane 77.01 83.75
Zm00001d047518_P004 Maize nucleus 76.22 83.2
KXG39425 Sorghum nucleus 75.42 82.5
GSMUA_Achr9P04800_001 Banana cytosol 61.27 66.63
Solyc02g043860.2.1 Tomato cytosol 47.75 58.57
AT1G06900.1 Thale cress cytosol 52.79 58.3
CDY09948 Canola cytosol 48.1 57.44
CDY10234 Canola cytosol 49.43 57.39
Bra030665.1-P Field mustard cytosol 49.43 57.27
VIT_06s0004g07990.t01 Wine grape cytosol 53.67 57.16
CDX86509 Canola cytosol 34.84 57.1
CDY15592 Canola cytosol 35.1 56.55
KRG98151 Soybean nucleus 54.64 55.68
Bra015536.1-P Field mustard cytosol 50.04 55.54
KRH30120 Soybean cytosol, mitochondrion, plastid 54.29 55.02
CDY54887 Canola cytosol 49.25 54.77
Bra031544.1-P Field mustard nucleus 12.38 40.35
CDY06238 Canola nucleus 9.02 33.12
HORVU3Hr1G076480.7 Barley cytosol 26.88 31.47
HORVU2Hr1G038720.19 Barley extracellular 24.05 29.31
Protein Annotations
MapMan:19.4.5.4.2Gene3D:3.30.830.10UniProt:A0A287P0S2ncoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0004222GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005829GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538
GO:GO:0046872EnsemblPlantsGene:HORVU4Hr1G050160EnsemblPlants:HORVU4Hr1G050160.2InterPro:Metalloenz_LuxS/M16PFAM:PF00675PFAM:PF05193
PFAM:PF16187ScanProsite:PS00143PANTHER:PTHR43690PANTHER:PTHR43690:SF1InterPro:Pept_M16_NInterPro:Pept_M16_Zn_BS
InterPro:Peptidase_M16_CInterPro:Peptidase_M16_MSUPFAM:SSF63411UniParc:UPI000B47977FSEG:seg:
Description
No Description!
Coordinates
chrchr4H:-:407518210..407530301
Molecular Weight (calculated)
129203.0 Da
IEP (calculated)
4.739
GRAVY (calculated)
-0.432
Length
1131 amino acids
Sequence
(BLAST)
0001: NALACCVGSD SLIQIVGQSF VTLNKQNQDI NQGNRRGGPR CYCRRIPISH HLRPSLLRTH RRRRTAEMAA AVSRDDELVV KSPTDNRSYR LLRLANGLCA
0101: LLIHDPEIYA DGGPAPKPNE DLDMDDGDDE EDDDEDDEED DEEYSDEDGE DDDDEEEGEE DEDGSEPKRK KEKGSSEPVI KKAAAAVCVG MGSFADPPKA
0201: QGLAHFLEHM LFMGSSVFPD ENEYDSYLSK HGGSSNAFTE TEYTCYHFEV NREYLKGALD RFSQFFVSPL VKAEAMDREI LAVDSEFNQV LQSDSCRLYQ
0301: LQSHTCSQGH PLNRFTWGML IIWLFYCHDR YPLNYTGAEL LRLSVGNKKS LSNAMGSGIN LREEILQMYM SNYHGGMMKL VIIGGEPLDT LEAWTMELFS
0401: EVKAGPLLEI SPKTDMPFWK SGKLYKLEAV RDVHSLFLSW TLPCLHKEYM KKPEDYLAHL LGHEGKGSLL YFLKAKGWAS TLSAGVGTGG TQRSSYAYIF
0501: EMSIRLSDSG LKNLFEVITA VYQYINLLKQ SEPQEWIFKE LQDIGYMEFR FAEEQPPDDY VVDLAENMLF YSEKHIISGE YIYEGWEPEL VKHVLSFFHP
0601: DNMRVDILSR SFDKQSQAIR CEPWFGSQYI EEDIPSSLIE SWRNPVEIDG NFHLPRKNEY IPGDFSLRNA SIPKSSNDDN PRCIVDEPFI KLWHKMDITF
0701: NVPRANAYFL ISVKDGCSSL RNSVLTDLFA NLLKDELNEV LYQAYVAKLE TSLSVVGSNL ELKLYGYNDK LAILLSHILA ASQSFSPKID RFEVIKEDLE
0801: RAYRNTNMKP MSHSTYLRLQ FLRQIFWDVN EKLKVLAMLT FSDLAAFVPE LLSQLHIEGL CHGNLSGEEA INISNIFRNT LSGQTLSVEA RHGERVFCIP
0901: HGANFIRSVR VKNDLEENSV VEVYYPVEQD IGKESTRLRA ITDLFSNIIE EPCFDQLRTK EQLGYTVDSS PRMTYRLLAY CFRVMSSKHS PVYLQSRIDN
1001: FIDGLSALLD GLEEETFEHH KSGLIAQKLE KDPSLSYQTG DYWSQITDKR YMFDMAKLEA EELRTVGKED VISWYNTYIR SSSPTRRRLA IHVYGCNSDI
1101: AEAAKLQEQS WTAIDDVESL KVSSQFYPNL C
Best Arabidopsis Sequence Match ( AT1G06900.1 )
(BLAST)
0001: MSSMKSVSAL DNVVVKSPND RRLYRVIELE NGLCALLIHD PDIYPEGSVP DQIDEDDEDG EEEDSDGSSE DDDDDEDDEE DGEGDEEDED EDEDEVKGKG
0101: DHQTKKAAAA MCVSMGSFLD PPEAQGLAHF LEHMLFMGST EFPDENEYDS YLSKHGGSSN AYTEMEHTCY HFEVKREFLQ GALKRFSQFF VAPLMKTEAM
0201: EREVLAVDSE FNQALQNDAC RLQQLQCYTS AKGHPFNRFA WGNKKSLSGA MENGVDLREC IVKLYKEYYH GGLMKLVVIG GESLDMLESW VVELFGDVKN
0301: GSKIRPTLEA EGPIWKGGKL YRLEAVKDVH ILDLTWTLPP LRSAYVKKPE DYLAHLLGHE GRGSLHSFLK AKGWATSLSA GVGDDGINRS SLAYVFGMSI
0401: HLTDSGLEKI YDIIGYIYQY LKLLRDVSPQ EWIFKELQDI GNMDFRFAEE QPADDYAAEL SENMLAYPVE HVIYGDYVYQ TWDPKLIEDL MGFFTPQNMR
0501: IDVVSKSIKS EEFQQEPWFG SSYIEEDVPL SLMESWSNPS EVDNSLHLPS KNQFIPCDFS IRAINSDVDP KSQSPPRCII DEPFMKFWYK LDETFKVPRA
0601: NTYFRINLKG AYASVKNCLL TELYINLLKD ELNEIIYQAS IAKLETSLSM YGDKLELKVY GFNEKIPALL SKILAIAKSF MPNLERFKVI KENMERGFRN
0701: TNMKPLNHST YLRLQLLCKR IYDSDEKLSV LNDLSLDDLN SFIPELRSQI FIEALCHGNL SEDEAVNISN IFKDSLTVEP LPSKCRHGEQ ITCFPMGAKL
0801: VRDVNVKNKS ETNSVVELYY QIEPEEAQST RTKAVLDLFH EIIEEPLFNQ LRTKEQLGYV VECGPRLTYR VHGFCFCVQS SKYGPVHLLG RVDNFIKDIE
0901: GLLEQLDDES YEDYRSGMIA RLLEKDPSLL SETNDLWSQI VDKRYMFDFS HKEAEELRSI QKKDVISWYK TYFRESSPKC RRLAVRVWGC DTNMKETQTD
1001: QKAVQVIADA VAFKSTSKFY PSLC
Arabidopsis Description
Nardilysin-like [Source:UniProtKB/Swiss-Prot;Acc:F4HNU6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.