Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G135700.2 | Wheat | cytosol | 98.17 | 93.24 |
| TraesCS4B01G169500.2 | Wheat | cytosol | 95.52 | 90.99 |
| HORVU4Hr1G050160.2 | Barley | cytosol | 96.34 | 83.73 |
| Os03t0336300-01 | Rice | plasma membrane | 84.44 | 79.81 |
| Zm00001d047518_P004 | Maize | nucleus | 82.5 | 78.28 |
| KXG39425 | Sorghum | nucleus | 82.2 | 78.14 |
| GSMUA_Achr9P04800_001 | Banana | cytosol | 66.33 | 62.69 |
| CDX86509 | Canola | cytosol | 40.18 | 57.25 |
| AT1G06900.1 | Thale cress | cytosol | 59.31 | 56.93 |
| CDY15592 | Canola | cytosol | 40.39 | 56.55 |
| Solyc02g043860.2.1 | Tomato | cytosol | 52.49 | 55.97 |
| CDY10234 | Canola | cytosol | 54.73 | 55.24 |
| VIT_06s0004g07990.t01 | Wine grape | cytosol | 59.61 | 55.18 |
| Bra030665.1-P | Field mustard | cytosol | 54.73 | 55.12 |
| CDY09948 | Canola | cytosol | 52.9 | 54.91 |
| KRG98151 | Soybean | nucleus | 60.33 | 53.42 |
| Bra015536.1-P | Field mustard | cytosol | 55.24 | 53.29 |
| KRH30120 | Soybean | cytosol, mitochondrion, plastid | 60.22 | 53.05 |
| CDY54887 | Canola | cytosol | 54.73 | 52.9 |
| Bra031544.1-P | Field mustard | nucleus | 13.94 | 39.48 |
| TraesCS3D01G312900.2 | Wheat | cytosol | 31.33 | 31.88 |
| CDY06238 | Canola | nucleus | 9.97 | 31.82 |
| TraesCS2D01G206200.1 | Wheat | cytosol, golgi, unclear | 29.4 | 29.28 |
Protein Annotations
| MapMan:19.4.5.4.2 | Gene3D:3.30.830.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004222 |
| GO:GO:0005488 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0046872 | InterPro:Metalloenz_LuxS/M16 | PFAM:PF00675 | PFAM:PF05193 | PFAM:PF16187 | ScanProsite:PS00143 |
| PANTHER:PTHR43690 | PANTHER:PTHR43690:SF1 | InterPro:Pept_M16_N | InterPro:Pept_M16_Zn_BS | InterPro:Peptidase_M16_C | InterPro:Peptidase_M16_M |
| SUPFAM:SSF63411 | EnsemblPlantsGene:TraesCS4D01G171500 | EnsemblPlants:TraesCS4D01G171500.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4D:-:298239017..298251723
Molecular Weight (calculated)
111631.0 Da
IEP (calculated)
4.500
GRAVY (calculated)
-0.427
Length
983 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAVSRDDE LVVKSPSDNR SYRLLRLANG LCALLIHDPE IYADGGPAPK PNEDVDMDDG DDEEEDDEDD EEDDEEYSDE DGEDDDDEEG EEDEDGSEPK
101: RKKDKGSSEP VIKKAAAAVC VGMGSFADPP KAQGLAHFLE HMLFMGSSVF PDENEYDSYL SKHGGSSNAF TETEYTCYHF EVNREYLKGA LDRFSQFFVS
201: PLVKAEAMDR EILAVDSEFN QVLQSDSCRL YQLQSHTCSQ GHPLNRFTWG NKKSLSNAMG SGINLREEIL QMYMSNYHGG MMKLVIIGGE PLDTLEAWTM
301: ELFSEVKAGP LLEISPKTDM PFWKSGKLYK LEAVRDVHSL FLSWTLPCLH KEYMKKPEDY LAHLLGHEGK GSLLYFLKAK GWASTLSAGV GTGGTQRSSY
401: AYIFEMSIRL SDSGLKNLFE VITAVYQYIN LLKQSEPQEW IFKELQDIGY MEFRFAEEQP PDDYVVDLAA IRCEPWFGSQ YIEEDIPSSL IESWRNPVEI
501: DGNFHLPRKN EYIPGDFSLR NASIPKSSND DNPRCIVDEP FIKLWHKMDI TFNVPRANAY FLISVKDGCS SLRNSVLTDL FANLLKDELN EVLYQAYVAK
601: LETSLSVVGS NLELKLYGYN DKLAILLSHI LAASQSFSPK IDRFEVIKED LERAYRNTNM KPMSHSTYLR LQFLRQIFWD VNEKLKVLAT LTFSDLAAFV
701: PELLSQLHIE GLCHGNLSGD EAINISKIFQ NTLSGQTLSV EARHGERVLC IPHGANFIRS VRVKNDLEEN SVVEVYFPVE QDIGKDSTRL RAITDLFSNI
801: IEEPCFDQLR TKEQLGYTVD SSPRMTYRLL AYCFRVMSSK YSPVYLQSRI DNFIDGLSAL LDGLEEETFE HHKSGLIAQK LEKDPSLSYQ TGDYWSQITD
901: KRYMFDMSKL EAEELRTVGK EDVISWYNAY IRSSSPTRRR LAIHVYGCNS DIAEAAKLQE QSWTAIDDVE SLKGSSQFYP SLC
101: RKKDKGSSEP VIKKAAAAVC VGMGSFADPP KAQGLAHFLE HMLFMGSSVF PDENEYDSYL SKHGGSSNAF TETEYTCYHF EVNREYLKGA LDRFSQFFVS
201: PLVKAEAMDR EILAVDSEFN QVLQSDSCRL YQLQSHTCSQ GHPLNRFTWG NKKSLSNAMG SGINLREEIL QMYMSNYHGG MMKLVIIGGE PLDTLEAWTM
301: ELFSEVKAGP LLEISPKTDM PFWKSGKLYK LEAVRDVHSL FLSWTLPCLH KEYMKKPEDY LAHLLGHEGK GSLLYFLKAK GWASTLSAGV GTGGTQRSSY
401: AYIFEMSIRL SDSGLKNLFE VITAVYQYIN LLKQSEPQEW IFKELQDIGY MEFRFAEEQP PDDYVVDLAA IRCEPWFGSQ YIEEDIPSSL IESWRNPVEI
501: DGNFHLPRKN EYIPGDFSLR NASIPKSSND DNPRCIVDEP FIKLWHKMDI TFNVPRANAY FLISVKDGCS SLRNSVLTDL FANLLKDELN EVLYQAYVAK
601: LETSLSVVGS NLELKLYGYN DKLAILLSHI LAASQSFSPK IDRFEVIKED LERAYRNTNM KPMSHSTYLR LQFLRQIFWD VNEKLKVLAT LTFSDLAAFV
701: PELLSQLHIE GLCHGNLSGD EAINISKIFQ NTLSGQTLSV EARHGERVLC IPHGANFIRS VRVKNDLEEN SVVEVYFPVE QDIGKDSTRL RAITDLFSNI
801: IEEPCFDQLR TKEQLGYTVD SSPRMTYRLL AYCFRVMSSK YSPVYLQSRI DNFIDGLSAL LDGLEEETFE HHKSGLIAQK LEKDPSLSYQ TGDYWSQITD
901: KRYMFDMSKL EAEELRTVGK EDVISWYNAY IRSSSPTRRR LAIHVYGCNS DIAEAAKLQE QSWTAIDDVE SLKGSSQFYP SLC
0001: MSSMKSVSAL DNVVVKSPND RRLYRVIELE NGLCALLIHD PDIYPEGSVP DQIDEDDEDG EEEDSDGSSE DDDDDEDDEE DGEGDEEDED EDEDEVKGKG
0101: DHQTKKAAAA MCVSMGSFLD PPEAQGLAHF LEHMLFMGST EFPDENEYDS YLSKHGGSSN AYTEMEHTCY HFEVKREFLQ GALKRFSQFF VAPLMKTEAM
0201: EREVLAVDSE FNQALQNDAC RLQQLQCYTS AKGHPFNRFA WGNKKSLSGA MENGVDLREC IVKLYKEYYH GGLMKLVVIG GESLDMLESW VVELFGDVKN
0301: GSKIRPTLEA EGPIWKGGKL YRLEAVKDVH ILDLTWTLPP LRSAYVKKPE DYLAHLLGHE GRGSLHSFLK AKGWATSLSA GVGDDGINRS SLAYVFGMSI
0401: HLTDSGLEKI YDIIGYIYQY LKLLRDVSPQ EWIFKELQDI GNMDFRFAEE QPADDYAAEL SENMLAYPVE HVIYGDYVYQ TWDPKLIEDL MGFFTPQNMR
0501: IDVVSKSIKS EEFQQEPWFG SSYIEEDVPL SLMESWSNPS EVDNSLHLPS KNQFIPCDFS IRAINSDVDP KSQSPPRCII DEPFMKFWYK LDETFKVPRA
0601: NTYFRINLKG AYASVKNCLL TELYINLLKD ELNEIIYQAS IAKLETSLSM YGDKLELKVY GFNEKIPALL SKILAIAKSF MPNLERFKVI KENMERGFRN
0701: TNMKPLNHST YLRLQLLCKR IYDSDEKLSV LNDLSLDDLN SFIPELRSQI FIEALCHGNL SEDEAVNISN IFKDSLTVEP LPSKCRHGEQ ITCFPMGAKL
0801: VRDVNVKNKS ETNSVVELYY QIEPEEAQST RTKAVLDLFH EIIEEPLFNQ LRTKEQLGYV VECGPRLTYR VHGFCFCVQS SKYGPVHLLG RVDNFIKDIE
0901: GLLEQLDDES YEDYRSGMIA RLLEKDPSLL SETNDLWSQI VDKRYMFDFS HKEAEELRSI QKKDVISWYK TYFRESSPKC RRLAVRVWGC DTNMKETQTD
1001: QKAVQVIADA VAFKSTSKFY PSLC
0101: DHQTKKAAAA MCVSMGSFLD PPEAQGLAHF LEHMLFMGST EFPDENEYDS YLSKHGGSSN AYTEMEHTCY HFEVKREFLQ GALKRFSQFF VAPLMKTEAM
0201: EREVLAVDSE FNQALQNDAC RLQQLQCYTS AKGHPFNRFA WGNKKSLSGA MENGVDLREC IVKLYKEYYH GGLMKLVVIG GESLDMLESW VVELFGDVKN
0301: GSKIRPTLEA EGPIWKGGKL YRLEAVKDVH ILDLTWTLPP LRSAYVKKPE DYLAHLLGHE GRGSLHSFLK AKGWATSLSA GVGDDGINRS SLAYVFGMSI
0401: HLTDSGLEKI YDIIGYIYQY LKLLRDVSPQ EWIFKELQDI GNMDFRFAEE QPADDYAAEL SENMLAYPVE HVIYGDYVYQ TWDPKLIEDL MGFFTPQNMR
0501: IDVVSKSIKS EEFQQEPWFG SSYIEEDVPL SLMESWSNPS EVDNSLHLPS KNQFIPCDFS IRAINSDVDP KSQSPPRCII DEPFMKFWYK LDETFKVPRA
0601: NTYFRINLKG AYASVKNCLL TELYINLLKD ELNEIIYQAS IAKLETSLSM YGDKLELKVY GFNEKIPALL SKILAIAKSF MPNLERFKVI KENMERGFRN
0701: TNMKPLNHST YLRLQLLCKR IYDSDEKLSV LNDLSLDDLN SFIPELRSQI FIEALCHGNL SEDEAVNISN IFKDSLTVEP LPSKCRHGEQ ITCFPMGAKL
0801: VRDVNVKNKS ETNSVVELYY QIEPEEAQST RTKAVLDLFH EIIEEPLFNQ LRTKEQLGYV VECGPRLTYR VHGFCFCVQS SKYGPVHLLG RVDNFIKDIE
0901: GLLEQLDDES YEDYRSGMIA RLLEKDPSLL SETNDLWSQI VDKRYMFDFS HKEAEELRSI QKKDVISWYK TYFRESSPKC RRLAVRVWGC DTNMKETQTD
1001: QKAVQVIADA VAFKSTSKFY PSLC
Arabidopsis Description
Nardilysin-like [Source:UniProtKB/Swiss-Prot;Acc:F4HNU6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.