Factsheet for Bra000803.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90875	Canola	cytosol	99.09	96.93
CDY21313	Canola	cytosol	96.15	95.67
AT4G04670.1	Thale cress	cytosol	83.49	82.81
VIT_10s0116g01770.t01	Wine grape	cytosol	62.92	59.6
Solyc05g055610.2.1	Tomato	cytosol	58.16	57.75
KRH51088	Soybean	cytosol	62.01	56.93
PGSC0003DMT400060067	Potato	cytosol	42.96	56.76
KRH02069	Soybean	cytosol	32.22	51.62
GSMUA_Achr6P29460_001	Banana	cytosol	53.39	49.39
TraesCS2A01G223200.1	Wheat	cytosol	53.5	48.57
TraesCS2B01G248800.1	Wheat	cytosol	53.39	48.48
TraesCS2D01G229200.1	Wheat	cytosol	53.19	48.3
HORVU2Hr1G046680.19	Barley	cytosol	53.39	48.22
KXG36320	Sorghum	cytosol, nucleus, peroxisome	52.08	47.55
Zm00001d021624_P002	Maize	mitochondrion	51.27	46.68
Bra037506.1-P	Field mustard	cytosol	6.48	19.88
Bra005274.1-P	Field mustard	cytosol	7.5	19.84
Bra040844.1-P	Field mustard	cytosol	2.63	19.55
Bra025672.1-P	Field mustard	nucleus	9.93	18.96
Bra016550.1-P	Field mustard	mitochondrion	9.93	18.7
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	6.89	18.63
Bra008135.1-P	Field mustard	mitochondrion, nucleus	9.22	18.61
Bra020713.1-P	Field mustard	cytosol	2.23	18.49
Bra040219.1-P	Field mustard	cytosol	12.06	17.89
Bra039439.1-P	Field mustard	cytosol	12.06	17.84
Bra005279.1-P	Field mustard	cytosol	5.88	17.68
Bra039702.1-P	Field mustard	cytosol	4.66	17.49
Bra001147.1-P	Field mustard	cytosol	11.65	16.84
Bra037958.1-P	Field mustard	cytosol	4.46	16.73
Bra029671.1-P	Field mustard	cytosol	2.03	16.53
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	10.84	16.04
Bra005805.1-P	Field mustard	cytosol	7.9	15.51
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	10.33	15.29
Bra005272.1-P	Field mustard	cytosol	7.9	13.54
Bra002170.1-P	Field mustard	mitochondrion	9.32	13.14
Bra040923.1-P	Field mustard	cytosol	6.48	12.57
Bra000617.1-P	Field mustard	endoplasmic reticulum	10.03	10.39
Bra021175.1-P	Field mustard	cytosol	2.63	10.04
Bra018943.1-P	Field mustard	cytosol	1.93	9.45
Bra018944.1-P	Field mustard	cytosol	7.29	9.09
Bra022159.1-P	Field mustard	cytosol	1.72	6.44
Bra022157.1-P	Field mustard	cytosol	0.81	6.35

Protein Annotations

Gene3D:2.120.10.80	Gene3D:3.30.1960.10	Gene3D:3.40.50.150	MapMan:35.1	EnsemblPlantsGene:Bra000803	EnsemblPlants:Bra000803.1
EnsemblPlants:Bra000803.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139
GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:IPR015915
InterPro:IPR030382	InterPro:IPR036602	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M4C9C4	InterPro:MeTrfase_TRM5/TYW2
PFAM:PF01344	PFAM:PF02475	PFAM:PF02676	PFAM:PF13418	PFAM:PF13964	PFscan:PS51684
PANTHER:PTHR23245	PANTHER:PTHR23245:SF25	InterPro:SAM-dependent_MTases	SUPFAM:SSF111278	SUPFAM:SSF117281	SUPFAM:SSF53335
UniParc:UPI00025404B0	SEG:seg	InterPro:tRNA_yW-synthesising	InterPro:tRNA_yW-synthesising-like_sf	:	:

Description

AT4G04670 (E=0.0) | Met-10+ like family protein / kelch repeat-containing protein

Coordinates

chrA03:+:13233552..13237914

Molecular Weight (calculated)

109830.0 Da

IEP (calculated)

7.059

GRAVY (calculated)

-0.204

Length

987 amino acids

Sequence
(BLAST)

001: MEFEKRKAAT LASIRSSVTD KSPKGFLDEP ILPLLETINH HPSYFTTSSC SGRISILSQP KPQSTTNPSS KKKARGGSWL YITHDPADPE SVLHLLFSPP
101: SEPLDQPSEL VFRFEPLIIA VECKDVRSAQ FLVATAISAG FRESGITCCG EGKRVIIAIR CSIRMEVPLG DTGKVMVSRE YVRFLVDVAN EKMVANRKRT
201: DGFGFALLSN GFKNPDDAND VDEEDNFENL AENHESSISN GDLLPGPHQD LMPLSTISIT GESVEKLHIW GHSACTINKT DRKEVIVFGG FGGFGRHARR
301: NESMLLDPSG GTLKLITVHE SPSPRLGHTA SMVGDYMFVI GGRADPLNIL NDVWMLDISK CEWSLQRCIG CEFPPRHRHA AAKIGSNVYI FGGLNQDKIL
401: SSLHILDTKN LQWKEIEQRG PWPCARHSHD MVAYESQLFM FGGYNGEKVL DDLYSFDVQS CSWKLEMVSG KWPQARFSHS MFVYKHVIGI IGGCPVSRNC
501: HDLVLLDLKH RLWRSVRLDF MNKELLVRST ASVIGDDLIV IGGGAACYAF GTKFSEPVKI NLLQSLTMSG NDVEASIQVK TEASLSQPCV IQLERKYAKL
601: GKDILKNFGW LDLERKVYSH EKGLYICFPV TEKFSALFHE KQLLDKDLGG SEDNHLTSQL TKGLSLKEIS SSVALNLLKE VGARKFTNVA VEAKKVAKSP
701: LQRMKEAVTS ILKQKGLPEE LLDELPQKWE RLGDIVVLPV TSFKDPAWSS ISEEVWSAVA ISLSANRLTR QGRVEANGTR DSTLEILVGD DGWVDHRENG
801: ILYSFNATKC MFSWGNLSEK LRMGNVACEN EVVVDLFAGI GYFTLPFLVR AKAKLVYACE WNPHAIEALR HNIEANFVSD RCIILEGDNR INAPKGVADR
901: VCLGLIPTSE GSWITAIQAL RPEGGILHVH GNVKDSDVSS WSEHVSKSLS DIARAEGRSW EVTVEHIEKV KWYAPRIRHL VADVRCR

Best Arabidopsis Sequence Match ( AT4G04670.1 )
(BLAST)

001: MDFEKRKAAT LASIRSSVTD KSPKGFLDEP IIPLLETINH HPSYFTTSSC SGRISILSQP KPKSNDSTKK KARGGSWLYI THDPADSDLV ISLLFPSKSN
101: QIDPIDQPSE LVFRFEPLII AVECKDLGSA QFLVALAISA GFRESGITSC GDGKRVIIAI RCSIRMEVPI GDTEKLMVSP EYVKFLVDIA NEKMDANRKR
201: TDGFSVALAS NGFKNPDEND VDEDDNYENL AANHDSSINN GNLYPGVQKE LIPLEKLSIV GEPVEKLHLW GHSACTIDES DRKEVIVFGG FGGFGRHARR
301: NESLLLNPSC GTLKLIAVNE SPSARLGHTA SMVGDFMFVI GGRADPLNIL NDVWRLDIST GEWSSQRCVG SEFPPRHRHA AASVGTKVYI FGGLYNDKIV
401: SSMHILDTKD LQWKEVEQQG QWPCARHSHA MVAYGSQSFM FGGYNGENVL NDLYSFDVQS CSWKLEVISG KWPHARFSHS MFVYKHTIGI IGGCPVSQNC
501: QELTLLDLKH RLWRSVRLEF MNKELFVRST ASILGDDLIV IGGGAACYAF GTKFSEPVKI NLVQSVTMSE NHLPPQPEDV SLESNKNNAD LKTETSLSQP
601: WVIQLERKYA KFGKDILKSF GWLDLERKVY SNEKGLCICF PVTENFSELF HEKQLLGKDF ERSEENNLTK GLSLKDISCS AALNLLKEHG AKKLINVAFE
701: AKKVAKSPLQ RMREDITSIL KQKGLPEELL DELPQKWERL GDIVVVPATS FKDPTWSSIN DEVWCAVSKS LSANRLARQG RVEPNGTRDS TLEILVGDNG
801: WVNHRENGIL YSFDATKCMF SWGNLSEKLR MGNMACENEV VVDLFAGIGY FVLPFLVRAK AKLVYACEWN PHAIEALRRN VEANSVSERC IILEGDNRIT
901: APKGVADRVN LGLIPSSEGS WVTAIQALRP EGGILHVHGN VKDSDESSWG EHVTKTLSDI ARAEGRSWEV TVEHIEKVKW YAPRIRHLVA DVRCR

Arabidopsis Description

tRNA wybutosine-synthesizing protein 2/3/4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4K1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.