Factsheet for Zm00001d048718_P010

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83951	Sorghum	mitochondrion	90.36	91.41
TraesCS4D01G147200.1	Wheat	mitochondrion	81.15	82.46
TraesCS4A01G167800.1	Wheat	mitochondrion	80.86	82.16
TraesCSU01G068300.1	Wheat	mitochondrion	79.86	81.5
Os11t0657000-01	Rice	mitochondrion	18.99	81.48
HORVU4Hr1G032550.32	Barley	mitochondrion	78.7	79.85
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	64.75	58.82
PGSC0003DMT400058372	Potato	mitochondrion	27.05	58.75
GSMUA_Achr3P23920_001	Banana	mitochondrion	56.83	55.56
Solyc01g067480.2.1	Tomato	mitochondrion	50.65	53.58
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	54.39	53.09
PGSC0003DMT400050298	Potato	cytosol, plastid	28.2	52.13
VIT_05s0020g01740.t01	Wine grape	mitochondrion	53.67	52.02
CDY13903	Canola	mitochondrion	50.22	51.78
KRH21038	Soybean	mitochondrion	52.37	51.27
KRH02216	Soybean	mitochondrion	51.8	50.85
KRH11220	Soybean	mitochondrion	51.8	50.14
Bra002170.1-P	Field mustard	mitochondrion	49.93	49.57
CDX92598	Canola	mitochondrion	49.78	49.43
AT5G18590.1	Thale cress	mitochondrion	50.22	49.29
KRH50909	Soybean	nucleus	51.37	49.11
PGSC0003DMT400058369	Potato	mitochondrion	17.84	39.37
Zm00001d041692_P001	Maize	nucleus	19.28	24.68
Zm00001d034758_P003	Maize	plastid	23.88	24.38
Zm00001d046434_P003	Maize	plastid	20.14	22.99
Zm00001d051876_P002	Maize	nucleus	18.85	22.05
Zm00001d012892_P002	Maize	plastid	23.02	20.43
Zm00001d034759_P001	Maize	cytosol	14.39	20.0
Zm00001d019221_P001	Maize	cytosol	9.93	18.06
Zm00001d040606_P001	Maize	cytosol	15.54	17.42
Zm00001d009123_P001	Maize	cytosol	14.82	16.48
Zm00001d031492_P001	Maize	cytosol	2.88	13.99
Zm00001d003259_P006	Maize	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	14.24	13.94
Zm00001d037558_P001	Maize	cytosol	2.3	13.22
Zm00001d038406_P001	Maize	cytosol	3.31	10.55
Zm00001d021624_P002	Maize	mitochondrion	13.96	8.95

Protein Annotations

EnsemblPlants:Zm00001d048718_P010	EnsemblPlants:Zm00001d048718_T010	EnsemblPlantsGene:Zm00001d048718	EntrezGene:100279529	Gene3D:2.120.10.80	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	ncoils:Coil	PANTHER:PTHR23244
PANTHER:PTHR23244:SF414	PFAM:PF13418	ProteinID:AQK48670.1	ProteinID:AQK48675.1	SEG:seg	SUPFAM:SSF117281
UniParc:UPI0004DEAF82	UniProt:A0A1D6PPA8	MapMan:35.1	:	:	:

Description

Galactose oxidase/kelch repeat superfamily protein

Coordinates

chr4:-:4153366..4160807

Molecular Weight (calculated)

76868.0 Da

IEP (calculated)

9.093

GRAVY (calculated)

-0.595

Length

695 amino acids

Sequence
(BLAST)

001: MPKMFGFSRR RMKLGRLKGH LHDHFHGPRS PSRTTKRSSS HHNAEDPLAT SVSGRADDLA WRCSSDTFDL NGRDFESSEN WAVLSTEGDK PAPRFDHAAA
101: MVGSKMVVFG GDSGQSLLDD TKILSLDKLT WDSVAPKVRP PLNGRSLKLR PCRGHCLVSW GKNVILVGGK SDQPYDKISV WTFNTESELW SHMEAKGDIP
201: VSRSGHTVIR AGPVLILFGG EDAKGKKLHD LHMFDLKSLT WLPLNYKGAG PSPRSNHVAA LYDDRVLLIF GGQSKSKTLN DIHALDFETM VWSRVKTHGH
301: HPSPRAGCCG ALCGTKWYIA GGGSKKKRHP ETWVFDVLES RWSVCVVPPS SSITTKKGFS MVPLYYRDKI VLVAFGGNKK EPSDKVEVLV VLQNEHCFSW
401: RSAPEVEPLL YDESPPGSRE LADHLSSCAP PYPTSSAARS GLAATAENSC GRKPLPDSLL RTSNLGGSSL RRQFRQEEEC SSLAQKLQKP IDDDRYKDAA
501: DECSEHQPPS ATNPKPRNDA RRSSPEVVVD AKARRLLGRS SSDMNNHQDA RVAALVRRNV ALEEQLSAAL ASKDEAEKNL SLVIDSKDGL EKRLAEKDRE
601: VEALREKATG LELAQEEANS LSNTVHADNV RLEREVAFLK AVMDETQKEL HSTRGVLAGE RARAFQLQVE VFHLKQRLQT MEGRSPAAPR KPQNA

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.