Factsheet for Bra000617.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G50310.1	Thale cress	nucleus	64.74	92.64
KRH63715	Soybean	nucleus	53.2	76.82
KRH54239	Soybean	nucleus	52.57	75.91
VIT_17s0000g10130.t01	Wine grape	nucleus	53.93	75.37
PGSC0003DMT400039402	Potato	nucleus	52.89	74.56
Solyc03g111390.2.1	Tomato	nucleus	52.68	74.26
KXG26585	Sorghum	nucleus	48.48	70.21
TraesCS2B01G361300.1	Wheat	nucleus	48.69	70.2
Os04t0483600-01	Rice	nucleus	48.69	70.09
TraesCS2A01G321200.1	Wheat	nucleus	48.58	70.05
TraesCS2D01G342300.1	Wheat	nucleus	43.02	67.32
CDX83165	Canola	nucleus	69.15	66.43
HORVU2Hr1G083780.14	Barley	nucleus, plastid	46.07	65.82
Zm00001d003259_P006	Maize	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	47.74	64.08
GSMUA_Achr10P...	Banana	nucleus	31.37	60.4
Bra039702.1-P	Field mustard	cytosol	6.19	22.43
Bra029671.1-P	Field mustard	cytosol	2.73	21.49
Bra037506.1-P	Field mustard	cytosol	7.14	21.12
Bra040844.1-P	Field mustard	cytosol	2.94	21.05
Bra037958.1-P	Field mustard	cytosol	5.77	20.91
Bra005274.1-P	Field mustard	cytosol	7.56	19.3
Bra005279.1-P	Field mustard	cytosol	6.4	18.6
Bra016550.1-P	Field mustard	mitochondrion	10.18	18.51
Bra008135.1-P	Field mustard	mitochondrion, nucleus	9.44	18.4
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	6.82	17.81
Bra025672.1-P	Field mustard	nucleus	9.44	17.41
Bra020713.1-P	Field mustard	cytosol	2.1	16.81
Bra001147.1-P	Field mustard	cytosol	10.91	15.23
Bra040219.1-P	Field mustard	cytosol	10.6	15.19
Bra040923.1-P	Field mustard	cytosol	8.08	15.13
Bra005805.1-P	Field mustard	cytosol	7.97	15.11
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	10.39	14.84
Bra039439.1-P	Field mustard	cytosol	10.28	14.69
Bra002170.1-P	Field mustard	mitochondrion	10.7	14.57
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	9.55	13.64
Bra005272.1-P	Field mustard	cytosol	8.18	13.54
Bra018943.1-P	Field mustard	cytosol	2.73	12.94
Bra021175.1-P	Field mustard	cytosol	2.73	10.04
Bra000803.1-P	Field mustard	cytosol	10.39	10.03
Bra018944.1-P	Field mustard	cytosol	8.29	9.97
Bra022157.1-P	Field mustard	cytosol	1.26	9.52
Bra022159.1-P	Field mustard	cytosol	1.89	6.82

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.2	EnsemblPlantsGene:Bra000617	EnsemblPlants:Bra000617.1	EnsemblPlants:Bra000617.1-P	ncoils:Coil
InterPro:DUF4110	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0030246	GO:GO:0030247
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	UniProt:M4C8T9	PFAM:PF13415	PFAM:PF13418	PFAM:PF13422
PFAM:PF13947	PANTHER:PTHR33355	PANTHER:PTHR33355:SF3	SUPFAM:SSF117281	SignalP:SignalP-noTM	UniParc:UPI00025401FA
InterPro:WAK_GUB	SEG:seg	:	:	:	:

Description

AT5G50310 (E=2e-279) | kelch repeat-containing protein

Coordinates

chrA03:+:12077310..12084472

Molecular Weight (calculated)

107046.0 Da

IEP (calculated)

5.006

GRAVY (calculated)

-0.586

Length

953 amino acids

Sequence
(BLAST)

001: MKILILMLTV IVISEVCLVE ACRSYCGNIT VDYPFGIRNG CGHPGYRDLL FCMNDVLMFH IRSGSYRVLD IDYAYQSITL HDPHMSNCGT IVLGGKGNGF
101: EAEDWRAPYF NPTSDNVFML IGCSPKSPIF QGFPEKKLPC HNISGMSCEE YMSCPAWDMV GYRQPGLSSG SGPPMCCAIG FESVKAINLS KLECEGYSSA
201: YNLAPLKLRG PSDWAYGIRV KYELQGSDAF CRACVATSGT CGYESADGGG LRHVCICDHH NSTTNCDSVV APTGASSSVR PKTIGSSIPA NKMGKKTKKA
301: GKGKEKTERK TAKAEEKKAR REGKKLSPED DIDAILLSIQ KEEAKKKEVL IEENVPAPSP RSNCSLTINP LKETELILYG GEFYNGQKTY VYGDLYRYDV
401: DKQEWKLVSS PNSPPPRSSH QAVAWKNYLY IFGGEFTSPN QERFHHYKDF WMLDVKTNQW EQLNLKGCPS PRSGHRMVLY KHKIIIFGGF YDTLREVRYY
501: NDLYVFDLDQ YKWQEIKPKP GAMWPTARSG FQFFVYQDEI FLYGGYSKEV SSEKSSEKGV VHADLWSLDP RTWEWNKVKK IGMPPSSRAG FSVCVHKKRA
601: LLFGGVVDME MEGDVMMSLF LNELYGFQLD NRRWYPIELR KEKSSKDKAK KNLEAKSMAS NDDDDDDDEM DSAEGESPSA MGDVAGSSDG ISERMAACLT
701: VEGSTSKALK GRLDPQVSVS EEVVKPCGRI NSCMVVGKDT LYIYGGMMEI KDKEITLDDL YSLNLSKLDE WKCIIPATET EWVEVSEDEE GDEDEDEDDS
801: EDEGDSEESD DEDDDEEVEG MDVDGLVKVG EVVAMIKGEG KALRRKEKRA RIEQIRANLG LSDSQRTPVP GETLKDFYKR TNMYWQMAAY EHTQHTGKEL
901: RKDGFDLAET RYLELKPILD ELAILEAEQK AEEAERPEAS GTSRKGGIAK KKR

Best Arabidopsis Sequence Match ( AT5G50310.1 )
(BLAST)

001: MGKKTKKPGK GKEKTERKTA KADEKKARRE GKKLSPEDDI DAILLNIQKE EAKKKEVHVE ENVAAPSPRS NCSLTINPLK ETELILYGGE FYNGQKTYVY
101: GDLYRYDVEK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGIVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKT LEAKPVASNN DDEMDSTEED ESLAMIEQTD GVGSSDGISE
401: RMATNLTVDG NRSDKSKALQ GAKTRLDPQV SVSEEVVKPC GRINSCMVVG KDTLYIYGGM MEIKDKEVTL DDLYSLNLSK LDEWKCIIPT TETEWVEVSD
501: DEEGDEDDDE DDSEDEGNSE ESDDEDDDEE VEAMDVDGSV KVGVVVAMIK GQGKSLRRKE KRARIEQIRA NLGLSDSQRT PVPGETLKDF YKRTNMYWQM
601: AAYEHTQHTG KELRKDGFDL AETRYLELKP ILDELAILEA EQKAEEAEGP EASSSSRKGG IAKKKR

Arabidopsis Description

AT5g50310/MXI22_1 [Source:UniProtKB/TrEMBL;Acc:Q945N1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.