Factsheet for HORVU5Hr1G051310.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G172400.1	Wheat	mitochondrion	98.17	98.17
TraesCS5B01G165000.1	Wheat	mitochondrion	98.17	98.17
TraesCS5A01G168200.1	Wheat	mitochondrion	97.55	97.55
Os09t0249000-01	Rice	cytosol, plasma membrane, plastid	83.18	81.93
KXG34722	Sorghum	cytosol	78.9	76.56
Zm00001d019221_P001	Maize	cytosol	78.9	67.54
Solyc05g024410.2.1	Tomato	cytosol, extracellular, plastid	66.36	66.56
PGSC0003DMT400046550	Potato	cytosol	21.71	62.83
VIT_12s0057g01080.t01	Wine grape	cytosol	62.39	62.39
CDY35957	Canola	cytosol	61.16	61.16
CDY28023	Canola	cytosol	61.16	61.16
KRH43755	Soybean	cytosol	60.55	60.37
AT3G07720.1	Thale cress	cytosol	60.24	59.88
Bra029671.1-P	Field mustard	cytosol	22.02	59.5
CDY05697	Canola	cytosol	49.54	50.31
CDY48738	Canola	cytosol	49.24	50.0
CDX85317	Canola	cytosol	48.62	49.38
Bra037506.1-P	Field mustard	cytosol	48.32	49.07
Bra020713.1-P	Field mustard	cytosol	17.74	48.74
AT5G48180.1	Thale cress	cytosol	47.71	47.85
CDX86322	Canola	cytosol	48.32	45.93
CDY30169	Canola	cytosol	43.73	44.27
CDY19142	Canola	cytosol, peroxisome, plastid	46.79	43.59
CDY52048	Canola	plastid	46.48	43.3
AT1G54040.2	Thale cress	cytosol	43.12	41.35
CDY36630	Canola	cytosol	43.12	41.11
Bra039702.1-P	Field mustard	cytosol	33.03	41.06
CDY51408	Canola	cytosol	42.81	40.82
Bra037958.1-P	Field mustard	cytosol	32.72	40.68
CDX96969	Canola	peroxisome	42.2	40.23
CDX94790	Canola	cytosol	42.2	40.23
CDY49014	Canola	cytosol	41.9	39.94
CDY08215	Canola	cytosol	41.59	39.08
CDY64894	Canola	cytosol, mitochondrion	29.97	37.98
CDY30681	Canola	cytosol	40.37	37.93
CDY56199	Canola	cytosol	44.34	35.11
CDX92073	Canola	cytosol	48.32	33.47
CDY65743	Canola	cytosol, peroxisome, plastid	43.12	33.33
AT3G16400.1	Thale cress	cytosol	47.71	33.19
CDY03963	Canola	cytosol	46.79	32.76
AT2G33070.3	Thale cress	cytosol	47.09	32.56
CDY20194	Canola	cytosol	46.18	32.33
AT3G16390.2	Thale cress	cytosol	45.87	32.12
CDY03958	Canola	cytosol	45.57	31.97
CDY28366	Canola	cytosol	45.57	31.91
CDY56200	Canola	endoplasmic reticulum, extracellular, plasma membrane	44.65	31.53
CDY24063	Canola	cytosol, mitochondrion	25.08	28.87
Bra040923.1-P	Field mustard	cytosol	44.65	28.68
AT3G16410.1	Thale cress	cytosol	45.26	23.91
Bra018943.1-P	Field mustard	cytosol	14.68	23.88
Bra022157.1-P	Field mustard	cytosol	8.87	23.02
Bra018944.1-P	Field mustard	cytosol	47.71	19.7
CDY60589	Canola	cytosol	47.09	19.44
Bra021175.1-P	Field mustard	cytosol	14.98	18.92
HORVU5Hr1G025310.1	Barley	cytosol	24.77	16.84
HORVU6Hr1G093000.5	Barley	cytosol	22.32	13.67
HORVU5Hr1G117920.1	Barley	cytosol	21.41	13.38
Bra022159.1-P	Field mustard	cytosol	10.7	13.26
HORVU3Hr1G040720.1	Barley	mitochondrion, nucleus, peroxisome, vacuole	24.46	12.92
HORVU2Hr1G083780.14	Barley	nucleus, plastid	24.16	11.84
HORVU5Hr1G117970.2	Barley	plastid	23.24	10.92
HORVU4Hr1G032550.32	Barley	mitochondrion	20.8	9.93
HORVU5Hr1G025430.25	Barley	mitochondrion	21.1	9.87
HORVU2Hr1G046680.19	Barley	cytosol	18.35	5.49

Protein Annotations

EMBL:AK374839	EnsemblPlants:HORVU5Hr1G051310.1	EnsemblPlantsGene:HORVU5Hr1G051310	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401
PFAM:PF01344	PFAM:PF13418	SEG:seg	SUPFAM:SSF117281	UniParc:UPI00000A1BA5	UniProt:F2EFB3
MapMan:35.1	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EFB3]

Coordinates

chrchr5H:+:400778175..400780034

Molecular Weight (calculated)

34023.5 Da

IEP (calculated)

4.555

GRAVY (calculated)

-0.152

Length

327 amino acids

Sequence
(BLAST)

001: MAGTGSTWIL LEQKGAGPGA RSSHAITLVG GTAYSFGGEF TPRLPVDNTM YAFDLKAQSW SALDAAGEVP PPRVGVTMAS VGGTVFVFGG RDKDHTELNE
101: LYSFDTATST WTLLSSGDDG PPHRSYHSMV ADGEGSRVYV FGGCGNAGRL NDLWAYDVAA GRWEELPSPG AACPPRGGPG LAFADGKVWV VYGFSGDAEL
201: DDVHSYDPAT GEWAVVDTTG DKPTPRSVLC AAGVGKHVVV FGGEVDPSDL GHLGAGKFSA EAFVLDTDTG AWARLDDAGS GHHPGPRGWC AFSAGALDGR
301: RGMLVYGGNS PTNDRLGDMF LFTPLLA

Best Arabidopsis Sequence Match ( AT3G07720.1 )
(BLAST)

001: MAATPMEGKW VQLKQKGTGP GARSSHAIAL VGNKMYAFGG EFQPRVPVDN QLYVFDLETQ TWSIQEASGD APPPRVGVAM AAVGPIIYFF GGRDSTHQEL
101: NELYCFNTLT NQWKLLSSGE TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG LEVVQGKIWV VYGFAGEEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK
301: QGLLVYGGNS PSNDRLDDIF FFTPNTLLK

Arabidopsis Description

AT3g07720/F17A17_6 [Source:UniProtKB/TrEMBL;Acc:Q9S7W4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.