Factsheet for PGSC0003DMT400070079

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012628_P001	Maize	cytosol	28.18	32.29
PGSC0003DMT400070070	Potato	cytosol, nucleus, peroxisome	57.27	22.03
CDX72028	Canola	cytosol	55.0	21.72
AT3G57460.1	Thale cress	cytosol, extracellular	23.18	20.0
GSMUA_Achr2P17800_001	Banana	cytosol	60.91	17.68
KRG95264	Soybean	cytosol	61.36	14.0
KRH66936	Soybean	cytosol	61.36	14.0
CDX79914	Canola	cytosol	60.0	13.61
Bra004649.1-P	Field mustard	cytosol	59.55	13.51
AT2G41790.1	Thale cress	cytosol	59.55	13.51
CDY48762	Canola	cytosol	59.09	13.4
AT3G57470.2	Thale cress	cytosol	58.64	13.35
HORVU2Hr1G038720.19	Barley	extracellular	54.55	12.93
CDY06103	Canola	cytosol	56.36	12.69
Bra014622.1-P	Field mustard	cytosol	55.45	12.53
CDY31008	Canola	cytosol	55.45	12.53
CDX88949	Canola	cytosol	55.45	12.53
CDY33819	Canola	cytosol, extracellular	55.0	12.46
Zm00001d021846_P016	Maize	cytosol	55.45	12.25
CDY61872	Canola	cytosol	55.0	12.23
Bra007329.1-P	Field mustard	cytosol	53.18	12.17
Os07t0570100-01	Rice	cytosol, plasma membrane	54.55	12.1
KXG36518	Sorghum	cytosol	54.55	12.07
TraesCS2B01G225800.2	Wheat	cytosol	54.09	12.06
TraesCS2D01G206200.1	Wheat	cytosol, golgi, unclear	54.09	12.06
TraesCS2A01G198400.1	Wheat	cytosol, golgi	53.64	11.96
Os07t0570300-01	Rice	plastid	53.64	11.94
Os07t0570500-01	Rice	cytosol, plasma membrane	53.18	11.87
EES01562	Sorghum	cytosol	52.27	11.76
Zm00001d043274_P008	Maize	plastid	51.82	11.6
TraesCS3D01G312900.2	Wheat	cytosol	50.91	11.59
TraesCS3A01G318300.2	Wheat	cytosol	50.91	11.58
TraesCS3B01G347600.1	Wheat	cytosol	50.91	11.58
Os01t0778800-01	Rice	plasma membrane	50.91	11.51
HORVU3Hr1G076480.7	Barley	cytosol	49.55	11.28
Os01t0779100-00	Rice	plasma membrane	41.82	10.7
CDY33824	Canola	extracellular	1.82	3.05
PGSC0003DMT400070080	Potato	peroxisome	3.64	2.24
CDY43076	Canola	cytosol	7.27	2.23
Zm00001d012627_P001	Maize	cytosol	2.27	1.97
CDY72352	Canola	cytosol, peroxisome	2.73	1.79
CDY54849	Canola	cytosol	1.36	1.75
KRH15819	Soybean	extracellular	0.0	0.0
GSMUA_Achr2P17790_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400070079	EnsemblPlantsGene:PGSC0003DMG401027248	Gene3D:3.30.830.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0046872	InterPro:Metalloenz_LuxS/M16	InterPro:Peptidase_M16_M	PANTHER:PTHR43690	PANTHER:PTHR43690:SF7	PFAM:PF16187
PGSC:PGSC0003DMG401027248	SUPFAM:SSF63411	UniParc:UPI000296682D	UniProt:M1CLN3	MapMan:19.4.5.4.2	:

Description

Zinc protease [Source:PGSC_GENE;Acc:PGSC0003DMG401027248]

Coordinates

chr4:+:10098855..10104273

Molecular Weight (calculated)

25528.8 Da

IEP (calculated)

6.764

GRAVY (calculated)

-0.126

Length

220 amino acids

Sequence
(BLAST)

001: MQLSAISETN FHYQDKSSPI GYVVYVASNM QFYPPIDWLV GSSLPSRFSP DIIEAVLSDL TPQNVRIFWV STKFDGNTDS MEPWYETAYS LEKITSSMIE
101: QWMEKAPDGN LHLPVPNMFI PTDLSIKTVS NKMNFPVLLR KSPYSRLWYK PDTLFSMPKG YCIIDFICPQ SRSSPESAVL TCIFVWLLKD YLNEYGKYQR
201: LRYHVSLYVT FVKMCKDLTI

Best Arabidopsis Sequence Match ( AT2G41790.1 )
(BLAST)

001: MAVEKSNTTV GGVEILKPRT DNREYRMIVL KNLLQVLLIS DPDTDKCAAS MSVSVGSFSD PQGLEGLAHF LEHMLFYASE KYPEEDSYSK YITEHGGSTN
101: AYTASEETNY HFDVNADCFD EALDRFAQFF IKPLMSADAT MREIKAVDSE NQKNLLSDGW RIRQLQKHLS KEDHPYHKFS TGNMDTLHVR PQAKGVDTRS
201: ELIKFYEEHY SANIMHLVVY GKESLDKIQD LVERMFQEIQ NTNKVVPRFP GQPCTADHLQ ILVKAIPIKQ GHKLGVSWPV TPSIHHYDEA PSQYLGHLIG
301: HEGEGSLFHA LKTLGWATGL SAGEGEWTLD YSFFKVSIDL TDAGHEHMQE ILGLLFNYIQ LLQQTGVCQW IFDELSAICE TKFHYQDKIP PMSYIVDIAS
401: NMQIYPTKDW LVGSSLPTKF NPAIVQKVVD ELSPSNFRIF WESQKFEGQT DKAEPWYNTA YSLEKITSST IQEWVQSAPD VHLHLPAPNV FIPTDLSLKD
501: ADDKETVPVL LRKTPFSRLW YKPDTMFSKP KAYVKMDFNC PLAVSSPDAA VLTDIFTRLL MDYLNEYAYY AQVAGLYYGV SLSDNGFELT LLGYNHKLRI
601: LLETVVGKIA NFEVKPDRFA VIKETVTKEY QNYKFRQPYH QAMYYCSLIL QDQTWPWTEE LDVLSHLEAE DVAKFVPMLL SRTFIECYIA GNVENNEAES
701: MVKHIEDVLF NDPKPICRPL FPSQHLTNRV VKLGEGMKYF YHQDGSNPSD ENSALVHYIQ VHRDDFSMNI KLQLFGLVAK QATFHQLRTV EQLGYITALA
801: QRNDSGIYGV QFIIQSSVKG PGHIDSRVES LLKNFESKLY EMSNEDFKSN VTALIDMKLE KHKNLKEESR FYWREIQSGT LKFNRKEAEV SALKQLQKQE
901: LIDFFDEYIK VGAARKKSLS IRVYGSQHLK EMASDKDEVP SPSVEIEDIV GFRKSQPLHG SFRGCGQPKL

Arabidopsis Description

PXM16Insulin-degrading enzyme-like 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O22941]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.