Factsheet for TraesCS5B01G100500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G106700.1	Wheat	mitochondrion	97.08	97.08
TraesCS5A01G094400.1	Wheat	mitochondrion	96.65	96.51
HORVU5Hr1G025430.25	Barley	mitochondrion	90.23	88.56
Os12t0538800-01	Rice	mitochondrion, nucleus	80.17	78.8
KXG23613	Sorghum	mitochondrion	76.82	76.16
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	72.45	64.97
PGSC0003DMT400058372	Potato	mitochondrion	25.95	55.62
GSMUA_Achr3P23920_001	Banana	mitochondrion	55.39	53.45
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	52.92	50.98
VIT_05s0020g01740.t01	Wine grape	mitochondrion	53.06	50.77
Solyc01g067480.2.1	Tomato	mitochondrion	48.1	50.23
PGSC0003DMT400050298	Potato	cytosol, plastid	27.11	49.47
KRH02216	Soybean	mitochondrion	50.44	48.87
CDY13903	Canola	mitochondrion	47.67	48.52
KRH21038	Soybean	mitochondrion	49.85	48.17
KRH11220	Soybean	mitochondrion	49.71	47.49
KRH50909	Soybean	nucleus	50.15	47.32
AT5G18590.1	Thale cress	mitochondrion	48.54	47.03
Bra002170.1-P	Field mustard	mitochondrion	47.52	46.57
CDX92598	Canola	mitochondrion	47.38	46.43
PGSC0003DMT400058369	Potato	mitochondrion	16.62	36.19
TraesCS5B01G100100.1	Wheat	cytosol	21.72	28.17
TraesCS6B01G450700.1	Wheat	cytosol	19.39	25.09
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	23.76	24.36
TraesCS5B01G165000.1	Wheat	mitochondrion	10.35	21.71
TraesCS5B01G515900.1	Wheat	mitochondrion	14.87	20.28
TraesCS3B01G221000.2	Wheat	cytosol, mitochondrion, nucleus, vacuole	14.72	16.69
TraesCS2B01G361300.1	Wheat	nucleus	14.87	15.43
TraesCS2B01G248800.1	Wheat	cytosol	15.74	9.94

Protein Annotations

EnsemblPlants:TraesCS5B01G100500.1	EnsemblPlantsGene:TraesCS5B01G100500	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	ncoils:Coil	PANTHER:PTHR23244	PANTHER:PTHR23244:SF414	PFAM:PF13418	SEG:seg
SUPFAM:SSF117281	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:133594459..133599587

Molecular Weight (calculated)

75260.8 Da

IEP (calculated)

9.434

GRAVY (calculated)

-0.576

Length

686 amino acids

Sequence
(BLAST)

001: MFAFSRRRMK LGRSKGHKSD PLHGSRSPGG HLSLSNGGDP ITASVSGRAD DLAYRCSSDS FDLDARALDS SENWAVLPTE GDKPAPRFSH AAAIVGSKMV
101: VFGGDSGHHL LDDTKILNLE KLTWDSTTPK VLPSPIRSTS KLPACKGHCM VSWGNSVILV GGRSEPATDR LSVWAFNTET EIWSLMEAKG DIPAARSGHT
201: VTRAGAMLIV FGGEDTKGKK RHDLHMFDLK SSTWLPLNYK GSGPSPRSNH IAALYDDRVL LIFGGHSKSK TLNDLFSLDF ETMVWSRVKT NGPHPSPRAG
301: CSGALCGTKW YITGGGSKKK RQAETWVFDV LESKWTVRAV PPSSSITTKK GFSMVPLYHR DKIVLVAFGG NKKDPSDKVE VLVVLQNDHS FSWRSAPDVD
401: PLLYEYSPST KELAGHLNKC APLYSNSSVA RHSLASTVER ASREEDGALG TSLHRKYGQV EDCSLAQKLE KPIDDDKYDD ADDCSSCPAS TPKDHRSKRT
501: GADTQTDMAR TVAVKEENAD NQGPSGRRIA RSSSDISHLY NTKITDLIRR NAALEDQLVA ALASKEQAEK NLSLVMSSRE QLEKRLASRG KEAELLKEKI
601: AGLELAQEES NSLSNAVHAD NVRLEREVAF LKAVADETRK EMHSTRRVLA GEQSRTFQLQ VEVFHLKQRL QTAKGRSGTP RKPHNP

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.