Factsheet for TraesCS5D01G172400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G051310.1	Barley	cytosol, mitochondrion, peroxisome	98.17	98.17
TraesCS5B01G165000.1	Wheat	mitochondrion	98.17	98.17
TraesCS5A01G168200.1	Wheat	mitochondrion	97.86	97.86
Os09t0249000-01	Rice	cytosol, plasma membrane, plastid	83.18	81.93
KXG34722	Sorghum	cytosol	78.59	76.26
Zm00001d019221_P001	Maize	cytosol	78.29	67.02
Solyc05g024410.2.1	Tomato	cytosol, extracellular, plastid	66.06	66.26
PGSC0003DMT400046550	Potato	cytosol	21.71	62.83
VIT_12s0057g01080.t01	Wine grape	cytosol	61.77	61.77
CDY35957	Canola	cytosol	60.55	60.55
CDY28023	Canola	cytosol	60.55	60.55
KRH43755	Soybean	cytosol	60.24	60.06
Bra029671.1-P	Field mustard	cytosol	22.02	59.5
AT3G07720.1	Thale cress	cytosol	59.63	59.27
CDY48738	Canola	cytosol	49.54	50.31
CDY05697	Canola	cytosol	49.54	50.31
CDX85317	Canola	cytosol	48.62	49.38
Bra037506.1-P	Field mustard	cytosol	48.01	48.76
Bra020713.1-P	Field mustard	cytosol	17.74	48.74
AT5G48180.1	Thale cress	cytosol	48.01	48.16
CDX86322	Canola	cytosol	48.01	45.64
CDY30169	Canola	cytosol	44.04	44.58
CDY19142	Canola	cytosol, peroxisome, plastid	46.48	43.3
CDY52048	Canola	plastid	46.18	43.02
Bra039702.1-P	Field mustard	cytosol	33.33	41.44
AT1G54040.2	Thale cress	cytosol	43.12	41.35
CDY36630	Canola	cytosol	43.12	41.11
Bra037958.1-P	Field mustard	cytosol	33.03	41.06
CDY51408	Canola	cytosol	42.81	40.82
CDX96969	Canola	peroxisome	42.2	40.23
CDX94790	Canola	cytosol	42.2	40.23
CDY49014	Canola	cytosol	41.9	39.94
CDY08215	Canola	cytosol	41.59	39.08
CDY64894	Canola	cytosol, mitochondrion	29.97	37.98
CDY30681	Canola	cytosol	40.37	37.93
CDY56199	Canola	cytosol	44.34	35.11
CDX92073	Canola	cytosol	48.32	33.47
CDY65743	Canola	cytosol, peroxisome, plastid	43.12	33.33
AT3G16400.1	Thale cress	cytosol	47.71	33.19
CDY03963	Canola	cytosol	47.09	32.98
AT2G33070.3	Thale cress	cytosol	47.09	32.56
CDY20194	Canola	cytosol	46.18	32.33
CDY03958	Canola	cytosol	45.87	32.19
AT3G16390.2	Thale cress	cytosol	45.87	32.12
CDY28366	Canola	cytosol	45.57	31.91
CDY56200	Canola	endoplasmic reticulum, extracellular, plasma membrane	44.95	31.75
Bra040923.1-P	Field mustard	cytosol	44.95	28.88
CDY24063	Canola	cytosol, mitochondrion	24.77	28.52
AT3G16410.1	Thale cress	cytosol	45.57	24.07
Bra018943.1-P	Field mustard	cytosol	14.37	23.38
Bra022157.1-P	Field mustard	cytosol	8.87	23.02
Bra018944.1-P	Field mustard	cytosol	47.4	19.57
CDY60589	Canola	cytosol	46.79	19.32
Bra021175.1-P	Field mustard	cytosol	14.68	18.53
TraesCS5D01G106400.1	Wheat	cytosol	24.46	15.21
TraesCS5D01G516000.1	Wheat	mitochondrion	20.49	13.09
TraesCS3D01G195400.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	23.85	13.0
TraesCS6D01G389800.2	Wheat	cytosol	21.1	12.9
Bra022159.1-P	Field mustard	cytosol	10.4	12.88
TraesCS2D01G342300.1	Wheat	nucleus	23.24	12.48
TraesCS5D01G515900.2	Wheat	plastid	23.55	11.51
TraesCS5D01G106700.1	Wheat	mitochondrion	22.02	10.5
TraesCS4D01G147200.1	Wheat	mitochondrion	20.49	9.8
TraesCS2D01G229200.1	Wheat	cytosol	19.27	5.8

Protein Annotations

EnsemblPlants:TraesCS5D01G172400.1	EnsemblPlantsGene:TraesCS5D01G172400	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401	PFAM:PF01344
PFAM:PF13418	SEG:seg	SUPFAM:SSF117281	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5D:-:269294641..269296080

Molecular Weight (calculated)

34036.6 Da

IEP (calculated)

4.763

GRAVY (calculated)

-0.140

Length

327 amino acids

Sequence
(BLAST)

001: MAGTGSTWLL LEQKGAGPGA RSSHAITLVG GTAYSFGGEF TPRLPVDNTM YAFDLKAQSW SALDAAGEVP PPRVGVTMTS VGATVFVFGG RDKDHTELNE
101: LYSFDTATST WTLLSSGDDG PPHRSYHSMV ADGEGSRVYV FGGCGNAGRL NDLWAYDVAA GRWEELPSPG AACPPRGGPG LAFAGGKVWV VYGFSGDAEL
201: DDVHSYDPAT GKWAVVDTTG DKPTPRSVLC AAGVGKHVVV FGGEVDPSDL GHLGAGKFSA EAFVLDTDTG AWVRLDDAGS GHHPGPRGWC AFSAGALDGR
301: RGMLVYGGNS PTNDRLGDMF LFTPLLA

Best Arabidopsis Sequence Match ( AT3G07720.1 )
(BLAST)

001: MAATPMEGKW VQLKQKGTGP GARSSHAIAL VGNKMYAFGG EFQPRVPVDN QLYVFDLETQ TWSIQEASGD APPPRVGVAM AAVGPIIYFF GGRDSTHQEL
101: NELYCFNTLT NQWKLLSSGE TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG LEVVQGKIWV VYGFAGEEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK
301: QGLLVYGGNS PSNDRLDDIF FFTPNTLLK

Arabidopsis Description

AT3g07720/F17A17_6 [Source:UniProtKB/TrEMBL;Acc:Q9S7W4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.