Factsheet for Bra015931.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, plasma membrane

Predictor Summary:

nucleus 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, nucleus, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96521	Canola	mitochondrion	84.11	91.07
Bra008135.1-P	Field mustard	mitochondrion, nucleus	55.77	76.07
AT1G74150.1	Thale cress	cytosol, mitochondrion	64.17	75.22
Bra025672.1-P	Field mustard	nucleus	47.83	61.7
Bra016550.1-P	Field mustard	mitochondrion	45.43	57.82
GSMUA_Achr3P30430_001	Banana	cytosol	35.53	50.43
VIT_17s0000g05150.t01	Wine grape	cytosol	41.68	45.95
KRH63188	Soybean	cytosol	39.43	42.9
KRH54725	Soybean	cytosol	39.13	42.58
Solyc03g114960.2.1	Tomato	nucleus	34.48	42.44
Bra040844.1-P	Field mustard	cytosol	4.95	24.81
Bra037506.1-P	Field mustard	cytosol	10.94	22.67
Bra039702.1-P	Field mustard	cytosol	8.7	22.05
Bra037958.1-P	Field mustard	cytosol	8.4	21.29
Bra005805.1-P	Field mustard	cytosol	15.44	20.48
Bra029671.1-P	Field mustard	cytosol	3.6	19.83
Bra005274.1-P	Field mustard	cytosol	10.79	19.3
Bra020713.1-P	Field mustard	cytosol	3.3	18.49
Bra005279.1-P	Field mustard	cytosol	8.55	17.38
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	9.3	16.99
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	14.69	14.69
Bra040219.1-P	Field mustard	cytosol	14.39	14.44
Bra018943.1-P	Field mustard	cytosol	4.35	14.43
Bra039439.1-P	Field mustard	cytosol	14.39	14.39
Bra001147.1-P	Field mustard	cytosol	14.69	14.35
Bra040923.1-P	Field mustard	cytosol	10.94	14.34
Bra005272.1-P	Field mustard	cytosol	11.24	13.02
Bra002170.1-P	Field mustard	mitochondrion	12.44	11.86
Bra000803.1-P	Field mustard	cytosol	15.29	10.33
Bra018944.1-P	Field mustard	cytosol	11.84	9.97
Bra000617.1-P	Field mustard	endoplasmic reticulum	13.64	9.55
Bra022157.1-P	Field mustard	cytosol	1.5	7.94
Bra021175.1-P	Field mustard	cytosol	2.7	6.95
Bra022159.1-P	Field mustard	cytosol	2.7	6.82

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EnsemblPlantsGene:Bra015931	EnsemblPlants:Bra015931.1	EnsemblPlants:Bra015931.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Gal_Oxase/kelch_b-propeller
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M4DHF4	PFAM:PF01344	PFAM:PF13415
PFAM:PF13418	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401	SUPFAM:SSF50965	TMHMM:TMhelix	UniParc:UPI0002541E13
SEG:seg	:	:	:	:	:

Description

AT1G74150 (E=2e-230) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G18610.1); Has 8525 Blast hits to 4249 proteins in 295 species: Archae - 10; Bacteria - 313; Metazoa - 3989; Fungi - 859; Plants - 1220; Viruses - 19; Other Eukaryotes - 2115 (source: NCBI BLink).

Coordinates

chrA07:+:20169897..20175122

Molecular Weight (calculated)

72607.0 Da

IEP (calculated)

5.825

GRAVY (calculated)

-0.411

Length

667 amino acids

Sequence
(BLAST)

001: MVSFKDQSKL TLLLGAEGPL YAITLLDIFL YPKVTTYFAF IFRVPIMMGI LALGQDLVKV LEVRWDPVKL QSLRGRVSGG TRLLGKKMRW ERVRQQNQQV
101: GHGDSSSGPG KRWGHTCNAI KGGRFVYVFG GFGRDDCLTN QVHVFDAGTQ IWTKPVIRGV PPSPRDSHSC TTVGDHLFVF GGTDGKNHLN DLHVLDTSSH
201: TWKCVDVRGE GPEAREAHSA TLVGKRIFIF GGCGKASGSD DEVFYNDLYT LNTETLTWQR AVTAGNPPSA RDSHTCSTWK NKIIVVGGED LDDYYYSDVH
301: ILDTETFVWK QMKTSGQVLT PRAGHVTVAL ERNLFVFGGF TDSQNLYDDL YVLDVETGVW SKLVHAMEEG PSARFSAGAV SLGPYKAGSF FFVGGCNKNL
401: EPLDDIYYLH TDGGYNARFD QTPGRFSLRK QMKLKCQAQK LAVAGTSTNQ GRETLPMSIG SMYQGKTVFH ARVTENVPLG YSIETIIDGR VLRGFLFSNR
501: HSSAQTAGPS VSSGKRPAMT DLDCDHGAKS LRTLSEDAAG SSQQAGPVDP SDDANKKVAD SNDMDTSMIE KADANVNIVR QQEAETAAAA SDVKDQDPSQ
601: LNMGAVNSET SPVTLDQANV EPLRNETSTD FAAATEAGPG GDSSPQNQDA GTVAAEDEEA EQNPQQH

Best Arabidopsis Sequence Match ( AT1G74150.2 )
(BLAST)

001: MRWERVQQVG LGDSSSFGPG KRWGHTCNAI KGGRFLYVFG GFGRDNCLTN QVHVFDAETQ IWIRPEINGV PPCPRDSHSC TTVGDNLFVF GGTDGTKYLN
101: DVHILDTYSH TWIRPDIRGE GPRVREAHSA ALVDKRLFIF GGCGKSSDSD DEVFYNDLYI LNTETYMWKR AVTSGKPPSA RDSHTCSAWK NKIIVVGGED
201: LDDYYLSDVH ILDTDKFVWK ELKTSGQVLT PRAGHVTVAL ERNLFVFGGF TDSQNLYDDL YVLDLETGVW SKVVAMVEGP SARFSSAAVC LDPYKAGSFF
301: FVGGCNKNLE PLDDIYYLHT EGRYDVRFHQ NPGRSSLRKQ MKLKCQGQEL TVAKTNIDHG RENVPLNIGY IDQRKPMFQA RVTENAPLGY TIETIIDGKV
401: LRGVLFSNRH SSVRIADSSI SSRERPATSD GDCDHRAKIP RTFSKDPAGS SQQAGPTDPS DDTNKKVADS NDTDTPMIDT VDANVNMEGT HEAETAAVTI
501: DAKDQDASQL DKGIVNTDPL PVSHDQVNVI STDAAKADPG VDSSTRKQEE GTSAEEDANV GPQPQQH

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTV1]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.