CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50909	Soybean	nucleus	93.22	90.78
KRH11220	Soybean	mitochondrion	78.11	77.02
PGSC0003DMT400058372	Potato	mitochondrion	34.6	76.56
KRH21038	Soybean	mitochondrion	75.99	75.77
Solyc01g067480.2.1	Tomato	mitochondrion	65.96	71.08
VIT_05s0020g01740.t01	Wine grape	mitochondrion	71.61	70.71
CDY13903	Canola	mitochondrion	62.29	65.43
Bra002170.1-P	Field mustard	mitochondrion	63.14	63.86
CDX92598	Canola	mitochondrion	62.85	63.57
AT5G18590.1	Thale cress	mitochondrion	63.56	63.56
PGSC0003DMT400050298	Potato	cytosol, plastid	33.19	62.5
PGSC0003DMT400058369	Potato	mitochondrion	25.42	57.14
GSMUA_Achr3P23920_001	Banana	mitochondrion	56.36	56.12
OQU83951	Sorghum	mitochondrion	52.12	53.71
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	53.81	53.51
TraesCSU01G068300.1	Wheat	mitochondrion	51.13	53.16
TraesCS4D01G147200.1	Wheat	mitochondrion	51.27	53.07
KXG23613	Sorghum	mitochondrion	51.69	52.89
TraesCS4A01G167800.1	Wheat	mitochondrion	50.85	52.63
HORVU4Hr1G032550.32	Barley	mitochondrion	50.14	51.82
Zm00001d048718_P010	Maize	mitochondrion	50.85	51.8
TraesCS5A01G094400.1	Wheat	mitochondrion	49.44	50.95
TraesCS5D01G106700.1	Wheat	mitochondrion	49.15	50.73
Os12t0538800-01	Rice	mitochondrion, nucleus	50.0	50.72
TraesCS5B01G100500.1	Wheat	mitochondrion	48.87	50.44
HORVU5Hr1G025430.25	Barley	mitochondrion	46.19	46.78
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	49.29	45.62
Os11t0657000-01	Rice	mitochondrion	9.75	42.59
KRG92111	Soybean	cytosol	5.65	29.2
KRH34674	Soybean	cytosol	20.48	28.77
KRG92113	Soybean	cytosol	14.55	28.07
KRH68531	Soybean	nucleus	22.18	23.86
KRG96823	Soybean	cytosol, plastid	21.33	23.27
KRG92884	Soybean	nucleus	20.62	22.15
KRH43755	Soybean	cytosol	9.75	21.04
KRG92046	Soybean	cytosol	12.57	17.87
KRH33805	Soybean	nucleus	15.4	17.27
KRG90521	Soybean	peroxisome	15.4	17.27
KRH68432	Soybean	cytosol, nucleus, plastid	15.11	16.88
KRH63715	Soybean	nucleus	14.55	15.61
KRH54239	Soybean	nucleus	14.41	15.45
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	15.11	14.92
KRH54725	Soybean	cytosol	12.85	14.85
KRH63188	Soybean	cytosol	12.85	14.85
KRH03160	Soybean	cytosol	12.85	14.54
KRH56785	Soybean	nucleus	12.85	14.44
KRH02069	Soybean	cytosol	9.89	11.36
KRH51088	Soybean	cytosol	15.4	10.14

Protein Annotations

EMBL:ACUP02010299	EnsemblPlants:KRH02216	EnsemblPlantsGene:GLYMA_17G024000	EntrezGene:100818159	Gene3D:2.120.10.80	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil
PANTHER:PTHR23244	PANTHER:PTHR23244:SF308	PFAM:PF01344	PFAM:PF13418	ProteinID:KRH02216	ProteinID:KRH02216.1
SEG:seg	SUPFAM:SSF117281	UniParc:UPI000233DF53	UniProt:I1MRF7	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr17:-:1750107..1756551

Molecular Weight (calculated)

78123.5 Da

IEP (calculated)

8.410

GRAVY (calculated)

-0.488

Length

708 amino acids

Sequence
(BLAST)

001: MFGFSRRRMK LGRLKVQLSE ANPGTRTPVR PPKRNGTEIG DAAGGSSGHS DEVDCQPSTE ITSCGSSENW MVLSIAGDKP IPRSNHAAAV IGNKMIVVGG
101: ESGTGLLDDV QVLNFDRFSW TTASSKLYLS PSSLPLKIPA CKGHSLVSWG KKALLIGGKT DPGSDRISVW AFDTETECWS LMEAKGDIPV ARSGHSVVRA
201: SSVLILFGGE DAKRRKLNDL HMFDLKSLTW LPLHYTGTAP SPRFNHVAAL YDDKILYIFG GSSKSRTLND LYSLDFETMA WSRVKMRGFH PSPRAGCCGV
301: LCGTKWYITG GGSRKKRHGE TVIFDIVKNE WSVAITSPPS SITTNKGFSM VLVQHKEKDF LVAFGGSKKE PSNQVEVLIM EKNESALGRQ SAPSKCSASV
401: LLEKHSSSTR LAPQLNDCSQ RLVDSVARQN LASAIEHGSG RRSLSESLVV DPNFPPTNTS LRKQFDHDEE YNTDLKMDKN SDENSFPRAV DHRTNENDHG
501: KQMNSSGAKN ITEEQQALLS GIPIQQNLVF ENDMLESDNV SFTENIKSGS LTTSNVYHCY ESKLASLIRK NGILEGQLAA SLASKEAAEK SLASVLKSRQ
601: EMERKLAESH KEMELMREKL TSLELAQEEA NNLSNIVHSD NVRLEHDVAF LKAVLDDTQK ELHSTRGVIA GERARAFQLQ YEVFHLKQRL QSMENRASTT
701: PRKPFHVQ

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.