Factsheet for Os12t0540800-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G025310.1	Barley	cytosol	68.12	74.64
TraesCS5D01G106400.1	Wheat	cytosol	74.38	74.52
TraesCS5A01G094000.1	Wheat	cytosol	74.19	74.19
TraesCS5B01G100100.1	Wheat	cytosol	74.0	73.72
EES16101	Sorghum	cytosol, nucleus, plastid	72.68	71.06
Zm00001d041692_P001	Maize	nucleus	68.31	66.3
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	58.06	45.4
GSMUA_Achr6P20340_001	Banana	plastid	57.5	44.43
VIT_14s0060g02410.t01	Wine grape	plastid	56.17	43.92
Os03t0835600-01	Rice	plastid	54.08	43.51
Os02t0822800-01	Rice	cytosol	40.99	41.62
KRH68531	Soybean	nucleus	51.61	41.34
KRG96823	Soybean	cytosol, plastid	50.85	41.29
Solyc01g099350.2.1	Tomato	extracellular	51.99	40.96
CDX74147	Canola	cytosol, nucleus, plastid	51.61	40.84
KRG92884	Soybean	nucleus	51.04	40.82
CDY40708	Canola	cytosol	50.85	40.24
CDY18797	Canola	cytosol	50.66	40.09
CDY05166	Canola	cytosol, nucleus, plastid	50.66	40.09
CDY18777	Canola	cytosol	50.47	40.0
Bra040219.1-P	Field mustard	cytosol	50.47	40.0
Bra001147.1-P	Field mustard	cytosol	51.8	39.97
CDY27769	Canola	cytosol	50.47	39.94
AT3G05420.2	Thale cress	cytosol	50.66	39.91
Bra039439.1-P	Field mustard	cytosol	50.47	39.88
CDY25029	Canola	cytosol, nucleus, plastid	50.09	39.4
CDY05568	Canola	plastid	49.72	39.28
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	49.72	39.28
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	49.34	38.92
PGSC0003DMT400063503	Potato	extracellular	21.25	33.43
Os09t0249000-01	Rice	cytosol, plasma membrane, plastid	14.99	23.8
Os12t0538800-01	Rice	mitochondrion, nucleus	30.36	22.92
Os11t0657000-01	Rice	mitochondrion	6.26	20.37
Os03t0835800-02	Rice	cytosol	19.35	20.36
Os01t0300900-01	Rice	cytosol	19.92	16.83
Os04t0483600-01	Rice	nucleus	17.84	14.2
Os07t0515000-01	Rice	cytosol	0.57	6.82

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:4352434	ProteinID:ABA99445.2	EMBL:AK100499	ProteinID:BAF29969.1
ProteinID:BAT17498.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	EnsemblPlantsGene:Os12g0540800	EnsemblPlants:Os12t0540800-01	PFAM:PF01344	PFAM:PF13415
PANTHER:PTHR23244	PANTHER:PTHR23244:SF398	UniProt:Q2QP63	SUPFAM:SSF117281	UniParc:UPI0000680ED1	RefSeq:XP_015620245.1
SEG:seg	:	:	:	:	:

Description

Galactose oxidase/kelch, beta-propeller domain containing protein. (Os12t0540800-01);Hypothetical conserved gene. (Os12t0540800-02)

Coordinates

chr12:+:21619517..21624945

Molecular Weight (calculated)

57742.6 Da

IEP (calculated)

4.950

GRAVY (calculated)

-0.534

Length

527 amino acids

Sequence
(BLAST)

001: MASAKVSHPV KSASEESKVL VVENGKMVDV QDKEITMEGL CSISSYDQWA RIPVSGPLPK PRYKHAAAVV QEKMYVFGGN HNGRYLGDMQ VLDFKCLSWS
101: KLEAKIQSEE PSDLTGTASL PPCAGHALVP WGNKILCLAG HTREPTESLS VKEFDPQTCT WSTLRTYGRS PSSCGGQSVT LVGGTLVVFG GEGDGRSLLN
201: DLHVLDLETM TWDEFETTGT PPSPRSEHAA ACYADRYLLI FGGGSHSTCF SDLHLLDMQT MEWSRPEHQG ITPEPRAGHA GVTVGENWFI TGGGNNKKGV
301: PETLVLNMST FVWSVVTGLE GRAPPTSEGS SLVLHKVNGE DFLVSFGGYS GRYSNEIYAL KSSRKSGVPS GQLNEPETNG LASVAENSSR GVIFEIEELQ
401: DEKTIKRADT SKTLLQAVKG EKSHIEEKLN QEELQSSRLK QELANVETKN VELTKELDLV RNQLSAEEAR ASQLENEISD LQQRLQKMET LEKESESLRL
501: EKDAESDDSS SGSNQRPADK GFWRWNG

Best Arabidopsis Sequence Match ( AT3G05420.2 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INQRAKDEPV VENGSTFSET KTISTENGRL AETQDKDVVS EDSNTVSVYN QWTAPQTSGQ RPKARYEHGA AVIQDKMYIY
201: GGNHNGRYLG DLHVLDLKSW TWSRVETKVA TESQETSTPT LLAPCAGHSL IAWDNKLLSI GGHTKDPSES MQVKVFDPHT ITWSMLKTYG KPPVSRGGQS
301: VTMVGKTLVI FGGQDAKRSL LNDLHILDLD TMTWDEIDAV GVSPSPRSDH AAAVHAERFL LIFGGGSHAT CFDDLHVLDL QTMEWSRPAQ QGDAPTPRAG
401: HAGVTIGENW FIVGGGDNKS GASESVVLNM STLAWSVVAS VQGRVPLASE GLSLVVSSYN GEDVLVAFGG YNGRYNNEIN LLKPSHKSTL QTKTLEAPLP
501: GSLSAVNNAT TRDIESEVEV SQEGRVREIV MDNVNPGSKV EGNSERIIAT IKSEKEELEA SLNKERMQTL QLRQELGEAE LRNTDLYKEL QSVRGQLAAE
601: QSRCFKLEVD VAELRQKLQT LETLQKELEL LQRQKAASEQ AAMNAKRQGS GGVWGWLAGS PQEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.