Factsheet for Zm00001d041692_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid, secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16101	Sorghum	cytosol, nucleus, plastid	83.43	84.04
Os12t0540800-01	Rice	extracellular	66.3	68.31
HORVU5Hr1G025310.1	Barley	cytosol	58.93	66.53
TraesCS5D01G106400.1	Wheat	cytosol	63.54	65.59
TraesCS5A01G094000.1	Wheat	cytosol	63.35	65.28
TraesCS5B01G100100.1	Wheat	cytosol	63.54	65.22
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	50.46	40.65
GSMUA_Achr6P20340_001	Banana	plastid	50.46	40.18
VIT_14s0060g02410.t01	Wine grape	plastid	48.43	39.02
Zm00001d034758_P003	Maize	plastid	47.88	38.18
CDX74147	Canola	cytosol, nucleus, plastid	45.3	36.94
CDY05568	Canola	plastid	45.3	36.88
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	45.3	36.88
KRG92884	Soybean	nucleus	44.57	36.72
CDY25029	Canola	cytosol, nucleus, plastid	45.3	36.72
Zm00001d046434_P003	Maize	plastid	41.07	36.62
CDY05166	Canola	cytosol, nucleus, plastid	44.75	36.49
CDY18797	Canola	cytosol	44.75	36.49
Bra040219.1-P	Field mustard	cytosol	44.57	36.39
CDY27769	Canola	cytosol	44.57	36.34
CDY40708	Canola	cytosol	44.57	36.34
Solyc01g099350.2.1	Tomato	extracellular	44.75	36.32
Bra039439.1-P	Field mustard	cytosol	44.57	36.28
AT3G05420.2	Thale cress	cytosol	44.57	36.17
KRG96823	Soybean	cytosol, plastid	43.09	36.06
KRH68531	Soybean	nucleus	43.65	36.02
Bra001147.1-P	Field mustard	cytosol	45.3	36.02
CDY18777	Canola	cytosol	44.01	35.94
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	44.2	35.93
Zm00001d012892_P002	Maize	plastid	48.62	33.72
PGSC0003DMT400063503	Potato	extracellular	20.26	32.84
Zm00001d051876_P002	Maize	nucleus	34.44	31.48
Zm00001d048718_P010	Maize	mitochondrion	24.68	19.28
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	25.78	18.3
Zm00001d034759_P001	Maize	cytosol	16.76	18.2
Zm00001d019221_P001	Maize	cytosol	12.15	17.28
Zm00001d009123_P001	Maize	cytosol	19.15	16.64
Zm00001d040606_P001	Maize	cytosol	18.23	15.97
Zm00001d037558_P001	Maize	cytosol	2.95	13.22
Zm00001d031492_P001	Maize	cytosol	3.31	12.59
Zm00001d038406_P001	Maize	cytosol	4.79	11.93
Zm00001d003259_P006	Maize	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	14.18	10.85
Zm00001d021624_P002	Maize	mitochondrion	16.76	8.39

Protein Annotations

EnsemblPlants:Zm00001d041692_P001	EnsemblPlants:Zm00001d041692_T001	EnsemblPlantsGene:Zm00001d041692	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil
PANTHER:PTHR23244	PANTHER:PTHR23244:SF398	PFAM:PF01344	PFAM:PF13415	ProteinID:ONM33481.1	SUPFAM:SSF117281
SUPFAM:SSF50965	UniParc:UPI000844BBDD	UniProt:A0A1D6MXM9	MapMan:35.1	:	:

Description

Acyl-CoA-binding domain-containing protein 4

Coordinates

chr3:+:133565973..133578456

Molecular Weight (calculated)

60111.4 Da

IEP (calculated)

4.991

GRAVY (calculated)

-0.444

Length

543 amino acids

Sequence
(BLAST)

001: MTVAVLTAAK ESVAMGSAIL NSIAPEEPKV VVPEYGETAD IQDKEVSMEQ LCSISTYDQW TPLSVSGQLP KPRYKHGAVV IQQKMYVFGG NHNGRYLGDI
101: QVLDFKTLSW SKLEAKSQAE PSESAGAVPF SACAGHSVIQ WGNKILCLAG HTREPAESLS VKEFDPQTCT WSTLRTYGRS PSSRGGQSVT LVGDTLVVFG
201: GEGHGRSLLN DLHILDLETM TWDEFETTGT PPSPRSEHAA ACFAERYLLI FGGGSHSTCF SDLHLLDTQT MEWSRPKQQG VTPESRAGHA GVTIGEYWFI
301: TGGGNSRKGV SDTLVLNLST YEWSVLTNLE ARAPPVSEAY ALKASLKPSV PSQQINESDT NGFSPLSVAE NSSRKVIFEI EELKDEKIVS LVCSLKHAFF
401: HYQPGNRADN SKTLGQVVMV EQNEIENRLN QEHLQSLRLK QELTGLENRN AELTEASYIS LTKLCKTAEN ELHLVQDQLS IEQTRASKFE NEISDIQQRL
501: QKMDTLEKEI ESLRYELDST VSEEESSSGN ELHRSRGFWR WNG

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.