Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G223200.1 | Wheat | cytosol | 94.33 | 94.85 |
| TraesCS2B01G248800.1 | Wheat | cytosol | 94.14 | 94.66 |
| TraesCS2D01G229200.1 | Wheat | cytosol | 93.78 | 94.3 |
| KXG36320 | Sorghum | cytosol, nucleus, peroxisome | 71.18 | 71.97 |
| Zm00001d021624_P002 | Maize | mitochondrion | 69.53 | 70.11 |
| GSMUA_Achr6P29460_001 | Banana | cytosol | 55.99 | 57.36 |
| AT4G04670.1 | Thale cress | cytosol | 49.31 | 54.17 |
| VIT_10s0116g01770.t01 | Wine grape | cytosol | 51.42 | 53.93 |
| Bra000803.1-P | Field mustard | cytosol | 48.22 | 53.39 |
| Solyc05g055610.2.1 | Tomato | cytosol | 48.03 | 52.82 |
| CDY21313 | Canola | cytosol | 47.48 | 52.32 |
| CDX90875 | Canola | cytosol | 48.22 | 52.23 |
| PGSC0003DMT400060067 | Potato | cytosol | 35.5 | 51.94 |
| KRH51088 | Soybean | cytosol | 50.41 | 51.26 |
| KRH02069 | Soybean | cytosol | 25.43 | 45.13 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 5.49 | 18.35 |
| HORVU5Hr1G117920.1 | Barley | cytosol | 8.69 | 18.16 |
| HORVU5Hr1G025310.1 | Barley | cytosol | 7.87 | 17.88 |
| HORVU5Hr1G117970.2 | Barley | plastid | 11.34 | 17.82 |
| HORVU6Hr1G093000.5 | Barley | cytosol | 8.6 | 17.6 |
| HORVU3Hr1G040720.1 | Barley | mitochondrion, nucleus, peroxisome, vacuole | 8.6 | 15.19 |
| HORVU5Hr1G025430.25 | Barley | mitochondrion | 9.42 | 14.74 |
| HORVU4Hr1G032550.32 | Barley | mitochondrion | 9.06 | 14.45 |
| HORVU2Hr1G083780.14 | Barley | nucleus, plastid | 8.6 | 14.09 |
Protein Annotations
| Gene3D:2.120.10.80 | Gene3D:3.30.1960.10 | Gene3D:3.40.50.150 | MapMan:35.1 | UniProt:A0A287HX19 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008033 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016740 | EnsemblPlantsGene:HORVU2Hr1G046680 | EnsemblPlants:HORVU2Hr1G046680.19 | InterPro:IPR015915 |
| InterPro:IPR030382 | InterPro:IPR036602 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | InterPro:MeTrfase_TRM5/TYW2 | PFAM:PF02475 |
| PFAM:PF02676 | PFAM:PF13415 | PFAM:PF13418 | PFscan:PS51684 | PANTHER:PTHR23245 | PANTHER:PTHR23245:SF25 |
| InterPro:SAM-dependent_MTases | SMART:SM00612 | SUPFAM:SSF111278 | SUPFAM:SSF117281 | SUPFAM:SSF53335 | UniParc:UPI000B4830AD |
| SEG:seg | InterPro:tRNA_yW-synthesising | InterPro:tRNA_yW-synthesising-like_sf | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:252266492..252287970
Molecular Weight (calculated)
119905.0 Da
IEP (calculated)
6.909
GRAVY (calculated)
-0.148
Length
1093 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDFARRKAAA LAALSSPAPD KSPKGGVDAP IAPLLDALNS HADLFTTSSC SGRISVLAQP SPQSQAADPK PKKKARGGGW LYISHDPADP DAVVELLFGG
0101: TGCGERGGGD ELVFRFEPMI VAVECRDAAA ATALVAAAIG AGFRESGITG LQRRAMVAIR CSIRMEVPLG LTDELVVSPE YIRYLVRIAN CKMEANKKRM
0201: DCFLDVLQSK AWAFCNGLPG ISGLQVHTKK DDHCLASEVQ ASLSWSVQTH DELLVTEKRH DIYSCDVGNK GDCEIGENSI EGSYYENRDA VRNNIAKHGF
0301: GNAERLVHEG ILSASSGNRS SHLSISELKI SGEPVDKLFL WGQSACVLTV GGEQQVLTFG GFGGQGRHAR RNYSLLLDPT SGLLKEINVK DSPSPRMGHT
0401: TTAVDNHIYA VGGRAGPSEI LDDVWVLQST ENRWSRVECS GDIFHGRHRH AAAATALKIY VFGGLSNEGL YSCLNILDTE SMRWNVISAA GEWPCARHSH
0501: SLVSYGSTLF MFGGHDGQRA LNDFYSFDTT TLSWKKEITS GRTPSPRFSH CMFIYKHYIG ILGGCPIREN NQEIAFLDLK HRVWLHVSIP ALGQCLCVRS
0601: SSVVTGDDLV VIGGGASCYA FGTKFCQPVK IDLHLLESVF ELAYKKNDNG IQSCDATYTM DLQEHEQNGT FISHNVESMV DAATNGIAGS DPLVFQLEKK
0701: YAKLAKDILK KFGWLDLARK VRVSQDNVLV IFPVSKNIHT LVTDQHSKLL DDDSCISKGL FDCPEKKLVG ASIALHEALE LLSSFHGSFL KDELALSRKA
0801: YKSPQIIMRE LISSLLERKG MPSRLLEQLP TRWETLGDIT VLPKTCFKDL LWESVREELW QLVAKSLGAQ RLARQGKIIP NGTRDSTLEL LVGDNGWVTH
0901: YENGITYSLD ATKCMFSSGN RSEKLRMGQL DCRDEVVVDL FSGIGYFVLP FLVKANAKLV YACEWNPHAL EALQRNVMDN HVADRCVILE GDNRLIAPKG
1001: VADRVCLGLL PSSECSWATA VRALRVDGGV LHIHGNVNNS DEARWLDNVV ESISSIATAH GLSWKVSLEH VERVKWYGPH IRHLVADVRC GSN
0101: TGCGERGGGD ELVFRFEPMI VAVECRDAAA ATALVAAAIG AGFRESGITG LQRRAMVAIR CSIRMEVPLG LTDELVVSPE YIRYLVRIAN CKMEANKKRM
0201: DCFLDVLQSK AWAFCNGLPG ISGLQVHTKK DDHCLASEVQ ASLSWSVQTH DELLVTEKRH DIYSCDVGNK GDCEIGENSI EGSYYENRDA VRNNIAKHGF
0301: GNAERLVHEG ILSASSGNRS SHLSISELKI SGEPVDKLFL WGQSACVLTV GGEQQVLTFG GFGGQGRHAR RNYSLLLDPT SGLLKEINVK DSPSPRMGHT
0401: TTAVDNHIYA VGGRAGPSEI LDDVWVLQST ENRWSRVECS GDIFHGRHRH AAAATALKIY VFGGLSNEGL YSCLNILDTE SMRWNVISAA GEWPCARHSH
0501: SLVSYGSTLF MFGGHDGQRA LNDFYSFDTT TLSWKKEITS GRTPSPRFSH CMFIYKHYIG ILGGCPIREN NQEIAFLDLK HRVWLHVSIP ALGQCLCVRS
0601: SSVVTGDDLV VIGGGASCYA FGTKFCQPVK IDLHLLESVF ELAYKKNDNG IQSCDATYTM DLQEHEQNGT FISHNVESMV DAATNGIAGS DPLVFQLEKK
0701: YAKLAKDILK KFGWLDLARK VRVSQDNVLV IFPVSKNIHT LVTDQHSKLL DDDSCISKGL FDCPEKKLVG ASIALHEALE LLSSFHGSFL KDELALSRKA
0801: YKSPQIIMRE LISSLLERKG MPSRLLEQLP TRWETLGDIT VLPKTCFKDL LWESVREELW QLVAKSLGAQ RLARQGKIIP NGTRDSTLEL LVGDNGWVTH
0901: YENGITYSLD ATKCMFSSGN RSEKLRMGQL DCRDEVVVDL FSGIGYFVLP FLVKANAKLV YACEWNPHAL EALQRNVMDN HVADRCVILE GDNRLIAPKG
1001: VADRVCLGLL PSSECSWATA VRALRVDGGV LHIHGNVNNS DEARWLDNVV ESISSIATAH GLSWKVSLEH VERVKWYGPH IRHLVADVRC GSN
001: MDFEKRKAAT LASIRSSVTD KSPKGFLDEP IIPLLETINH HPSYFTTSSC SGRISILSQP KPKSNDSTKK KARGGSWLYI THDPADSDLV ISLLFPSKSN
101: QIDPIDQPSE LVFRFEPLII AVECKDLGSA QFLVALAISA GFRESGITSC GDGKRVIIAI RCSIRMEVPI GDTEKLMVSP EYVKFLVDIA NEKMDANRKR
201: TDGFSVALAS NGFKNPDEND VDEDDNYENL AANHDSSINN GNLYPGVQKE LIPLEKLSIV GEPVEKLHLW GHSACTIDES DRKEVIVFGG FGGFGRHARR
301: NESLLLNPSC GTLKLIAVNE SPSARLGHTA SMVGDFMFVI GGRADPLNIL NDVWRLDIST GEWSSQRCVG SEFPPRHRHA AASVGTKVYI FGGLYNDKIV
401: SSMHILDTKD LQWKEVEQQG QWPCARHSHA MVAYGSQSFM FGGYNGENVL NDLYSFDVQS CSWKLEVISG KWPHARFSHS MFVYKHTIGI IGGCPVSQNC
501: QELTLLDLKH RLWRSVRLEF MNKELFVRST ASILGDDLIV IGGGAACYAF GTKFSEPVKI NLVQSVTMSE NHLPPQPEDV SLESNKNNAD LKTETSLSQP
601: WVIQLERKYA KFGKDILKSF GWLDLERKVY SNEKGLCICF PVTENFSELF HEKQLLGKDF ERSEENNLTK GLSLKDISCS AALNLLKEHG AKKLINVAFE
701: AKKVAKSPLQ RMREDITSIL KQKGLPEELL DELPQKWERL GDIVVVPATS FKDPTWSSIN DEVWCAVSKS LSANRLARQG RVEPNGTRDS TLEILVGDNG
801: WVNHRENGIL YSFDATKCMF SWGNLSEKLR MGNMACENEV VVDLFAGIGY FVLPFLVRAK AKLVYACEWN PHAIEALRRN VEANSVSERC IILEGDNRIT
901: APKGVADRVN LGLIPSSEGS WVTAIQALRP EGGILHVHGN VKDSDESSWG EHVTKTLSDI ARAEGRSWEV TVEHIEKVKW YAPRIRHLVA DVRCR
101: QIDPIDQPSE LVFRFEPLII AVECKDLGSA QFLVALAISA GFRESGITSC GDGKRVIIAI RCSIRMEVPI GDTEKLMVSP EYVKFLVDIA NEKMDANRKR
201: TDGFSVALAS NGFKNPDEND VDEDDNYENL AANHDSSINN GNLYPGVQKE LIPLEKLSIV GEPVEKLHLW GHSACTIDES DRKEVIVFGG FGGFGRHARR
301: NESLLLNPSC GTLKLIAVNE SPSARLGHTA SMVGDFMFVI GGRADPLNIL NDVWRLDIST GEWSSQRCVG SEFPPRHRHA AASVGTKVYI FGGLYNDKIV
401: SSMHILDTKD LQWKEVEQQG QWPCARHSHA MVAYGSQSFM FGGYNGENVL NDLYSFDVQS CSWKLEVISG KWPHARFSHS MFVYKHTIGI IGGCPVSQNC
501: QELTLLDLKH RLWRSVRLEF MNKELFVRST ASILGDDLIV IGGGAACYAF GTKFSEPVKI NLVQSVTMSE NHLPPQPEDV SLESNKNNAD LKTETSLSQP
601: WVIQLERKYA KFGKDILKSF GWLDLERKVY SNEKGLCICF PVTENFSELF HEKQLLGKDF ERSEENNLTK GLSLKDISCS AALNLLKEHG AKKLINVAFE
701: AKKVAKSPLQ RMREDITSIL KQKGLPEELL DELPQKWERL GDIVVVPATS FKDPTWSSIN DEVWCAVSKS LSANRLARQG RVEPNGTRDS TLEILVGDNG
801: WVNHRENGIL YSFDATKCMF SWGNLSEKLR MGNMACENEV VVDLFAGIGY FVLPFLVRAK AKLVYACEWN PHAIEALRRN VEANSVSERC IILEGDNRIT
901: APKGVADRVN LGLIPSSEGS WVTAIQALRP EGGILHVHGN VKDSDESSWG EHVTKTLSDI ARAEGRSWEV TVEHIEKVKW YAPRIRHLVA DVRCR
Arabidopsis Description
tRNA wybutosine-synthesizing protein 2/3/4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4K1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.