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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
plasma membrane: 27800704
plastid: 27992503
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os07t0570500-01 Rice cytosol, plasma membrane 86.13 86.31
Os07t0570100-01 Rice cytosol, plasma membrane 85.73 85.38
TraesCS2D01G206200.1 Wheat cytosol, golgi, unclear 83.5 83.59
HORVU2Hr1G038720.19 Barley extracellular 78.24 83.3
TraesCS2B01G225800.2 Wheat cytosol 83.2 83.28
TraesCS2A01G198400.1 Wheat cytosol, golgi 82.89 82.98
Zm00001d021846_P016 Maize cytosol 83.3 82.63
KXG36518 Sorghum cytosol 83.1 82.6
GSMUA_Achr2P17790_001 Banana cytosol 14.17 75.27
VIT_08s0007g08490.t01 Wine grape cytosol 66.4 67.98
PGSC0003DMT400070070 Potato cytosol, nucleus, peroxisome 39.27 67.83
GSMUA_Achr2P17800_001 Banana cytosol 51.62 67.28
VIT_08s0007g08480.t01 Wine grape cytosol 64.68 66.22
KRH66936 Soybean cytosol 64.07 65.66
KRG95264 Soybean cytosol 63.97 65.56
CDX72028 Canola cytosol 36.44 64.63
Solyc04g015680.2.1 Tomato cytosol, extracellular 63.16 64.26
AT2G41790.1 Thale cress cytosol 61.94 63.09
CDY48762 Canola cytosol 61.64 62.78
Bra004649.1-P Field mustard cytosol 61.54 62.68
CDX79914 Canola cytosol 61.44 62.58
AT3G57470.2 Thale cress cytosol 59.31 60.66
Solyc04g015690.2.1 Tomato cytosol 59.82 60.62
Bra007329.1-P Field mustard cytosol 58.3 59.94
CDY06103 Canola cytosol 59.21 59.88
CDX88949 Canola cytosol 58.4 59.24
Bra014622.1-P Field mustard cytosol 58.0 58.83
Os01t0778800-01 Rice plasma membrane 57.89 58.79
CDY31008 Canola cytosol 57.49 58.32
CDY61872 Canola cytosol 57.49 57.43
Os01t0779100-00 Rice plasma membrane 49.49 56.86
PGSC0003DMT400070079 Potato cytosol 11.94 53.64
PGSC0003DMT400070080 Potato peroxisome 19.33 53.5
CDY33819 Canola cytosol, extracellular 52.33 53.24
KRH15819 Soybean extracellular 9.41 52.25
CDY72352 Canola cytosol, peroxisome 17.61 51.79
AT3G57460.1 Thale cress cytosol, extracellular 13.36 51.76
CDY33824 Canola extracellular 4.76 35.88
Os03t0336300-01 Rice plasma membrane 30.67 29.13
CDY54849 Canola cytosol 3.74 21.64
CDY43076 Canola cytosol 13.66 18.83
Protein Annotations
MapMan:19.4.5.4.2Gene3D:3.30.830.10EntrezGene:4343659ProteinID:BAC79700.1ProteinID:BAF21958.1ProteinID:BAT02225.1
GO:GO:0003674GO:GO:0003824GO:GO:0004222GO:GO:0005488GO:GO:0006508GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0019538GO:GO:0046872MEROPS:M16.A02InterPro:Metalloenz_LuxS/M16
EnsemblPlantsGene:Os07g0570300EnsemblPlants:Os07t0570300-01PFAM:PF00675PFAM:PF05193PFAM:PF16187ScanProsite:PS00143
PANTHER:PTHR43690PANTHER:PTHR43690:SF7InterPro:Pept_M16_NInterPro:Pept_M16_Zn_BSInterPro:Peptidase_M16_CInterPro:Peptidase_M16_M
UniProt:Q7XIH2SUPFAM:SSF63411UniParc:UPI00001B39D4RefSeq:XP_015646468.1SEG:seg:
Description
Peptidase M16, core domain containing protein. (Os07t0570300-01)
Coordinates
chr7:-:22955767..22972671
Molecular Weight (calculated)
113108.0 Da
IEP (calculated)
5.993
GRAVY (calculated)
-0.343
Length
988 amino acids
Sequence
(BLAST)
001: MDSRPPETDA PAEAVPPAAA AAAAAAGDVE ITRPRNDKRG YRRVVLPNDL ECLLVSDPDT DKAAASMNVS VGYFCDPEGL EGLAHFLEHM LFYASEKYPI
101: EDSYSKYITE HGGSTNAFTT CEHTNFFFDV NHDCLNDALD RFAQFFIKPL LSADATLREI KAVDSENQKN LLSDPWRMNQ LQNHISLESH PYHKFGTGNW
201: DTLEVKPKEK GLDTRLELIK FYDSHYSANL MQLVVYGKES LDNLQTLVEN KFCGVRNTGR ERFSFPGHPC SSEHLQVLVK AVPIKQGHTL RILWPITPNI
301: RHYKEGPCKY VSHLIGHEGE GSLFYVLKKL GWAMSLEAGE GDWSYEFSFF SVVIKLTDVG HEHMEDIVGL LFRYITLLQT SGTLKWIFDE LQTICETGFH
401: YRDKGPPIHY VANISSNMQI YPPEDWLIAS SVPSKFSPDA IQGILNELTP DNVRIFWESK KFEGQTNLTE PWYGTSYSVE AVPPSIIQKW VEKAPVEDLH
501: MPKPNIFLPS DLSLKNAEEK ASFPCMLRKT LFSRVWYKPD TMFFTPKAYI KMDFHCPLSR SSPESSVLTD VFTRLLMDYL NDYAYDAQVA GLYYGVRPND
601: TGFQITMVGY NDKMRTLLET VIGKIAEFEV KADRFSVIKE TITKEYENFK FRQPYQQAFY YCSLILEEQT WAWDEELAAV SQIEASDLEK FLPHLLGKTF
701: IESYFAGNME PGAVKGVMQH VEDILFNAPV SLCKALPSSQ HLTKRIVKLE RGLRYYYPAL CLNHQDENSC LLHYIQIHQD DLKKNVILQL LALVAKQPAF
801: HQLRSVEQLG YITLLRQKND SGVRGLQFII QSTVKDPANL DARVEAFLTM FEGTLYQMPD TEFKSNVNAL IDMKLEKYKN IREESAFFWG EISEGTLKFD
901: RKEVEVAALR DLKKEELIEF FNNHVKVNAP QKKILSIQVY GGLHSSEYEK IVHDEPRPNS YQITDIFNFR RSRPLYGSYK GGVGQMKL
Best Arabidopsis Sequence Match ( AT2G41790.1 )
(BLAST)
001: MAVEKSNTTV GGVEILKPRT DNREYRMIVL KNLLQVLLIS DPDTDKCAAS MSVSVGSFSD PQGLEGLAHF LEHMLFYASE KYPEEDSYSK YITEHGGSTN
101: AYTASEETNY HFDVNADCFD EALDRFAQFF IKPLMSADAT MREIKAVDSE NQKNLLSDGW RIRQLQKHLS KEDHPYHKFS TGNMDTLHVR PQAKGVDTRS
201: ELIKFYEEHY SANIMHLVVY GKESLDKIQD LVERMFQEIQ NTNKVVPRFP GQPCTADHLQ ILVKAIPIKQ GHKLGVSWPV TPSIHHYDEA PSQYLGHLIG
301: HEGEGSLFHA LKTLGWATGL SAGEGEWTLD YSFFKVSIDL TDAGHEHMQE ILGLLFNYIQ LLQQTGVCQW IFDELSAICE TKFHYQDKIP PMSYIVDIAS
401: NMQIYPTKDW LVGSSLPTKF NPAIVQKVVD ELSPSNFRIF WESQKFEGQT DKAEPWYNTA YSLEKITSST IQEWVQSAPD VHLHLPAPNV FIPTDLSLKD
501: ADDKETVPVL LRKTPFSRLW YKPDTMFSKP KAYVKMDFNC PLAVSSPDAA VLTDIFTRLL MDYLNEYAYY AQVAGLYYGV SLSDNGFELT LLGYNHKLRI
601: LLETVVGKIA NFEVKPDRFA VIKETVTKEY QNYKFRQPYH QAMYYCSLIL QDQTWPWTEE LDVLSHLEAE DVAKFVPMLL SRTFIECYIA GNVENNEAES
701: MVKHIEDVLF NDPKPICRPL FPSQHLTNRV VKLGEGMKYF YHQDGSNPSD ENSALVHYIQ VHRDDFSMNI KLQLFGLVAK QATFHQLRTV EQLGYITALA
801: QRNDSGIYGV QFIIQSSVKG PGHIDSRVES LLKNFESKLY EMSNEDFKSN VTALIDMKLE KHKNLKEESR FYWREIQSGT LKFNRKEAEV SALKQLQKQE
901: LIDFFDEYIK VGAARKKSLS IRVYGSQHLK EMASDKDEVP SPSVEIEDIV GFRKSQPLHG SFRGCGQPKL
Arabidopsis Description
PXM16Insulin-degrading enzyme-like 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O22941]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.