Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56199 | Canola | cytosol | 93.5 | 73.12 |
| CDY43093 | Canola | cytosol | 17.96 | 71.6 |
| CDY20194 | Canola | cytosol | 90.09 | 62.31 |
| CDY28366 | Canola | cytosol | 89.16 | 61.67 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 64.71 | 59.54 |
| CDY52048 | Canola | plastid | 64.09 | 58.97 |
| CDY03963 | Canola | cytosol | 84.83 | 58.67 |
| CDX92073 | Canola | cytosol | 84.52 | 57.84 |
| AT3G16400.1 | Thale cress | cytosol | 82.66 | 56.81 |
| AT3G16390.2 | Thale cress | cytosol | 80.19 | 55.46 |
| CDY03958 | Canola | cytosol | 78.02 | 54.08 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 76.78 | 53.56 |
| CDY08215 | Canola | cytosol | 56.97 | 52.87 |
| CDY51408 | Canola | cytosol | 55.73 | 52.48 |
| CDY36630 | Canola | cytosol | 55.42 | 52.19 |
| CDX96969 | Canola | peroxisome | 54.49 | 51.31 |
| CDX85317 | Canola | cytosol | 50.46 | 50.62 |
| CDY30681 | Canola | cytosol | 54.49 | 50.57 |
| CDY48738 | Canola | cytosol | 50.15 | 50.31 |
| CDX94790 | Canola | cytosol | 52.94 | 49.85 |
| CDY05697 | Canola | cytosol | 49.54 | 49.69 |
| CDY49014 | Canola | cytosol | 52.32 | 49.27 |
| CDY64894 | Canola | cytosol, mitochondrion | 39.32 | 49.22 |
| CDY35957 | Canola | cytosol | 49.23 | 48.62 |
| CDY28023 | Canola | cytosol | 48.61 | 48.01 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 48.3 | 47.85 |
| CDX86322 | Canola | cytosol | 50.77 | 47.67 |
| KRH43755 | Soybean | cytosol | 47.06 | 46.34 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 60.68 | 46.34 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 47.37 | 46.08 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 46.44 | 45.87 |
| KXG34722 | Sorghum | cytosol | 47.06 | 45.1 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 44.58 | 44.04 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 44.58 | 44.04 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 44.27 | 43.73 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 43.65 | 43.12 |
| PGSC0003DMT400046550 | Potato | cytosol | 14.86 | 42.48 |
| AT3G16410.1 | Thale cress | cytosol | 79.26 | 41.36 |
| Zm00001d019221_P001 | Maize | cytosol | 47.06 | 39.79 |
| Bra021175.1-P | Field mustard | cytosol | 31.27 | 39.0 |
| CDY24063 | Canola | cytosol, mitochondrion | 31.58 | 35.92 |
| CDY60589 | Canola | cytosol | 63.47 | 25.88 |
| CDY67946 | Canola | cytosol | 16.72 | 15.38 |
| CDX75043 | Canola | cytosol | 21.05 | 14.91 |
| CDX84132 | Canola | cytosol | 21.36 | 13.94 |
| CDX75048 | Canola | cytosol, plastid | 21.05 | 13.65 |
| CDY42440 | Canola | mitochondrion | 20.12 | 13.43 |
| CDX96712 | Canola | mitochondrion | 21.67 | 13.36 |
| CDY49133 | Canola | mitochondrion, nucleus | 20.12 | 13.27 |
| CDY26745 | Canola | nucleus | 21.05 | 13.15 |
| CDY19228 | Canola | nucleus | 21.05 | 13.15 |
| CDY11290 | Canola | cytosol | 20.12 | 12.92 |
| CDY58438 | Canola | cytosol | 19.81 | 12.72 |
| CDX83831 | Canola | nucleus | 20.74 | 12.55 |
| CDY27769 | Canola | cytosol | 22.91 | 11.11 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 22.91 | 11.11 |
| CDX73059 | Canola | cytosol, mitochondrion | 19.81 | 11.0 |
| CDY18797 | Canola | cytosol | 22.6 | 10.96 |
| CDY05568 | Canola | plastid | 22.6 | 10.94 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 22.6 | 10.9 |
| CDY18777 | Canola | cytosol | 22.29 | 10.83 |
| CDY40708 | Canola | cytosol | 21.98 | 10.66 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 21.98 | 10.66 |
| CDX96521 | Canola | mitochondrion | 19.81 | 10.39 |
| CDY13903 | Canola | mitochondrion | 21.36 | 10.24 |
| CDY34042 | Canola | nucleus | 20.74 | 10.11 |
| CDX92598 | Canola | mitochondrion | 21.36 | 9.86 |
| CDX75045 | Canola | cytosol | 21.05 | 8.1 |
| CDX83165 | Canola | nucleus | 21.05 | 6.85 |
| CDY43091 | Canola | cytosol | 1.86 | 5.31 |
| CDY21313 | Canola | cytosol | 16.1 | 5.24 |
| CDX90875 | Canola | cytosol | 16.1 | 5.15 |
| CDY72137 | Canola | cytosol | 1.86 | 3.9 |
| CDY65828 | Canola | cytosol | 3.72 | 3.69 |
Protein Annotations
| EnsemblPlants:CDY30169 | EnsemblPlantsGene:GSBRNA2T00044751001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF351 | PFAM:PF01344 |
| PFAM:PF13854 | ProteinID:CDY30169 | ProteinID:CDY30169.1 | SUPFAM:SSF117281 | UniParc:UPI0004EF0606 | UniProt:A0A078GYF4 |
| MapMan:9.5.2.2 | : | : | : | : | : |
Description
BnaC05g36930DBnaC05g36930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYF4]
Coordinates
chrLK032249:+:467252..470140
Molecular Weight (calculated)
35536.9 Da
IEP (calculated)
4.968
GRAVY (calculated)
-0.280
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQVDKSVEQ KGEGPGLRCS HAIAQVGNKI YSFGGELSPN QPIDKDLYVF DLETRTWSIS PVTGDVPHLS CLGVRMVSVG STIYVFGESR DASRKYYGFY
101: SFDTTKNVWK LLTLVEEGPT PRSFHSMAAD DKNIYVFGGV SATERLKNLD AYNIVDQMWV QCATPGESFS IRGGAGLEVV QGKVWMVYGF NGCEVDDVHY
201: YDPVEDKWTQ VETFGEKPSA RSVFASAVVG KHIVLFRGEI AMDPLAHVGP GQLAGGTFAM NTETLKWERL DKLGEEEETP NIRGWSASTS GTIDGKKGLV
301: MHGGKAQTNG RFDDLFFYGI DSA
101: SFDTTKNVWK LLTLVEEGPT PRSFHSMAAD DKNIYVFGGV SATERLKNLD AYNIVDQMWV QCATPGESFS IRGGAGLEVV QGKVWMVYGF NGCEVDDVHY
201: YDPVEDKWTQ VETFGEKPSA RSVFASAVVG KHIVLFRGEI AMDPLAHVGP GQLAGGTFAM NTETLKWERL DKLGEEEETP NIRGWSASTS GTIDGKKGLV
301: MHGGKAQTNG RFDDLFFYGI DSA
001: MVQKVEARGG EIGDVWDDGA YDGVRKVYVG QGEDGIAFVK FEYVNGSQEV VGDERGKKTL LGAEEFEVDP DDYIVYVEGY HEKVFGVTTK EIISTLTFKT
101: YKGKTSPPFG IVSGTKFVLQ GGKIVGFHGR STDVLHSLGA YISSPATPKL RGKWIKVEQK GEGPGPRCSH DIAQVGNKIF SFGGELTPNQ PIDKHLYVFD
201: LETRTWSISP ATGDVPNLSC LGVRMVSIGS SLYVFGGRDA SRKYNGFYSF DTTKNEWKLL TPVEQGPTPR SFHSMTADEN NVYVFGGVSA TVRLKTLDAY
301: NIVDHKWVQC STPGGSCSVR GGAGLEVVQG KVWVVYGFNG CEVDDVHCYD PAQDKWTQVE TFGEKPCARS VFASAVVGKH ILVFGGEIAM DPKAHEGPGQ
401: LSGGTFALDT ETLKWEKLDK LGEEEETPSI RGWSASTTGT IDGKKGLVMF GGKAQTNDRF GDLFFYGVDS A
101: YKGKTSPPFG IVSGTKFVLQ GGKIVGFHGR STDVLHSLGA YISSPATPKL RGKWIKVEQK GEGPGPRCSH DIAQVGNKIF SFGGELTPNQ PIDKHLYVFD
201: LETRTWSISP ATGDVPNLSC LGVRMVSIGS SLYVFGGRDA SRKYNGFYSF DTTKNEWKLL TPVEQGPTPR SFHSMTADEN NVYVFGGVSA TVRLKTLDAY
301: NIVDHKWVQC STPGGSCSVR GGAGLEVVQG KVWVVYGFNG CEVDDVHCYD PAQDKWTQVE TFGEKPCARS VFASAVVGKH ILVFGGEIAM DPKAHEGPGQ
401: LSGGTFALDT ETLKWEKLDK LGEEEETPSI RGWSASTTGT IDGKKGLVMF GGKAQTNDRF GDLFFYGVDS A
Arabidopsis Description
NSP2nitrile specifier protein 2 [Source:TAIR;Acc:AT2G33070]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.