Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G248800.1 | Wheat | cytosol | 97.88 | 97.88 |
| TraesCS2A01G223200.1 | Wheat | cytosol | 97.88 | 97.88 |
| HORVU2Hr1G046680.19 | Barley | cytosol | 94.3 | 93.78 |
| KXG36320 | Sorghum | cytosol, nucleus, peroxisome | 72.86 | 73.27 |
| Zm00001d021624_P002 | Maize | mitochondrion | 71.02 | 71.22 |
| GSMUA_Achr6P29460_001 | Banana | cytosol | 56.67 | 57.73 |
| AT4G04670.1 | Thale cress | cytosol | 49.68 | 54.27 |
| VIT_10s0116g01770.t01 | Wine grape | cytosol | 51.61 | 53.84 |
| Solyc05g055610.2.1 | Tomato | cytosol | 48.94 | 53.52 |
| Bra000803.1-P | Field mustard | cytosol | 48.3 | 53.19 |
| PGSC0003DMT400060067 | Potato | cytosol | 36.43 | 53.01 |
| CDY21313 | Canola | cytosol | 47.56 | 52.12 |
| CDX90875 | Canola | cytosol | 48.3 | 52.03 |
| KRH51088 | Soybean | cytosol | 50.87 | 51.44 |
| KRH02069 | Soybean | cytosol | 25.76 | 45.45 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 5.8 | 19.27 |
| TraesCS5D01G515900.2 | Wheat | plastid | 11.32 | 18.39 |
| TraesCS5D01G516000.1 | Wheat | mitochondrion | 8.37 | 17.77 |
| TraesCS5D01G106400.1 | Wheat | cytosol | 8.56 | 17.68 |
| TraesCS6D01G389800.2 | Wheat | cytosol | 8.46 | 17.2 |
| TraesCS3D01G195400.1 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 8.92 | 16.17 |
| TraesCS4D01G147200.1 | Wheat | mitochondrion | 9.75 | 15.5 |
| TraesCS5D01G106700.1 | Wheat | mitochondrion | 9.66 | 15.31 |
| TraesCS2D01G342300.1 | Wheat | nucleus | 8.28 | 14.78 |
Protein Annotations
| Gene3D:2.120.10.80 | Gene3D:3.30.1960.10 | Gene3D:3.40.50.150 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR015915 | InterPro:IPR030382 | InterPro:IPR036602 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 |
| InterPro:MeTrfase_TRM5/TYW2 | PFAM:PF01344 | PFAM:PF02475 | PFAM:PF02676 | PFAM:PF13418 | PFscan:PS51684 |
| PANTHER:PTHR23245 | PANTHER:PTHR23245:SF25 | InterPro:SAM-dependent_MTases | SUPFAM:SSF111278 | SUPFAM:SSF117281 | SUPFAM:SSF53335 |
| EnsemblPlantsGene:TraesCS2D01G229200 | EnsemblPlants:TraesCS2D01G229200.1 | TIGR:cd02440 | SEG:seg | InterPro:tRNA_yW-synthesising | InterPro:tRNA_yW-synthesising-like_sf |
Description
No Description!
Coordinates
chr2D:-:198621986..198630373
Molecular Weight (calculated)
119218.0 Da
IEP (calculated)
7.863
GRAVY (calculated)
-0.182
Length
1087 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDFARRKAAA LAALSSPAPD KSPKGGVDAP IAPLLDALNS NADLFTTSSC SGRISVLAQP SPQSQAADPK PKKKARGGGW LYISHDPADP DAVVELLFGG
0101: TGCGERGGGD ELVFRFEPMI VAVECRDAAA AAALVAAAIG AGFRESGITS LQRRAMVAIR CSIRMEVPLG LTNELVVSPE YIRYLVRIAN CKMEANKKRM
0201: DGFLDVLQSK GLPGISGLQV RTKKDDHSLG SEVQASLNQS VQTHDELLVT EKRRDSYNCD AGTKGDCGIG ENSIEGSYYE NRDAVRNNIA KHGFGNAERL
0301: MHEGKLSASS GIRSSHLSIT ELKISGEPVE KLFLWGQSAC AFTIGGKQQV LTFGGFGGPG RHSRRNYSLL LDRTSGLLKE INVKDSPSPR MGHTTTAVGN
0401: HIYAVGGRAG PSEILGDVWV LQSTENRWSR VECSGDIFHP RHRHAAAAAA LKIYVFGGLS NEGIYSCLNI LDTESMRWNV ISAAGEWPCA RHSHSLVSYG
0501: STLFMFGGHD GQRALNDFYS FDTTTLSWNK EITSGRTPSP RFSHCMFIYK HYIGILGGCP IRENNQEIAL LHLKHRVWFH VSIPALGQCL CVRSSSVVTD
0601: DDLVVIGGGA SCYAFGTKFC QPVKIDLHLL ESVFELAYKK NDNAVQSWDA TYTMDLKERE QNGTFISHKV KSMVDAATNG IAGSDPLVFQ LEKKYAKLAK
0701: DILKKFGWLD LARKVRVSQD NVLVLFPVSR NFHTLVTDQH SKLLDDDSCI SKGLLGCPEK KLIGDSIALH EALEILSSFH GSFLKDELAL SRKAYKSPQI
0801: IMRELISSLL ERKGMPSWLL EQLPTRWETL GDITVLPKTC FKDLLWESVR EELWQLVAKS LGAQRLARQG KIMPNGTRDS TLELLVGDNG WVTHYENGIS
0901: YSLDATKCMF SSGNRSEKLR MGQLDCRDEV VVDLFSGIGY FVLPFLVKAN AKLVYACEWN PHALEALQRN VMDNHVADRC VILEGDNRLT APKGVADRVC
1001: LGLIPSSECS WATAVRALRV GGGVLHIHGN VNDSDEARWL DNVVESISSI ATARGLSWKV SLEHVERVKW YGPHIRHVVA DVRCGSN
0101: TGCGERGGGD ELVFRFEPMI VAVECRDAAA AAALVAAAIG AGFRESGITS LQRRAMVAIR CSIRMEVPLG LTNELVVSPE YIRYLVRIAN CKMEANKKRM
0201: DGFLDVLQSK GLPGISGLQV RTKKDDHSLG SEVQASLNQS VQTHDELLVT EKRRDSYNCD AGTKGDCGIG ENSIEGSYYE NRDAVRNNIA KHGFGNAERL
0301: MHEGKLSASS GIRSSHLSIT ELKISGEPVE KLFLWGQSAC AFTIGGKQQV LTFGGFGGPG RHSRRNYSLL LDRTSGLLKE INVKDSPSPR MGHTTTAVGN
0401: HIYAVGGRAG PSEILGDVWV LQSTENRWSR VECSGDIFHP RHRHAAAAAA LKIYVFGGLS NEGIYSCLNI LDTESMRWNV ISAAGEWPCA RHSHSLVSYG
0501: STLFMFGGHD GQRALNDFYS FDTTTLSWNK EITSGRTPSP RFSHCMFIYK HYIGILGGCP IRENNQEIAL LHLKHRVWFH VSIPALGQCL CVRSSSVVTD
0601: DDLVVIGGGA SCYAFGTKFC QPVKIDLHLL ESVFELAYKK NDNAVQSWDA TYTMDLKERE QNGTFISHKV KSMVDAATNG IAGSDPLVFQ LEKKYAKLAK
0701: DILKKFGWLD LARKVRVSQD NVLVLFPVSR NFHTLVTDQH SKLLDDDSCI SKGLLGCPEK KLIGDSIALH EALEILSSFH GSFLKDELAL SRKAYKSPQI
0801: IMRELISSLL ERKGMPSWLL EQLPTRWETL GDITVLPKTC FKDLLWESVR EELWQLVAKS LGAQRLARQG KIMPNGTRDS TLELLVGDNG WVTHYENGIS
0901: YSLDATKCMF SSGNRSEKLR MGQLDCRDEV VVDLFSGIGY FVLPFLVKAN AKLVYACEWN PHALEALQRN VMDNHVADRC VILEGDNRLT APKGVADRVC
1001: LGLIPSSECS WATAVRALRV GGGVLHIHGN VNDSDEARWL DNVVESISSI ATARGLSWKV SLEHVERVKW YGPHIRHVVA DVRCGSN
001: MDFEKRKAAT LASIRSSVTD KSPKGFLDEP IIPLLETINH HPSYFTTSSC SGRISILSQP KPKSNDSTKK KARGGSWLYI THDPADSDLV ISLLFPSKSN
101: QIDPIDQPSE LVFRFEPLII AVECKDLGSA QFLVALAISA GFRESGITSC GDGKRVIIAI RCSIRMEVPI GDTEKLMVSP EYVKFLVDIA NEKMDANRKR
201: TDGFSVALAS NGFKNPDEND VDEDDNYENL AANHDSSINN GNLYPGVQKE LIPLEKLSIV GEPVEKLHLW GHSACTIDES DRKEVIVFGG FGGFGRHARR
301: NESLLLNPSC GTLKLIAVNE SPSARLGHTA SMVGDFMFVI GGRADPLNIL NDVWRLDIST GEWSSQRCVG SEFPPRHRHA AASVGTKVYI FGGLYNDKIV
401: SSMHILDTKD LQWKEVEQQG QWPCARHSHA MVAYGSQSFM FGGYNGENVL NDLYSFDVQS CSWKLEVISG KWPHARFSHS MFVYKHTIGI IGGCPVSQNC
501: QELTLLDLKH RLWRSVRLEF MNKELFVRST ASILGDDLIV IGGGAACYAF GTKFSEPVKI NLVQSVTMSE NHLPPQPEDV SLESNKNNAD LKTETSLSQP
601: WVIQLERKYA KFGKDILKSF GWLDLERKVY SNEKGLCICF PVTENFSELF HEKQLLGKDF ERSEENNLTK GLSLKDISCS AALNLLKEHG AKKLINVAFE
701: AKKVAKSPLQ RMREDITSIL KQKGLPEELL DELPQKWERL GDIVVVPATS FKDPTWSSIN DEVWCAVSKS LSANRLARQG RVEPNGTRDS TLEILVGDNG
801: WVNHRENGIL YSFDATKCMF SWGNLSEKLR MGNMACENEV VVDLFAGIGY FVLPFLVRAK AKLVYACEWN PHAIEALRRN VEANSVSERC IILEGDNRIT
901: APKGVADRVN LGLIPSSEGS WVTAIQALRP EGGILHVHGN VKDSDESSWG EHVTKTLSDI ARAEGRSWEV TVEHIEKVKW YAPRIRHLVA DVRCR
101: QIDPIDQPSE LVFRFEPLII AVECKDLGSA QFLVALAISA GFRESGITSC GDGKRVIIAI RCSIRMEVPI GDTEKLMVSP EYVKFLVDIA NEKMDANRKR
201: TDGFSVALAS NGFKNPDEND VDEDDNYENL AANHDSSINN GNLYPGVQKE LIPLEKLSIV GEPVEKLHLW GHSACTIDES DRKEVIVFGG FGGFGRHARR
301: NESLLLNPSC GTLKLIAVNE SPSARLGHTA SMVGDFMFVI GGRADPLNIL NDVWRLDIST GEWSSQRCVG SEFPPRHRHA AASVGTKVYI FGGLYNDKIV
401: SSMHILDTKD LQWKEVEQQG QWPCARHSHA MVAYGSQSFM FGGYNGENVL NDLYSFDVQS CSWKLEVISG KWPHARFSHS MFVYKHTIGI IGGCPVSQNC
501: QELTLLDLKH RLWRSVRLEF MNKELFVRST ASILGDDLIV IGGGAACYAF GTKFSEPVKI NLVQSVTMSE NHLPPQPEDV SLESNKNNAD LKTETSLSQP
601: WVIQLERKYA KFGKDILKSF GWLDLERKVY SNEKGLCICF PVTENFSELF HEKQLLGKDF ERSEENNLTK GLSLKDISCS AALNLLKEHG AKKLINVAFE
701: AKKVAKSPLQ RMREDITSIL KQKGLPEELL DELPQKWERL GDIVVVPATS FKDPTWSSIN DEVWCAVSKS LSANRLARQG RVEPNGTRDS TLEILVGDNG
801: WVNHRENGIL YSFDATKCMF SWGNLSEKLR MGNMACENEV VVDLFAGIGY FVLPFLVRAK AKLVYACEWN PHAIEALRRN VEANSVSERC IILEGDNRIT
901: APKGVADRVN LGLIPSSEGS WVTAIQALRP EGGILHVHGN VKDSDESSWG EHVTKTLSDI ARAEGRSWEV TVEHIEKVKW YAPRIRHLVA DVRCR
Arabidopsis Description
tRNA wybutosine-synthesizing protein 2/3/4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4K1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.