Factsheet for TraesCS5D01G106700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G094400.1	Wheat	mitochondrion	97.52	97.38
TraesCS5B01G100500.1	Wheat	mitochondrion	97.08	97.08
HORVU5Hr1G025430.25	Barley	mitochondrion	89.8	88.13
Os12t0538800-01	Rice	mitochondrion, nucleus	80.17	78.8
KXG23613	Sorghum	mitochondrion	76.09	75.43
TraesCS4D01G147200.1	Wheat	mitochondrion	69.24	69.44
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	72.01	64.58
PGSC0003DMT400058372	Potato	mitochondrion	25.8	55.31
GSMUA_Achr3P23920_001	Banana	mitochondrion	55.39	53.45
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	52.92	50.98
VIT_05s0020g01740.t01	Wine grape	mitochondrion	52.77	50.49
Solyc01g067480.2.1	Tomato	mitochondrion	48.1	50.23
PGSC0003DMT400050298	Potato	cytosol, plastid	27.26	49.73
KRH02216	Soybean	mitochondrion	50.73	49.15
CDY13903	Canola	mitochondrion	47.81	48.66
KRH21038	Soybean	mitochondrion	49.71	48.03
KRH11220	Soybean	mitochondrion	50.0	47.77
KRH50909	Soybean	nucleus	50.29	47.46
AT5G18590.1	Thale cress	mitochondrion	48.25	46.75
Bra002170.1-P	Field mustard	mitochondrion	47.67	46.71
CDX92598	Canola	mitochondrion	47.52	46.57
PGSC0003DMT400058369	Potato	mitochondrion	16.76	36.51
TraesCS5D01G106400.1	Wheat	cytosol	21.72	28.33
TraesCS6D01G389800.2	Wheat	cytosol	19.39	24.86
TraesCS5D01G515900.2	Wheat	plastid	24.05	24.66
TraesCS5D01G172400.1	Wheat	mitochondrion	10.5	22.02
TraesCS5D01G516000.1	Wheat	mitochondrion	14.72	19.73
TraesCS3D01G195400.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	15.16	17.33
TraesCS2D01G342300.1	Wheat	nucleus	14.72	16.58
TraesCS2D01G229200.1	Wheat	cytosol	15.31	9.66

Protein Annotations

EnsemblPlants:TraesCS5D01G106700.1	EnsemblPlantsGene:TraesCS5D01G106700	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil	PANTHER:PTHR23244	PANTHER:PTHR23244:SF414
PFAM:PF01344	PFAM:PF13418	SEG:seg	SUPFAM:SSF117281	MapMan:35.1	:

Description

No Description!

Coordinates

chr5D:-:120341231..120346355

Molecular Weight (calculated)

75415.9 Da

IEP (calculated)

9.217

GRAVY (calculated)

-0.595

Length

686 amino acids

Sequence
(BLAST)

001: MFAFSRRRMK IGRSKGHKSD PLHGSRSPGG HVSLSNGGDP ITASVSGRAD DLAYRCSSDS FDLDARALDS SENWAVLPTE GDKPAPRFSH AAAIVGSKMV
101: VFGGDSGHQL LDDTKMLNLE KLTWDSTTPK VLPSPIRSTS KLPACKGHCM VSWGNSVILV GGRSEPATDR LSVWSFNTET EIWSLMEAKG DIPAARSGHT
201: VTRAGATLIL FGGEDAKGKK RHDLHMFDLK SSTWLPLNYK GSGPSPRSNH VAALYDDRVL LIFGGHSKSK TLNDLFSLDF ETMVWSRVKT NGPHPSPRAD
301: CSGALCGTKW YITGGGSKKK RQAETWVFDV LESKWTVRAV PPSSSITTKK GFSMVPLYHR DKIVLVAFGG NKKDPSDKVE VLVVLQNDHS YSWRSAPDVD
401: PLLYEYSPST KELAGHLNKC APLYSNSSVA RHSLASTVER ASREEHGALG TSLHRKYGQV EDCSLAQKLE KLIDDDKYDD VDDCSSCPAS TPKDQRSKRT
501: GADTRTDMAR TVALKEENAD NQGPSGRRIA RSSSDISHLY NTKITDLIRR NAALEDQLAA ALESKEQAEK NLSLVMSSRE QLEKRLASRG KEAELLKEKI
601: AGLELAQEES NSLSNAVHAD NVRLEREVAF LKAVADETRK EMHSTRRVLA GEQSRTFQLQ VEVFHLKQRL QTAEGRSGTP RKPHNP

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.