Factsheet for TraesCS5D01G106400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G094000.1	Wheat	cytosol	97.34	97.15
TraesCS5B01G100100.1	Wheat	cytosol	96.01	95.46
HORVU5Hr1G025310.1	Barley	cytosol	87.26	95.43
Os12t0540800-01	Rice	extracellular	74.52	74.38
EES16101	Sorghum	cytosol, nucleus, plastid	71.86	70.13
Zm00001d041692_P001	Maize	nucleus	65.59	63.54
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	58.17	45.4
TraesCS5D01G515900.2	Wheat	plastid	57.6	45.29
GSMUA_Achr6P20340_001	Banana	plastid	58.37	45.01
VIT_14s0060g02410.t01	Wine grape	plastid	55.7	43.47
Solyc01g099350.2.1	Tomato	extracellular	53.8	42.3
KRG96823	Soybean	cytosol, plastid	52.09	42.22
KRH68531	Soybean	nucleus	52.66	42.1
CDX74147	Canola	cytosol, nucleus, plastid	53.04	41.89
KRG92884	Soybean	nucleus	52.47	41.88
CDY27769	Canola	cytosol	52.85	41.74
CDY05166	Canola	cytosol, nucleus, plastid	52.85	41.74
Bra039439.1-P	Field mustard	cytosol	52.85	41.68
Bra040219.1-P	Field mustard	cytosol	52.66	41.65
CDY18777	Canola	cytosol	52.28	41.35
CDY18797	Canola	cytosol	52.28	41.29
Bra001147.1-P	Field mustard	cytosol	53.23	41.0
CDY40708	Canola	cytosol	51.9	40.99
AT3G05420.2	Thale cress	cytosol	51.71	40.66
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	51.14	40.33
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	51.14	40.27
CDY05568	Canola	plastid	50.95	40.18
CDY25029	Canola	cytosol, nucleus, plastid	50.57	39.7
TraesCS6D01G389800.2	Wheat	cytosol	37.45	36.82
PGSC0003DMT400063503	Potato	extracellular	22.24	34.93
TraesCS5D01G172400.1	Wheat	mitochondrion	15.21	24.46
TraesCS4D01G147200.1	Wheat	mitochondrion	28.71	22.08
TraesCS5D01G106700.1	Wheat	mitochondrion	28.33	21.72
TraesCS5D01G516000.1	Wheat	mitochondrion	18.63	19.14
TraesCS3D01G195400.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	20.34	17.83
TraesCS2D01G342300.1	Wheat	nucleus	16.35	14.12
TraesCS2D01G229200.1	Wheat	cytosol	17.68	8.56

Protein Annotations

EnsemblPlants:TraesCS5D01G106400.1	EnsemblPlantsGene:TraesCS5D01G106400	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil	PANTHER:PTHR23244
PANTHER:PTHR23244:SF398	PFAM:PF01344	PFAM:PF13415	SEG:seg	SUPFAM:SSF50965	MapMan:35.1

Description

No Description!

Coordinates

chr5D:-:119767349..119771528

Molecular Weight (calculated)

58018.1 Da

IEP (calculated)

5.153

GRAVY (calculated)

-0.568

Length

526 amino acids

Sequence
(BLAST)

001: MPSIQEPLHF KPEEPKVVVA ENEKMVDVQD KEVTMEGLCS VAAYDQWTPL SVPGQRPKPR YKHGAAVVQE KMYVFGGNHN GRYLGDIQVL DFKSLSWSKL
101: EAKIQSESAE PVFVAPCAGH SLIPSGNKIL SLAGHTREHT ESLSVKEFDP QTCTWSILRT YGKPPSSRGG QSVTCVGDTL VVFGGEGGGR SLLNDLHVLD
201: LETMTWDEFE STGTPPSPRS EHAAACYADR YLLIFGGGSH STCFSDLYLL DLQTMEWSRP EQHGIIPEPR AGHAGVTVGD NWVITGGGNS KKGVPETLVL
301: NMSTLVWSVV TSFEGRAPPT SEGSSLVLHT INGEDFLLSF GGYSGRYSNE VYALKTSLRP SVSPSRIDEL ETNGMTPLSA EVNSSRGPIF EIEELRDDKN
401: NKGGDIKTLV QAVKHEKSQV EKKLEQEKLQ SFHLKKELAD VENKNAELTK ELQSVRDQLS DEAARASKLE DEVSEIQQRL QKMETLEKEF ELLRSERDGG
501: SDKSGSGSNK RPGSVGFRRW YGDDER

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.