Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10234 | Canola | cytosol | 83.4 | 87.68 |
| Bra030665.1-P | Field mustard | cytosol | 82.62 | 86.68 |
| CDY09948 | Canola | cytosol | 79.3 | 85.74 |
| CDX86509 | Canola | cytosol | 57.62 | 85.51 |
| Bra015536.1-P | Field mustard | cytosol | 84.77 | 85.18 |
| CDY15592 | Canola | cytosol | 57.91 | 84.47 |
| CDY54887 | Canola | cytosol | 82.52 | 83.09 |
| VIT_06s0004g07990.t01 | Wine grape | cytosol | 66.89 | 64.5 |
| Solyc02g043860.2.1 | Tomato | cytosol | 57.81 | 64.21 |
| KRG98151 | Soybean | nucleus | 68.26 | 62.97 |
| KRH30120 | Soybean | cytosol, mitochondrion, plastid | 68.26 | 62.63 |
| GSMUA_Achr9P04800_001 | Banana | cytosol | 61.91 | 60.96 |
| TraesCS4D01G171500.1 | Wheat | cytosol | 56.93 | 59.31 |
| TraesCS4A01G135700.2 | Wheat | cytosol | 59.08 | 58.45 |
| Os03t0336300-01 | Rice | plasma membrane | 58.98 | 58.08 |
| TraesCS4B01G169500.2 | Wheat | cytosol | 58.2 | 57.75 |
| KXG39425 | Sorghum | nucleus | 58.3 | 57.74 |
| Zm00001d047518_P004 | Maize | nucleus | 58.4 | 57.72 |
| HORVU4Hr1G050160.2 | Barley | cytosol | 58.3 | 52.79 |
| AT3G57470.2 | Thale cress | cytosol | 30.47 | 32.3 |
| AT2G41790.1 | Thale cress | cytosol | 29.88 | 31.55 |
| AT3G57460.1 | Thale cress | cytosol, extracellular | 6.45 | 25.88 |
Protein Annotations
| MapMan:19.4.5.4.2 | Gene3D:3.30.830.10 | EntrezGene:837200 | UniProt:A0A178WD59 | ProteinID:AAF63132.1 | ProteinID:AEE28051.1 |
| EMBL:AK229304 | ArrayExpress:AT1G06900 | EnsemblPlantsGene:AT1G06900 | RefSeq:AT1G06900 | TAIR:AT1G06900 | RefSeq:AT1G06900-TAIR-G |
| EnsemblPlants:AT1G06900.1 | TAIR:AT1G06900.1 | Unigene:At.43069 | UniProt:F4HNU6 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004222 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008237 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | MEROPS:M16.005 | InterPro:Metalloenz_LuxS/M16 | RefSeq:NP_172173.2 |
| ProteinID:OAP16054.1 | PFAM:PF00675 | PFAM:PF05193 | PFAM:PF16187 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00143 |
| PANTHER:PTHR43690 | PANTHER:PTHR43690:SF1 | InterPro:Pept_M16_N | InterPro:Pept_M16_Zn_BS | InterPro:Peptidase_M16_C | InterPro:Peptidase_M16_M |
| SUPFAM:SSF63411 | UniParc:UPI000150577C | SEG:seg | : | : | : |
Description
Nardilysin-like [Source:UniProtKB/Swiss-Prot;Acc:F4HNU6]
Coordinates
chr1:-:2114765..2120745
Molecular Weight (calculated)
117178.0 Da
IEP (calculated)
4.511
GRAVY (calculated)
-0.457
Length
1024 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSMKSVSAL DNVVVKSPND RRLYRVIELE NGLCALLIHD PDIYPEGSVP DQIDEDDEDG EEEDSDGSSE DDDDDEDDEE DGEGDEEDED EDEDEVKGKG
0101: DHQTKKAAAA MCVSMGSFLD PPEAQGLAHF LEHMLFMGST EFPDENEYDS YLSKHGGSSN AYTEMEHTCY HFEVKREFLQ GALKRFSQFF VAPLMKTEAM
0201: EREVLAVDSE FNQALQNDAC RLQQLQCYTS AKGHPFNRFA WGNKKSLSGA MENGVDLREC IVKLYKEYYH GGLMKLVVIG GESLDMLESW VVELFGDVKN
0301: GSKIRPTLEA EGPIWKGGKL YRLEAVKDVH ILDLTWTLPP LRSAYVKKPE DYLAHLLGHE GRGSLHSFLK AKGWATSLSA GVGDDGINRS SLAYVFGMSI
0401: HLTDSGLEKI YDIIGYIYQY LKLLRDVSPQ EWIFKELQDI GNMDFRFAEE QPADDYAAEL SENMLAYPVE HVIYGDYVYQ TWDPKLIEDL MGFFTPQNMR
0501: IDVVSKSIKS EEFQQEPWFG SSYIEEDVPL SLMESWSNPS EVDNSLHLPS KNQFIPCDFS IRAINSDVDP KSQSPPRCII DEPFMKFWYK LDETFKVPRA
0601: NTYFRINLKG AYASVKNCLL TELYINLLKD ELNEIIYQAS IAKLETSLSM YGDKLELKVY GFNEKIPALL SKILAIAKSF MPNLERFKVI KENMERGFRN
0701: TNMKPLNHST YLRLQLLCKR IYDSDEKLSV LNDLSLDDLN SFIPELRSQI FIEALCHGNL SEDEAVNISN IFKDSLTVEP LPSKCRHGEQ ITCFPMGAKL
0801: VRDVNVKNKS ETNSVVELYY QIEPEEAQST RTKAVLDLFH EIIEEPLFNQ LRTKEQLGYV VECGPRLTYR VHGFCFCVQS SKYGPVHLLG RVDNFIKDIE
0901: GLLEQLDDES YEDYRSGMIA RLLEKDPSLL SETNDLWSQI VDKRYMFDFS HKEAEELRSI QKKDVISWYK TYFRESSPKC RRLAVRVWGC DTNMKETQTD
1001: QKAVQVIADA VAFKSTSKFY PSLC
0101: DHQTKKAAAA MCVSMGSFLD PPEAQGLAHF LEHMLFMGST EFPDENEYDS YLSKHGGSSN AYTEMEHTCY HFEVKREFLQ GALKRFSQFF VAPLMKTEAM
0201: EREVLAVDSE FNQALQNDAC RLQQLQCYTS AKGHPFNRFA WGNKKSLSGA MENGVDLREC IVKLYKEYYH GGLMKLVVIG GESLDMLESW VVELFGDVKN
0301: GSKIRPTLEA EGPIWKGGKL YRLEAVKDVH ILDLTWTLPP LRSAYVKKPE DYLAHLLGHE GRGSLHSFLK AKGWATSLSA GVGDDGINRS SLAYVFGMSI
0401: HLTDSGLEKI YDIIGYIYQY LKLLRDVSPQ EWIFKELQDI GNMDFRFAEE QPADDYAAEL SENMLAYPVE HVIYGDYVYQ TWDPKLIEDL MGFFTPQNMR
0501: IDVVSKSIKS EEFQQEPWFG SSYIEEDVPL SLMESWSNPS EVDNSLHLPS KNQFIPCDFS IRAINSDVDP KSQSPPRCII DEPFMKFWYK LDETFKVPRA
0601: NTYFRINLKG AYASVKNCLL TELYINLLKD ELNEIIYQAS IAKLETSLSM YGDKLELKVY GFNEKIPALL SKILAIAKSF MPNLERFKVI KENMERGFRN
0701: TNMKPLNHST YLRLQLLCKR IYDSDEKLSV LNDLSLDDLN SFIPELRSQI FIEALCHGNL SEDEAVNISN IFKDSLTVEP LPSKCRHGEQ ITCFPMGAKL
0801: VRDVNVKNKS ETNSVVELYY QIEPEEAQST RTKAVLDLFH EIIEEPLFNQ LRTKEQLGYV VECGPRLTYR VHGFCFCVQS SKYGPVHLLG RVDNFIKDIE
0901: GLLEQLDDES YEDYRSGMIA RLLEKDPSLL SETNDLWSQI VDKRYMFDFS HKEAEELRSI QKKDVISWYK TYFRESSPKC RRLAVRVWGC DTNMKETQTD
1001: QKAVQVIADA VAFKSTSKFY PSLC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.