Factsheet for TraesCS4A01G356400.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	99.55	99.55
TraesCS5D01G515900.2	Wheat	plastid	99.55	99.55
HORVU5Hr1G117970.2	Barley	plastid	97.76	93.97
Os03t0835600-01	Rice	plastid	85.65	87.48
EER90565	Sorghum	plastid	85.05	86.34
Zm00001d034758_P003	Maize	plastid	82.06	80.62
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	73.09	72.55
Zm00001d046434_P003	Maize	plastid	64.57	70.94
Zm00001d012892_P002	Maize	plastid	80.72	68.97
GSMUA_Achr6P20340_001	Banana	plastid	69.06	67.74
VIT_14s0060g02410.t01	Wine grape	plastid	67.56	67.06
Solyc01g099350.2.1	Tomato	extracellular	65.02	65.02
AT3G05420.2	Thale cress	cytosol	64.57	64.57
CDY05166	Canola	cytosol, nucleus, plastid	63.68	63.96
CDY27769	Canola	cytosol	63.68	63.96
Bra039439.1-P	Field mustard	cytosol	63.68	63.87
CDY18797	Canola	cytosol	63.53	63.81
CDY18777	Canola	cytosol	63.23	63.61
Bra040219.1-P	Field mustard	cytosol	63.23	63.61
CDY40708	Canola	cytosol	62.78	63.06
KRG92884	Soybean	nucleus	62.03	62.97
KRH68531	Soybean	nucleus	61.88	62.92
KRG96823	Soybean	cytosol, plastid	60.99	62.87
CDX74147	Canola	cytosol, nucleus, plastid	61.73	62.01
PGSC0003DMT400063503	Potato	extracellular	30.79	61.49
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	60.69	60.78
Bra001147.1-P	Field mustard	cytosol	62.03	60.76
CDY05568	Canola	plastid	59.64	59.82
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	59.34	59.52
CDY25029	Canola	cytosol, nucleus, plastid	59.19	59.1
TraesCS5A01G094000.1	Wheat	cytosol	45.44	57.69
TraesCS6A01G406400.1	Wheat	cytosol	32.74	38.02
TraesCS4A01G167800.1	Wheat	mitochondrion	25.11	24.56
TraesCS5A01G094400.1	Wheat	mitochondrion	24.81	24.16
TraesCS5A01G168200.1	Wheat	mitochondrion	11.81	24.16
TraesCS4A01G356300.1	Wheat	mitochondrion	14.35	19.09
TraesCS3A01G192200.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	16.59	18.32
TraesCS2A01G321200.1	Wheat	nucleus	15.84	16.04
TraesCS2A01G223200.1	Wheat	cytosol	18.09	11.13

Protein Annotations

Gene3D:1.20.80.10	Gene3D:2.120.10.80	MapMan:35.1	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	ncoils:Coil
InterPro:FERM/acyl-CoA-bd_prot_sf	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000582
InterPro:IPR014352	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF00887	PFAM:PF01344
PFAM:PF13415	PFAM:PF13418	PFscan:PS51228	PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	SUPFAM:SSF117281
SUPFAM:SSF47027	EnsemblPlantsGene:TraesCS4A01G356400	EnsemblPlants:TraesCS4A01G356400.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr4A:+:629911234..629917590

Molecular Weight (calculated)

72680.1 Da

IEP (calculated)

4.789

GRAVY (calculated)

-0.417

Length

669 amino acids

Sequence
(BLAST)

001: MASSGIAYPD RFYAAAAYAG FGAGAPSTAA ISRFQNDVAL LLYGLHQQAT VGPCNVPKPR AWSPVEQSKW TSWHGLGSMP SAEAMRLFVK ILEEEDPGWY
101: SRIPEFINPQ PVVDIEMHKP KEEPDIVPAL TNGTGTSSIP EPKTISENGS SVETQDKVVI LEGLSTVSAH EEWTALSVSG QRPKPRYEHG ATVLQDKMYI
201: FGGNHNGRYL SDLQVLDLKS LTWSKIDAKL QAGTSDSAKT AQVSPCAGHS LISCGNKFFS VAGHTKDPSD SITVKEFDPH TCTWSIVKTY GKPPVSRGGQ
301: SVTLVGTTLV VFGGEDAKRC LLNDLHILDL ETMTWDDVDA IGTPPAPRSD HVAACHADRY LLIFGGGSHA TCFNDLHVLD LQTMEWSRPK QQGPIPSPRA
401: GHAGATVGEN WYIVGGGNNK SGVSETLVLN MSTLAWSVVS TVEGRVPLAS EGMTLLYSNY SGEDYLISFG GYNGRYSNEV YALKLSVKLD LQSSTKDQPT
501: SDSTSRVLEP EVEISQDGKI REIAMDNADS KNRNDEANEQ LLAALKAEKD ELEATLNREG LQTVQLKEEI TEAEARNAEL TKELQAVRGQ LAAEQSRCFK
601: LEVDVAELRQ KLQSLDALER EVELLRRQKA ASEQEQAALD AKQKKQAGSG GVWGWLVGTP PDDDDSESS

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.