CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21038	Soybean	mitochondrion	90.95	91.97
KRH02216	Soybean	mitochondrion	77.02	78.11
PGSC0003DMT400058372	Potato	mitochondrion	34.26	76.88
KRH50909	Soybean	nucleus	75.49	74.55
VIT_05s0020g01740.t01	Wine grape	mitochondrion	71.17	71.27
Solyc01g067480.2.1	Tomato	mitochondrion	63.79	69.71
CDY13903	Canola	mitochondrion	59.33	63.2
Bra002170.1-P	Field mustard	mitochondrion	60.31	61.86
CDX92598	Canola	mitochondrion	60.03	61.57
AT5G18590.1	Thale cress	mitochondrion	60.45	61.3
PGSC0003DMT400050298	Potato	cytosol, plastid	32.03	61.17
GSMUA_Achr3P23920_001	Banana	mitochondrion	55.99	56.54
PGSC0003DMT400058369	Potato	mitochondrion	24.65	56.19
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	53.48	53.93
TraesCSU01G068300.1	Wheat	mitochondrion	50.97	53.74
OQU83951	Sorghum	mitochondrion	51.25	53.57
TraesCS4D01G147200.1	Wheat	mitochondrion	50.84	53.36
TraesCS4A01G167800.1	Wheat	mitochondrion	50.42	52.92
KXG23613	Sorghum	mitochondrion	50.56	52.46
HORVU4Hr1G032550.32	Barley	mitochondrion	49.86	52.26
Zm00001d048718_P010	Maize	mitochondrion	50.14	51.8
Os12t0538800-01	Rice	mitochondrion, nucleus	49.44	50.86
TraesCS5A01G094400.1	Wheat	mitochondrion	47.91	50.07
TraesCS5D01G106700.1	Wheat	mitochondrion	47.77	50.0
TraesCS5B01G100500.1	Wheat	mitochondrion	47.49	49.71
HORVU5Hr1G025430.25	Barley	mitochondrion	44.29	45.49
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	47.91	44.97
Os11t0657000-01	Rice	mitochondrion	9.33	41.36
KRG92113	Soybean	cytosol	14.48	28.34
KRH34674	Soybean	cytosol	19.64	27.98
KRG92111	Soybean	cytosol	5.15	27.01
KRH68531	Soybean	nucleus	22.28	24.32
KRG96823	Soybean	cytosol, plastid	21.87	24.19
KRG92884	Soybean	nucleus	20.89	22.76
KRH43755	Soybean	cytosol	9.89	21.65
KRH33805	Soybean	nucleus	16.02	18.23
KRG90521	Soybean	peroxisome	16.02	18.23
KRH68432	Soybean	cytosol, nucleus, plastid	14.76	16.72
KRG92046	Soybean	cytosol	11.42	16.47
KRH63715	Soybean	nucleus	13.79	15.0
KRH54239	Soybean	nucleus	13.65	14.85
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	14.76	14.78
KRH54725	Soybean	cytosol	12.4	14.52
KRH63188	Soybean	cytosol	12.12	14.19
KRH56785	Soybean	nucleus	12.26	13.97
KRH03160	Soybean	cytosol	12.12	13.9
KRH02069	Soybean	cytosol	10.03	11.69
KRH51088	Soybean	cytosol	16.16	10.79

Protein Annotations

EMBL:ACUP02009191	EnsemblPlants:KRH11220	EnsemblPlantsGene:GLYMA_15G096200	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil	PANTHER:PTHR23244
PANTHER:PTHR23244:SF308	PFAM:PF01344	PFAM:PF13418	ProteinID:KRH11220	ProteinID:KRH11220.1	SEG:seg
SUPFAM:SSF117281	UniParc:UPI0006ED617C	UniProt:A0A0R0G990	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr15:-:7490015..7496549

Molecular Weight (calculated)

79126.0 Da

IEP (calculated)

9.084

GRAVY (calculated)

-0.441

Length

718 amino acids

Sequence
(BLAST)

001: MFGFSRRHMK LGRLKVQLSD TTQGTRSPIR HHKRNVNSTG DRVAGTSGHS EEIDCPLSSA APEMHTCTAG SSENWMVLSI AGNKPTPRSH HAAAVIQNKM
101: IVVGGESGSG LLDGVQVLNF DRFSWTTASS KLYLSPSSLP LKIPACKGHC LVSWGKKALL IGGKTDPASD KISVWAFDTE TECWSLMEAK GDIPVARSGH
201: TVVMANSVLI LFGGEDAKRR KLNDLHMFDL KSLTWLPLHC TGAAPCPRFN HVAALYDGKI LFIFGGASKS RTLNDLYSLD FETMAWSRIK IHGFHPSPRA
301: GCCGVLCGTK WYITGGGSKK KRHGETLVYD VVKSEWSVAI TSPPSSITTN KGFSVALVQH KDKDFLVAFG GSKKEPSNQV EVLITEKIES VLGRRPTSTK
401: DPRSILLEKH SLSAGLASQL KNDSSQHLIN SVARQNLASV IEHSSERKSL SESLLVQDSN SLPTNISLRR QFDHDEECNA DVRIDKHSED ESSFPRNSLQ
501: AADHKTNQND PRNHMSRSGA KTNMEEQVSV SRSSNQKNLG FGNPVLESDD VSFPENSKSG SLSAASDIHH YYETKVASLM RKFGILEGQL AVALASREAS
601: EKSLASAFKS RQEMERKLAD TLKEMELLRE KLVSAELVQE EANNLSNMVH ADNVRLEHDV AFLKAVLDDT QKELHSTRGV LAAERTRAFQ LQVEVFHLKQ
701: RLQSMEKRAP TPRKPFQV

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.