Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74147 | Canola | cytosol, nucleus, plastid | 94.89 | 94.89 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 91.29 | 91.29 |
| CDY27769 | Canola | cytosol | 91.29 | 91.29 |
| CDY18777 | Canola | cytosol | 90.69 | 90.83 |
| AT3G05420.2 | Thale cress | cytosol | 90.24 | 89.84 |
| CDY18797 | Canola | cytosol | 89.64 | 89.64 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 76.73 | 76.27 |
| CDY05568 | Canola | plastid | 76.13 | 76.01 |
| VIT_14s0060g02410.t01 | Wine grape | plastid | 73.72 | 72.85 |
| Solyc01g099350.2.1 | Tomato | extracellular | 71.62 | 71.3 |
| KRG96823 | Soybean | cytosol, plastid | 68.92 | 70.72 |
| KRH68531 | Soybean | nucleus | 69.22 | 70.06 |
| PGSC0003DMT400063503 | Potato | extracellular | 35.14 | 69.85 |
| KRG92884 | Soybean | nucleus | 68.92 | 69.65 |
| GSMUA_Achr2P02340_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 65.47 | 64.69 |
| Os03t0835600-01 | Rice | plastid | 63.51 | 64.58 |
| EER90565 | Sorghum | plastid | 63.51 | 64.19 |
| TraesCS4A01G356400.2 | Wheat | plastid | 63.06 | 62.78 |
| TraesCS5D01G515900.2 | Wheat | plastid | 63.06 | 62.78 |
| TraesCS5B01G515800.1 | Wheat | cytosol, peroxisome, plastid | 62.91 | 62.63 |
| GSMUA_Achr6P20340_001 | Banana | plastid | 63.51 | 62.02 |
| Zm00001d034758_P003 | Maize | plastid | 62.31 | 60.94 |
| HORVU5Hr1G117970.2 | Barley | plastid | 62.61 | 59.91 |
| Zm00001d046434_P003 | Maize | plastid | 50.6 | 55.34 |
| HORVU5Hr1G025310.1 | Barley | cytosol | 38.14 | 52.81 |
| TraesCS5D01G106400.1 | Wheat | cytosol | 40.99 | 51.9 |
| Zm00001d012892_P002 | Maize | plastid | 60.81 | 51.72 |
| TraesCS5B01G100100.1 | Wheat | cytosol | 40.84 | 51.42 |
| TraesCS5A01G094000.1 | Wheat | cytosol | 40.54 | 51.23 |
| Os12t0540800-01 | Rice | extracellular | 40.24 | 50.85 |
| EES16101 | Sorghum | cytosol, nucleus, plastid | 38.44 | 47.5 |
| Zm00001d041692_P001 | Maize | nucleus | 36.34 | 44.57 |
| CDY11290 | Canola | cytosol | 31.98 | 42.35 |
| CDY58438 | Canola | cytosol | 31.83 | 42.15 |
| CDY48738 | Canola | cytosol | 11.86 | 24.53 |
| CDY05697 | Canola | cytosol | 11.71 | 24.22 |
| CDX85317 | Canola | cytosol | 11.71 | 24.22 |
| CDX86322 | Canola | cytosol | 12.01 | 23.26 |
| CDX96969 | Canola | peroxisome | 11.71 | 22.74 |
| CDY13903 | Canola | mitochondrion | 22.97 | 22.7 |
| CDY28023 | Canola | cytosol | 11.11 | 22.63 |
| CDX94790 | Canola | cytosol | 11.56 | 22.45 |
| CDY35957 | Canola | cytosol | 10.96 | 22.32 |
| CDY36630 | Canola | cytosol | 11.41 | 22.16 |
| CDX92598 | Canola | mitochondrion | 23.27 | 22.14 |
| CDY08215 | Canola | cytosol | 11.56 | 22.13 |
| CDY30169 | Canola | cytosol | 10.66 | 21.98 |
| CDY49014 | Canola | cytosol | 11.26 | 21.87 |
| CDY51408 | Canola | cytosol | 11.26 | 21.87 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 11.41 | 21.65 |
| CDY52048 | Canola | plastid | 11.41 | 21.65 |
| CDY30681 | Canola | cytosol | 11.11 | 21.26 |
| CDY56199 | Canola | cytosol | 12.46 | 20.1 |
| CDY67946 | Canola | cytosol | 10.06 | 19.09 |
| CDY26745 | Canola | nucleus | 14.71 | 18.96 |
| CDX75043 | Canola | cytosol | 12.76 | 18.64 |
| CDY64894 | Canola | cytosol, mitochondrion | 7.21 | 18.6 |
| CDY42440 | Canola | mitochondrion | 13.51 | 18.59 |
| CDY19228 | Canola | nucleus | 14.41 | 18.57 |
| CDY43093 | Canola | cytosol | 2.25 | 18.52 |
| CDX96712 | Canola | mitochondrion | 14.56 | 18.51 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 11.71 | 18.44 |
| CDY28366 | Canola | cytosol | 12.91 | 18.42 |
| CDY20194 | Canola | cytosol | 12.91 | 18.42 |
| CDY49133 | Canola | mitochondrion, nucleus | 13.51 | 18.37 |
| CDX83831 | Canola | nucleus | 14.56 | 18.16 |
| CDX84132 | Canola | cytosol | 13.36 | 17.98 |
| CDX75048 | Canola | cytosol, plastid | 13.21 | 17.67 |
| CDY24063 | Canola | cytosol, mitochondrion | 7.51 | 17.61 |
| CDX92073 | Canola | cytosol | 12.46 | 17.58 |
| CDY03963 | Canola | cytosol | 12.01 | 17.13 |
| CDY03958 | Canola | cytosol | 11.86 | 16.95 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 11.41 | 16.41 |
| CDX73059 | Canola | cytosol, mitochondrion | 13.66 | 15.64 |
| CDX96521 | Canola | mitochondrion | 14.41 | 15.58 |
| CDY34042 | Canola | nucleus | 15.17 | 15.23 |
| CDY21313 | Canola | cytosol | 17.72 | 11.9 |
| CDX90875 | Canola | cytosol | 17.87 | 11.79 |
| CDY60589 | Canola | cytosol | 13.81 | 11.62 |
| CDX75045 | Canola | cytosol | 13.06 | 10.37 |
| CDX83165 | Canola | nucleus | 15.02 | 10.08 |
| CDY43091 | Canola | cytosol | 1.5 | 8.85 |
| CDY72137 | Canola | cytosol | 1.8 | 7.79 |
| CDY65828 | Canola | cytosol | 3.3 | 6.77 |
Protein Annotations
| Gene3D:1.20.80.10 | Gene3D:2.120.10.80 | MapMan:35.1 | GO:A0A078HVB6 | UniProt:A0A078HVB6 | InterPro:Acyl-CoA-binding_protein |
| InterPro:Acyl-CoA-binding_sf | EnsemblPlants:CDY40708 | ProteinID:CDY40708 | ProteinID:CDY40708.1 | ncoils:Coil | InterPro:FERM/acyl-CoA-bd_prot_sf |
| GO:GO:0000062 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00071599001 | InterPro:IPR000582 |
| InterPro:IPR014352 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00887 | PFAM:PF01344 |
| PFAM:PF13415 | PFscan:PS51228 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF336 | SUPFAM:SSF117281 | SUPFAM:SSF47027 |
| UniParc:UPI0004EE1D3F | SEG:seg | : | : | : | : |
Description
BnaC03g34240DBnaC03g34240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVB6]
Coordinates
chrLK032477:+:257847..262535
Molecular Weight (calculated)
73100.4 Da
IEP (calculated)
4.865
GRAVY (calculated)
-0.493
Length
666 amino acids
Sequence
(BLAST)
(BLAST)
001: MAITRATSGP AYPERFYAAA SYVGLDGSDS SAKHVSSKFS NDTALIFYAL YQQATVGPCN TRKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEEE
101: NPDWYSREFT DIPDPVVDVQ INQTKDEPVV ENGNSLSETK TISAENGRLS ETQDKDVVSE DPNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHALDFKNWT WSRVETKVAT ESEETSPTLL SPCAGHTLIP WDNRLLSIGG HTKDPSESMQ VKVFDTHTCT WSMLKTYGKP PVSRGGQSVT
301: IVGKTLVIFG GQDAKRSLLN DLHVLDLETM TWDEIDAIGV SPSPRSDHAA AVHAELYLLI FGGGSHATCF GDLHVLDLQT MEWSRPAQQG EAPAPRSGHA
401: GVTIGENWFI VGGGDNKSGA SESVVLNMST LTWSVVASVE GRVPLASEGL SLVVSSYNGE DVLVAFGGYN GRYNNEINLL KPSHKSTLQP KTLEAPLPVS
501: LSAVNNATTR DIESEVEVSQ ESRVREILMD NANAGSKVEG NSEHIIAILK SEKEELEASL NKEQMQTLQL RQELTEGESR NTDLNKELQS VRGQLATEQS
601: RCFKLEVDVA ELRQKLQTLE TLPKELELLQ RQMAASEQAA TNSKRQSSGG VWGWLAGSPQ EKDDSP
101: NPDWYSREFT DIPDPVVDVQ INQTKDEPVV ENGNSLSETK TISAENGRLS ETQDKDVVSE DPNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHALDFKNWT WSRVETKVAT ESEETSPTLL SPCAGHTLIP WDNRLLSIGG HTKDPSESMQ VKVFDTHTCT WSMLKTYGKP PVSRGGQSVT
301: IVGKTLVIFG GQDAKRSLLN DLHVLDLETM TWDEIDAIGV SPSPRSDHAA AVHAELYLLI FGGGSHATCF GDLHVLDLQT MEWSRPAQQG EAPAPRSGHA
401: GVTIGENWFI VGGGDNKSGA SESVVLNMST LTWSVVASVE GRVPLASEGL SLVVSSYNGE DVLVAFGGYN GRYNNEINLL KPSHKSTLQP KTLEAPLPVS
501: LSAVNNATTR DIESEVEVSQ ESRVREILMD NANAGSKVEG NSEHIIAILK SEKEELEASL NKEQMQTLQL RQELTEGESR NTDLNKELQS VRGQLATEQS
601: RCFKLEVDVA ELRQKLQTLE TLPKELELLQ RQMAASEQAA TNSKRQSSGG VWGWLAGSPQ EKDDSP
001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP
Arabidopsis Description
ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.