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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG96823 Soybean cytosol, plastid 83.31 84.59
KRH68531 Soybean nucleus 83.46 83.59
VIT_14s0060g02410.t01 Wine grape plastid 76.33 74.63
Solyc01g099350.2.1 Tomato extracellular 72.99 71.9
CDY27769 Canola cytosol 72.38 71.62
CDY05166 Canola cytosol, nucleus, plastid 72.38 71.62
Bra039439.1-P Field mustard cytosol 72.08 71.21
AT3G05420.2 Thale cress cytosol 72.23 71.15
CDY18777 Canola cytosol 70.71 70.08
CDY18797 Canola cytosol 70.71 69.97
Bra040219.1-P Field mustard cytosol 70.56 69.92
PGSC0003DMT400063503 Potato extracellular 35.36 69.55
AT5G27630.3 Thale cress cytosol, mitochondrion, nucleus, plastid 70.41 69.46
CDY40708 Canola cytosol 69.65 68.92
CDX74147 Canola cytosol, nucleus, plastid 69.35 68.62
Bra001147.1-P Field mustard cytosol 69.65 67.2
Bra020582.1-P Field mustard cytosol, nucleus, plastid 66.92 66.12
CDY25029 Canola cytosol, nucleus, plastid 66.77 65.67
CDY05568 Canola plastid 66.31 65.52
GSMUA_Achr2P02340_001 Banana cytosol, mitochondrion, nucleus, plastid 65.55 64.09
Os03t0835600-01 Rice plastid 62.97 63.36
EER90565 Sorghum plastid 62.82 62.82
TraesCS4A01G356400.2 Wheat plastid 62.97 62.03
TraesCS5B01G515800.1 Wheat cytosol, peroxisome, plastid 62.82 61.88
GSMUA_Achr6P20340_001 Banana plastid 64.04 61.88
TraesCS5D01G515900.2 Wheat plastid 62.67 61.73
HORVU5Hr1G117970.2 Barley plastid 62.37 59.05
Zm00001d034758_P003 Maize plastid 61.0 59.03
HORVU5Hr1G025310.1 Barley cytosol 39.45 54.05
Zm00001d046434_P003 Maize plastid 49.17 53.2
TraesCS5D01G106400.1 Wheat cytosol 41.88 52.47
TraesCS5A01G094000.1 Wheat cytosol 41.73 52.18
TraesCS5B01G100100.1 Wheat cytosol 41.58 51.8
Os12t0540800-01 Rice extracellular 40.82 51.04
Zm00001d012892_P002 Maize plastid 59.79 50.32
EES16101 Sorghum cytosol, nucleus, plastid 39.76 48.61
Zm00001d041692_P001 Maize nucleus 36.72 44.57
KRH34674 Soybean cytosol 31.87 41.67
KRG92113 Soybean cytosol 23.07 41.42
KRG92111 Soybean cytosol 8.19 39.42
KRH43755 Soybean cytosol 11.38 22.87
KRH11220 Soybean mitochondrion 22.76 20.89
KRH21038 Soybean mitochondrion 22.31 20.7
KRH02216 Soybean mitochondrion 22.15 20.62
KRH50909 Soybean nucleus 22.0 19.95
KRG92046 Soybean cytosol 13.96 18.47
KRG90521 Soybean peroxisome 17.45 18.23
KRH33805 Soybean nucleus 17.45 18.23
KRH68432 Soybean cytosol, nucleus, plastid 17.15 17.82
KRH54725 Soybean cytosol 16.24 17.46
KRH63188 Soybean cytosol 15.78 16.97
KRH56785 Soybean nucleus 15.78 16.51
KRG96716 Soybean endoplasmic reticulum, nucleus, plasma membrane 17.91 16.46
KRH03160 Soybean cytosol 15.63 16.45
KRH63715 Soybean nucleus 15.78 15.76
KRH54239 Soybean nucleus 15.33 15.3
KRH51088 Soybean cytosol 19.58 12.0
KRH02069 Soybean cytosol 10.32 11.04
Protein Annotations
Gene3D:1.20.80.10EntrezGene:100786884Gene3D:2.120.10.80MapMan:35.1EMBL:ACUP02012770InterPro:Acyl-CoA-binding_protein
InterPro:Acyl-CoA-binding_sfncoils:CoilInterPro:FERM/acyl-CoA-bd_prot_sfEnsemblPlantsGene:GLYMA_20G235500GO:GO:0000062GO:GO:0003674
GO:GO:0005488GO:GO:0005515UniProt:I1NJ06InterPro:IPR000582InterPro:IPR014352InterPro:IPR015915
EnsemblPlants:KRG92884ProteinID:KRG92884ProteinID:KRG92884.1InterPro:Kelch-typ_b-propellerInterPro:Kelch_1PFAM:PF00887
PFAM:PF01344PFAM:PF13415PFAM:PF13418PFscan:PS51228PANTHER:PTHR23244PANTHER:PTHR23244:SF336
SUPFAM:SSF117281SUPFAM:SSF47027UniParc:UPI000233DDCASEG:seg::
Description
hypothetical protein
Coordinates
chr20:+:46803615..46812100
Molecular Weight (calculated)
72012.6 Da
IEP (calculated)
5.391
GRAVY (calculated)
-0.353
Length
659 amino acids
Sequence
(BLAST)
001: MARASSGLQY PERFYAAASY VGFDGSTKSL TSKFSNSTAL LLYSLYQQAS IGPCNVPEPS SWKLVEHSKW ASWNQLGNMS STEAMRLFVK ILEEEDPGWY
101: SRASNSVLDP VVDVQMNHNS KVEPVIENAN AYPEIKTIST ENGSHVGTQD KDVVIEGFGS VGVYDQWVAP PVSGQRPKAR YEHGAAVVQD KLYIYGGNHN
201: GRYLNDLHVL DLRSWTWSKI EAEVVESTNS SSITFPCAGH SLIPWENKLL SIAGHTKDPN ESIQVKVFDL PNATWTTLKT YGKPPVSRGG QSVTFVGTSL
301: VIFGGEDAKR TLLNDLHILD LETMTWDEID AVGVPPSPRS DHAAAVHVER YLLIFGGGSH ATCYNDLHVL DMQTMEWSRP TQLGEIPTPR AGHAGVTVGE
401: NWFIVGGGDN KSGVSETVVL NMATLTWSVV TSVQGRVPVA SEGSSLVVSS YDGEDILVSF GGYNGHYNNE VYVLKPSHKS TLQSKLIENP IPYSVSGAHN
501: AANATRDLDS EAGHKGIIKE LVMDSVDSIK SKGDVITVLK VEKEDLESSL YKEKLQTLQL KQELSETKTR NSDLCKELQS IRGQLASEQS RCFKLEVEVA
601: ELSQKLQTIG TLQKELELLQ RQKAASELAA LNAKQKQGSG GVWGWLAGAP PPTQKEDDG
Best Arabidopsis Sequence Match ( AT3G05420.2 )
(BLAST)
001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INQRAKDEPV VENGSTFSET KTISTENGRL AETQDKDVVS EDSNTVSVYN QWTAPQTSGQ RPKARYEHGA AVIQDKMYIY
201: GGNHNGRYLG DLHVLDLKSW TWSRVETKVA TESQETSTPT LLAPCAGHSL IAWDNKLLSI GGHTKDPSES MQVKVFDPHT ITWSMLKTYG KPPVSRGGQS
301: VTMVGKTLVI FGGQDAKRSL LNDLHILDLD TMTWDEIDAV GVSPSPRSDH AAAVHAERFL LIFGGGSHAT CFDDLHVLDL QTMEWSRPAQ QGDAPTPRAG
401: HAGVTIGENW FIVGGGDNKS GASESVVLNM STLAWSVVAS VQGRVPLASE GLSLVVSSYN GEDVLVAFGG YNGRYNNEIN LLKPSHKSTL QTKTLEAPLP
501: GSLSAVNNAT TRDIESEVEV SQEGRVREIV MDNVNPGSKV EGNSERIIAT IKSEKEELEA SLNKERMQTL QLRQELGEAE LRNTDLYKEL QSVRGQLAAE
601: QSRCFKLEVD VAELRQKLQT LETLQKELEL LQRQKAASEQ AAMNAKRQGS GGVWGWLAGS PQEKDDDSP
Arabidopsis Description
ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.