Factsheet for VIT_08s0007g08490.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g08480.t01	Wine grape	cytosol	93.06	93.06
GSMUA_Achr2P17790_001	Banana	cytosol	14.82	76.88
KRH66936	Soybean	cytosol	76.17	76.24
KRG95264	Soybean	cytosol	75.65	75.73
PGSC0003DMT400070070	Potato	cytosol, nucleus, peroxisome	44.66	75.35
AT2G41790.1	Thale cress	cytosol	74.61	74.23
Solyc04g015680.2.1	Tomato	cytosol, extracellular	74.51	74.05
CDY48762	Canola	cytosol	73.26	72.89
CDX79914	Canola	cytosol	72.64	72.27
Bra004649.1-P	Field mustard	cytosol	72.64	72.27
CDX72028	Canola	cytosol	41.35	71.63
GSMUA_Achr2P17800_001	Banana	cytosol	56.17	71.5
AT3G57470.2	Thale cress	cytosol	69.64	69.57
Bra007329.1-P	Field mustard	cytosol	68.19	68.47
CDY06103	Canola	cytosol	69.22	68.37
CDX88949	Canola	cytosol	67.98	67.35
Bra014622.1-P	Field mustard	cytosol	67.56	66.94
CDY31008	Canola	cytosol	67.25	66.63
TraesCS2D01G206200.1	Wheat	cytosol, golgi, unclear	68.08	66.57
KXG36518	Sorghum	cytosol	68.5	66.5
TraesCS2A01G198400.1	Wheat	cytosol, golgi	67.98	66.46
Os07t0570300-01	Rice	plastid	67.98	66.4
TraesCS2B01G225800.2	Wheat	cytosol	67.67	66.16
Zm00001d021846_P016	Maize	cytosol	68.08	65.96
HORVU2Hr1G038720.19	Barley	extracellular	63.42	65.95
CDY72352	Canola	cytosol, peroxisome	22.69	65.18
Os07t0570100-01	Rice	cytosol, plasma membrane	66.32	64.52
CDY61872	Canola	cytosol	66.11	64.51
Os07t0570500-01	Rice	cytosol, plasma membrane	65.8	64.4
CDY33819	Canola	cytosol, extracellular	60.83	60.45
TraesCS3D01G312900.2	Wheat	cytosol	60.31	60.25
Os01t0778800-01	Rice	plasma membrane	60.62	60.12
TraesCS3B01G347600.1	Wheat	cytosol	60.0	59.88
TraesCS3A01G318300.2	Wheat	cytosol	59.9	59.77
EES01562	Sorghum	cytosol	60.41	59.61
KRH15819	Soybean	extracellular	10.98	59.55
HORVU3Hr1G076480.7	Barley	cytosol	58.76	58.7
Zm00001d043274_P008	Maize	plastid	59.27	58.19
Os01t0779100-00	Rice	plasma membrane	51.71	58.02
AT3G57460.1	Thale cress	cytosol, extracellular	15.13	57.25
Zm00001d012627_P001	Maize	cytosol	14.09	53.54
Zm00001d012628_P001	Maize	cytosol	10.05	50.52
CDY33824	Canola	extracellular	5.28	38.93
VIT_06s0004g07990.t01	Wine grape	cytosol	31.5	28.63
CDY54849	Canola	cytosol	3.94	22.22
CDY43076	Canola	cytosol	14.4	19.39

Protein Annotations

EntrezGene:100241851	wikigene:100241851	MapMan:19.4.5.4.2	Gene3D:3.30.830.10	ProteinID:CBI29843	ProteinID:CBI29843.3
ncoils:Coil	UniProt:D7THW7	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0004222
GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
GO:GO:0046872	EntrezGene:LOC100241851	wikigene:LOC100241851	MEROPS:M16.017	InterPro:Metalloenz_LuxS/M16	PFAM:PF00675
PFAM:PF05193	PFAM:PF16187	ScanProsite:PS00143	PANTHER:PTHR43690	PANTHER:PTHR43690:SF7	InterPro:Pept_M16_N
InterPro:Pept_M16_Zn_BS	InterPro:Peptidase_M16_C	InterPro:Peptidase_M16_M	SUPFAM:SSF63411	TIGR:TC60990	UniParc:UPI00015CADE8
ArrayExpress:VIT_08s0007g08490	EnsemblPlantsGene:VIT_08s0007g08490	EnsemblPlants:VIT_08s0007g08490.t01	unigene:Vvi.24694	RefSeq:XP_002283970	RefSeq:XP_002283970.1
RefSeq:XP_002283993	RefSeq:XP_002283993.1	:	:	:	:

Description

No Description!

Coordinates

chr8:+:21880859..21902347

Molecular Weight (calculated)

111059.0 Da

IEP (calculated)

6.302

GRAVY (calculated)

-0.341

Length

965 amino acids

Sequence
(BLAST)

001: MGEAAAEIVK PRTDTREYRR IVLRNSLEVL LISDPDTDKA AASMSVSVGS FCDPEGFPGL AHFLEHMLFY ASEKYPLEDS YSKYIIEHGG STNAFTSSEH
101: TNYYFDVNSD CFEEALDRFA QFFVKPLMSA DATTREIKAV DSENQKNLLS DAWRMCQLQK HISAEGHPYH KFSTGNWDTL EVKPKEKGLD TRHELIKFYE
201: EHYSANLMHL VVYTKESLDK IQSLVEHKFQ EIQNKDRSNF QIPGQPCTSE HLQILVKTVP IKQGHKLRVI WPITPSIHNY KEGPCRYLGH LIGHEGEGSL
301: FYILKTLGWA TSLSAGEGDW TCEFSFFKVV IDLTEAGHEH MQDIVGLLFK YISLLQQTGV CKWIFDELSA ICETVFHYQD KIPPIDYVVN VSSNMELYPP
401: KDWLVGSSLP SKFSPDVIQK VLDELAPNNV RIFWESKNFE GHTDMVEPWY GTAYSIEKIT SSMIQQWMLA APNEHLHLPS PNVFIPTDLS LKDVQEKAKF
501: PVLLRKSSYS TLWYKPDTMF STPKAYVKID FNCPFASSSP EADVLTDIFT RLLMDYLNEY AYYAQVAGLY YGINHTDSGF QVAVTGYNHK LRILLETVVE
601: KIANFKVKPD RFLVIKEMVT KEYQNFKFQQ PYQQAMYYCS LILQDNTWPW MDGLEVIPHL EADDLAKFVP MLLSRAFLDC YIAGNIEPKE AESMIHHIED
701: IFYSGPHPIS QPLFPSQYLT NRVIKLDRGM SYFYPAEGLN PSDENSALVH YIQVHRDDFL PNVKLQLFAL IAKQRAFHQL RSVEQLGYIT VLMQRNDSGI
801: RGVQFIIQST VKGPGHIDSR VVEFLKMFES KLYAMSEDEF KSNVNALIDM KLEKHKNLRE ESGFYWREIY DGTLKFDRRE AEVAALKKLT QKELIDFFNE
901: HIKVGAPQKK TLSVRVYGGL HTSEYADEKK EANQPKQVKI DDIFKFRKSQ PLYGSFKGGL GQVKL

Best Arabidopsis Sequence Match ( AT2G41790.1 )
(BLAST)

001: MAVEKSNTTV GGVEILKPRT DNREYRMIVL KNLLQVLLIS DPDTDKCAAS MSVSVGSFSD PQGLEGLAHF LEHMLFYASE KYPEEDSYSK YITEHGGSTN
101: AYTASEETNY HFDVNADCFD EALDRFAQFF IKPLMSADAT MREIKAVDSE NQKNLLSDGW RIRQLQKHLS KEDHPYHKFS TGNMDTLHVR PQAKGVDTRS
201: ELIKFYEEHY SANIMHLVVY GKESLDKIQD LVERMFQEIQ NTNKVVPRFP GQPCTADHLQ ILVKAIPIKQ GHKLGVSWPV TPSIHHYDEA PSQYLGHLIG
301: HEGEGSLFHA LKTLGWATGL SAGEGEWTLD YSFFKVSIDL TDAGHEHMQE ILGLLFNYIQ LLQQTGVCQW IFDELSAICE TKFHYQDKIP PMSYIVDIAS
401: NMQIYPTKDW LVGSSLPTKF NPAIVQKVVD ELSPSNFRIF WESQKFEGQT DKAEPWYNTA YSLEKITSST IQEWVQSAPD VHLHLPAPNV FIPTDLSLKD
501: ADDKETVPVL LRKTPFSRLW YKPDTMFSKP KAYVKMDFNC PLAVSSPDAA VLTDIFTRLL MDYLNEYAYY AQVAGLYYGV SLSDNGFELT LLGYNHKLRI
601: LLETVVGKIA NFEVKPDRFA VIKETVTKEY QNYKFRQPYH QAMYYCSLIL QDQTWPWTEE LDVLSHLEAE DVAKFVPMLL SRTFIECYIA GNVENNEAES
701: MVKHIEDVLF NDPKPICRPL FPSQHLTNRV VKLGEGMKYF YHQDGSNPSD ENSALVHYIQ VHRDDFSMNI KLQLFGLVAK QATFHQLRTV EQLGYITALA
801: QRNDSGIYGV QFIIQSSVKG PGHIDSRVES LLKNFESKLY EMSNEDFKSN VTALIDMKLE KHKNLKEESR FYWREIQSGT LKFNRKEAEV SALKQLQKQE
901: LIDFFDEYIK VGAARKKSLS IRVYGSQHLK EMASDKDEVP SPSVEIEDIV GFRKSQPLHG SFRGCGQPKL

Arabidopsis Description

PXM16Insulin-degrading enzyme-like 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O22941]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.