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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os09t0249000-01 Rice cytosol, plasma membrane, plastid 81.6 82.83
HORVU5Hr1G051310.1 Barley cytosol, mitochondrion, peroxisome 76.56 78.9
TraesCS5D01G172400.1 Wheat mitochondrion 76.26 78.59
TraesCS5A01G168200.1 Wheat mitochondrion 75.96 78.29
TraesCS5B01G165000.1 Wheat mitochondrion 75.67 77.98
Zm00001d019221_P001 Maize cytosol 85.46 75.39
Solyc05g024410.2.1 Tomato cytosol, extracellular, plastid 63.2 65.34
VIT_12s0057g01080.t01 Wine grape cytosol 62.61 64.53
KRH43755 Soybean cytosol 62.61 64.33
AT3G07720.1 Thale cress cytosol 62.02 63.53
CDY28023 Canola cytosol 61.42 63.3
CDY35957 Canola cytosol 60.83 62.69
Bra029671.1-P Field mustard cytosol 21.96 61.16
PGSC0003DMT400046550 Potato cytosol 20.47 61.06
Bra020713.1-P Field mustard cytosol 18.99 53.78
CDY48738 Canola cytosol 50.74 53.11
CDY05697 Canola cytosol 50.74 53.11
CDX85317 Canola cytosol 49.85 52.17
Bra037506.1-P Field mustard cytosol 49.55 51.86
AT5G48180.1 Thale cress cytosol 48.37 50.0
CDX86322 Canola cytosol 49.55 48.55
CDY30169 Canola cytosol 45.1 47.06
CDY19142 Canola cytosol, peroxisome, plastid 47.77 45.87
CDY52048 Canola plastid 47.48 45.58
AT1G54040.2 Thale cress cytosol 45.4 44.87
CDY36630 Canola cytosol 45.1 44.31
CDX94790 Canola cytosol 44.51 43.73
CDY51408 Canola cytosol 44.51 43.73
CDY49014 Canola cytosol 44.21 43.44
Bra037958.1-P Field mustard cytosol 33.83 43.35
Bra039702.1-P Field mustard cytosol 33.83 43.35
CDX96969 Canola peroxisome 43.92 43.15
CDY08215 Canola cytosol 43.62 42.24
CDY30681 Canola cytosol 42.14 40.8
CDY64894 Canola cytosol, mitochondrion 29.97 39.15
CDY56199 Canola cytosol 45.7 37.29
AT3G16400.1 Thale cress cytosol 49.26 35.32
CDX92073 Canola cytosol 48.37 34.53
AT3G16390.2 Thale cress cytosol 47.77 34.48
CDY56200 Canola endoplasmic reticulum, extracellular, plasma membrane 47.18 34.34
CDY03958 Canola cytosol 47.18 34.12
CDY20194 Canola cytosol 47.18 34.05
CDY65743 Canola cytosol, peroxisome, plastid 42.73 34.04
CDY03963 Canola cytosol 46.88 33.83
AT2G33070.3 Thale cress cytosol 47.48 33.83
CDY28366 Canola cytosol 46.59 33.62
Bra040923.1-P Field mustard cytosol 47.48 31.43
CDY24063 Canola cytosol, mitochondrion 25.52 30.28
Bra022157.1-P Field mustard cytosol 9.5 25.4
AT3G16410.1 Thale cress cytosol 46.59 25.36
Bra018943.1-P Field mustard cytosol 14.54 24.38
Bra021175.1-P Field mustard cytosol 15.43 20.08
CDY60589 Canola cytosol 46.29 19.7
Bra018944.1-P Field mustard cytosol 45.99 19.57
Bra022159.1-P Field mustard cytosol 11.57 14.77
KXG37190 Sorghum cytosol 20.47 13.74
EES16101 Sorghum cytosol, nucleus, plastid 21.07 13.17
OQU85983 Sorghum cytosol 20.18 13.0
EES00630 Sorghum cytosol 23.15 12.72
KXG26585 Sorghum nucleus 23.15 11.85
EER90565 Sorghum plastid 20.18 10.32
KXG23613 Sorghum mitochondrion 19.88 9.68
OQU83951 Sorghum mitochondrion 19.29 9.46
KXG36320 Sorghum cytosol, nucleus, peroxisome 18.69 5.83
Protein Annotations
EnsemblPlants:KXG34722EnsemblPlantsGene:SORBI_3002G082000Gene3D:2.120.10.80GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR015915InterPro:Kelch-typ_b-propellerInterPro:Kelch_1PANTHER:PTHR23244PANTHER:PTHR23244:SF351PFAM:PF01344
PFAM:PF13415PFAM:PF13418ProteinID:KXG34722ProteinID:KXG34722.1SEG:segSUPFAM:SSF117281
UniParc:UPI00081ACE1EUniProt:A0A1B6Q9X2MapMan:35.1:::
Description
hypothetical protein
Coordinates
chr2:+:8706275..8710293
Molecular Weight (calculated)
35689.2 Da
IEP (calculated)
4.550
GRAVY (calculated)
-0.324
Length
337 amino acids
Sequence
(BLAST)
001: MAGTWVKMEQ KGGGPGARSS HSITLVGHTA YSFGGEFTPR VPVDNTMYAF DLGTQTWSAL DDATGDVPPP RVGVTMAAVG GTVYTFGGRD LEHKELNELY
101: AFDTATRAWT LLSSSGGGPP HRSYHSMVAD AEGGRVYVFG GCGDAGRLND LWAYDVASGR WEELPSPGEA CRPRGGPGLA VAGGKVWVVY GFSGEEMDDV
201: HCYDPATRAW AVVETTGDRP SPRSVFCGAG IGRHVVVFGG EVDPSDLGHL GAGKFSAEAF ALDTETRAWT RLVDDDDKAE AEAEQQQHPG PRGWCAFAAG
301: EKDGRQGLLV YGGNSPTNDR LDDIYFFAPV LEAAAAS
Best Arabidopsis Sequence Match ( AT3G07720.1 )
(BLAST)
001: MAATPMEGKW VQLKQKGTGP GARSSHAIAL VGNKMYAFGG EFQPRVPVDN QLYVFDLETQ TWSIQEASGD APPPRVGVAM AAVGPIIYFF GGRDSTHQEL
101: NELYCFNTLT NQWKLLSSGE TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG LEVVQGKIWV VYGFAGEEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK
301: QGLLVYGGNS PSNDRLDDIF FFTPNTLLK
Arabidopsis Description
AT3g07720/F17A17_6 [Source:UniProtKB/TrEMBL;Acc:Q9S7W4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.