Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33909 | Canola | plasma membrane | 73.79 | 26.51 |
| CDY54849 | Canola | cytosol | 11.97 | 21.64 |
| CDY33897 | Canola | cytosol | 44.66 | 13.68 |
| CDX86509 | Canola | cytosol | 29.77 | 13.33 |
| CDX72028 | Canola | cytosol | 22.01 | 12.21 |
| CDY10234 | Canola | cytosol | 31.72 | 10.06 |
| CDY54887 | Canola | cytosol | 31.07 | 9.44 |
| CDY09948 | Canola | cytosol | 28.8 | 9.4 |
| CDY43076 | Canola | cytosol | 21.04 | 9.07 |
| CDY15592 | Canola | cytosol | 19.09 | 8.4 |
| CDX88949 | Canola | cytosol | 25.89 | 8.21 |
| CDY31008 | Canola | cytosol | 25.89 | 8.21 |
| CDY06103 | Canola | cytosol | 24.92 | 7.88 |
| CDY61872 | Canola | cytosol | 24.27 | 7.58 |
| CDY48762 | Canola | cytosol | 23.62 | 7.53 |
| CDX79914 | Canola | cytosol | 23.3 | 7.42 |
| CDY33819 | Canola | cytosol, extracellular | 19.42 | 6.18 |
| CDY06238 | Canola | nucleus | 3.56 | 3.57 |
| CDY72352 | Canola | cytosol, peroxisome | 1.29 | 1.19 |
| CDY33824 | Canola | extracellular | 0.32 | 0.76 |
| CDY05626 | Canola | cytosol | 0.97 | 0.62 |
Protein Annotations
| EnsemblPlants:CDY05627 | EnsemblPlantsGene:GSBRNA2T00120598001 | Gene3D:3.30.830.10 | GO:A0A078EXC4 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0046872 | InterPro:Metalloenz_LuxS/M16 | InterPro:Pept_M16_N | InterPro:Peptidase_M16_C | PANTHER:PTHR43690 |
| PANTHER:PTHR43690:SF1 | PFAM:PF00675 | PFAM:PF05193 | ProteinID:CDY05627 | ProteinID:CDY05627.1 | SUPFAM:SSF63411 |
| UniParc:UPI0004EE198E | MapMan:19.4.5.4.2 | : | : | : | : |
Description
BnaC02g39100D
Coordinates
chrLK031963:-:279990..282574
Molecular Weight (calculated)
35660.8 Da
IEP (calculated)
8.597
GRAVY (calculated)
-0.246
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIAHLIEHM LLRGSTENPG ENNDASCFCF INIFQFRSFV KMNGGRVFAV TDMEHSGFSF EIDTPYFQAG LKRFAKSFIS PLMDVEDLKS EINTINQEWL
101: GWKFRDVARL ERLFAHTTHV DHPFHRFTTG NKRSLSNHEP KSVRDAAVKL FVKHFVASCM KLVVIGADPV DKLERCVKKY FSELTRGQQI NLAFPEYDTH
201: RWKHSLWKHG VAYFLESLEG SQTMKISWIL PPVSRTHVNK RPEMFILRLL CDESQGSLSS FFKSKLWITS LRVWSGHESK FSEVESSSYC STLAGQLFVI
301: SMDITDRGW
101: GWKFRDVARL ERLFAHTTHV DHPFHRFTTG NKRSLSNHEP KSVRDAAVKL FVKHFVASCM KLVVIGADPV DKLERCVKKY FSELTRGQQI NLAFPEYDTH
201: RWKHSLWKHG VAYFLESLEG SQTMKISWIL PPVSRTHVNK RPEMFILRLL CDESQGSLSS FFKSKLWITS LRVWSGHESK FSEVESSSYC STLAGQLFVI
301: SMDITDRGW
0001: MSSMKSVSAL DNVVVKSPND RRLYRVIELE NGLCALLIHD PDIYPEGSVP DQIDEDDEDG EEEDSDGSSE DDDDDEDDEE DGEGDEEDED EDEDEVKGKG
0101: DHQTKKAAAA MCVSMGSFLD PPEAQGLAHF LEHMLFMGST EFPDENEYDS YLSKHGGSSN AYTEMEHTCY HFEVKREFLQ GALKRFSQFF VAPLMKTEAM
0201: EREVLAVDSE FNQALQNDAC RLQQLQCYTS AKGHPFNRFA WGNKKSLSGA MENGVDLREC IVKLYKEYYH GGLMKLVVIG GESLDMLESW VVELFGDVKN
0301: GSKIRPTLEA EGPIWKGGKL YRLEAVKDVH ILDLTWTLPP LRSAYVKKPE DYLAHLLGHE GRGSLHSFLK AKGWATSLSA GVGDDGINRS SLAYVFGMSI
0401: HLTDSGLEKI YDIIGYIYQY LKLLRDVSPQ EWIFKELQDI GNMDFRFAEE QPADDYAAEL SENMLAYPVE HVIYGDYVYQ TWDPKLIEDL MGFFTPQNMR
0501: IDVVSKSIKS EEFQQEPWFG SSYIEEDVPL SLMESWSNPS EVDNSLHLPS KNQFIPCDFS IRAINSDVDP KSQSPPRCII DEPFMKFWYK LDETFKVPRA
0601: NTYFRINLKG AYASVKNCLL TELYINLLKD ELNEIIYQAS IAKLETSLSM YGDKLELKVY GFNEKIPALL SKILAIAKSF MPNLERFKVI KENMERGFRN
0701: TNMKPLNHST YLRLQLLCKR IYDSDEKLSV LNDLSLDDLN SFIPELRSQI FIEALCHGNL SEDEAVNISN IFKDSLTVEP LPSKCRHGEQ ITCFPMGAKL
0801: VRDVNVKNKS ETNSVVELYY QIEPEEAQST RTKAVLDLFH EIIEEPLFNQ LRTKEQLGYV VECGPRLTYR VHGFCFCVQS SKYGPVHLLG RVDNFIKDIE
0901: GLLEQLDDES YEDYRSGMIA RLLEKDPSLL SETNDLWSQI VDKRYMFDFS HKEAEELRSI QKKDVISWYK TYFRESSPKC RRLAVRVWGC DTNMKETQTD
1001: QKAVQVIADA VAFKSTSKFY PSLC
0101: DHQTKKAAAA MCVSMGSFLD PPEAQGLAHF LEHMLFMGST EFPDENEYDS YLSKHGGSSN AYTEMEHTCY HFEVKREFLQ GALKRFSQFF VAPLMKTEAM
0201: EREVLAVDSE FNQALQNDAC RLQQLQCYTS AKGHPFNRFA WGNKKSLSGA MENGVDLREC IVKLYKEYYH GGLMKLVVIG GESLDMLESW VVELFGDVKN
0301: GSKIRPTLEA EGPIWKGGKL YRLEAVKDVH ILDLTWTLPP LRSAYVKKPE DYLAHLLGHE GRGSLHSFLK AKGWATSLSA GVGDDGINRS SLAYVFGMSI
0401: HLTDSGLEKI YDIIGYIYQY LKLLRDVSPQ EWIFKELQDI GNMDFRFAEE QPADDYAAEL SENMLAYPVE HVIYGDYVYQ TWDPKLIEDL MGFFTPQNMR
0501: IDVVSKSIKS EEFQQEPWFG SSYIEEDVPL SLMESWSNPS EVDNSLHLPS KNQFIPCDFS IRAINSDVDP KSQSPPRCII DEPFMKFWYK LDETFKVPRA
0601: NTYFRINLKG AYASVKNCLL TELYINLLKD ELNEIIYQAS IAKLETSLSM YGDKLELKVY GFNEKIPALL SKILAIAKSF MPNLERFKVI KENMERGFRN
0701: TNMKPLNHST YLRLQLLCKR IYDSDEKLSV LNDLSLDDLN SFIPELRSQI FIEALCHGNL SEDEAVNISN IFKDSLTVEP LPSKCRHGEQ ITCFPMGAKL
0801: VRDVNVKNKS ETNSVVELYY QIEPEEAQST RTKAVLDLFH EIIEEPLFNQ LRTKEQLGYV VECGPRLTYR VHGFCFCVQS SKYGPVHLLG RVDNFIKDIE
0901: GLLEQLDDES YEDYRSGMIA RLLEKDPSLL SETNDLWSQI VDKRYMFDFS HKEAEELRSI QKKDVISWYK TYFRESSPKC RRLAVRVWGC DTNMKETQTD
1001: QKAVQVIADA VAFKSTSKFY PSLC
Arabidopsis Description
Nardilysin-like [Source:UniProtKB/Swiss-Prot;Acc:F4HNU6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.