Factsheet for TraesCS4A01G167800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G147200.1	Wheat	mitochondrion	98.54	98.54
TraesCSU01G068300.1	Wheat	mitochondrion	96.64	97.06
HORVU4Hr1G032550.32	Barley	mitochondrion	93.42	93.28
OQU83951	Sorghum	mitochondrion	85.67	85.3
Os11t0657000-01	Rice	mitochondrion	19.88	83.95
Zm00001d048718_P010	Maize	mitochondrion	82.16	80.86
TraesCS5A01G094400.1	Wheat	mitochondrion	68.86	68.56
PGSC0003DMT400058372	Potato	mitochondrion	27.92	59.69
GSMUA_Achr3P23920_001	Banana	mitochondrion	57.31	55.13
Solyc01g067480.2.1	Tomato	mitochondrion	51.46	53.58
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	55.41	53.23
VIT_05s0020g01740.t01	Wine grape	mitochondrion	55.26	52.72
PGSC0003DMT400050298	Potato	cytosol, plastid	28.22	51.33
CDY13903	Canola	mitochondrion	50.44	51.19
KRH02216	Soybean	mitochondrion	52.63	50.85
KRH21038	Soybean	mitochondrion	52.63	50.7
KRH11220	Soybean	mitochondrion	52.92	50.42
Bra002170.1-P	Field mustard	mitochondrion	50.58	49.43
CDX92598	Canola	mitochondrion	50.58	49.43
AT5G18590.1	Thale cress	mitochondrion	50.58	48.87
KRH50909	Soybean	nucleus	51.61	48.56
PGSC0003DMT400058369	Potato	mitochondrion	17.69	38.41
TraesCS5A01G094000.1	Wheat	cytosol	21.93	28.46
TraesCS4A01G356400.2	Wheat	plastid	24.56	25.11
TraesCS6A01G406400.1	Wheat	cytosol	19.3	22.92
TraesCS4A01G356300.1	Wheat	mitochondrion	14.77	20.08
TraesCS5A01G168200.1	Wheat	mitochondrion	9.5	19.88
TraesCS3A01G192200.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	14.62	16.5
TraesCS2A01G321200.1	Wheat	nucleus	15.2	15.73
TraesCS2A01G223200.1	Wheat	cytosol	15.35	9.66

Protein Annotations

EnsemblPlants:TraesCS4A01G167800.1	EnsemblPlantsGene:TraesCS4A01G167800	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	ncoils:Coil	PANTHER:PTHR23244	PANTHER:PTHR23244:SF414	PFAM:PF13418
PFAM:PF13854	SEG:seg	SUPFAM:SSF117281	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4A:+:418060850..418078863

Molecular Weight (calculated)

76314.2 Da

IEP (calculated)

8.536

GRAVY (calculated)

-0.624

Length

684 amino acids

Sequence
(BLAST)

001: MPKMFGFSRR RMKLGRLKGH LHDPFHGPRS PAHPTKRSSH LTGEEPVATS VSGRPDDLAW RCSSDTFDLN GRAFENSENW AVLSTDGDKP SPRFDHAAAM
101: VGSKMIVFGG DSGNHLLDDT KILSLDKLTW DSVASKVRVS PGGRCAQFRP CKGHCLVPWD KTVILVGGKT EPSSDRISVW TFNTETEIWS HMEAKGDIPV
201: VRSGHTVTRA GPVLILFGGE DTKGKKLHDL HMFDLKSLTW LPLNYKGAGP SPRSNHVAAL YDDRILLIFG GQSKSKTLND VHALDFETMV WSRMRTHGHH
301: PSPRAGCCGA LCGTKWYIAG GGSKKRRHPE TWVFDVLESK WSVCVVPPSS SITTKKGFSM VPLYYRDKIV LVSFGGNKKE PSDKVEVLVV LQNEHCFSWR
401: SAPDAEPLMY EDSSPSSKEL ADHLNNCDPL YSNSVARHSL ATTVESSSGR KSLPDSLLHN SKVGGSSLRR QFRQEEECSL AQKLQKPIDD DKYKDVDDCS
501: ELPSFANQKQ RSDTYHSPDA DAKTKRVGRS SSDINHQHDT KIANLVRRNM ALEEQLSAAM ASKDEAEKNL SLVIDTKEEL EKRLAERDRE VVALKEKVGG
601: LEQAHEDLNN ASNTVHADNV RLEREVAFLK AVMDETQKEF YSTRGVLAGE RARAFQLQVE VFHLKQRLQS MDGRSPTQRK PQNL

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.