Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400039402 | Potato | nucleus | 97.34 | 97.34 |
| KRH63715 | Soybean | nucleus | 76.48 | 78.33 |
| VIT_17s0000g10130.t01 | Wine grape | nucleus | 78.11 | 77.42 |
| KRH54239 | Soybean | nucleus | 75.0 | 76.82 |
| AT5G50310.1 | Thale cress | nucleus | 75.15 | 76.28 |
| CDY34042 | Canola | nucleus | 74.7 | 76.17 |
| KXG26585 | Sorghum | nucleus | 69.38 | 71.28 |
| Os04t0483600-01 | Rice | nucleus | 68.93 | 70.39 |
| TraesCS2B01G361300.1 | Wheat | nucleus | 68.79 | 70.35 |
| TraesCS2A01G321200.1 | Wheat | nucleus | 68.64 | 70.2 |
| TraesCS2D01G342300.1 | Wheat | nucleus | 59.91 | 66.5 |
| HORVU2Hr1G083780.14 | Barley | nucleus, plastid | 64.64 | 65.52 |
| Zm00001d003259_P006 | Maize | endoplasmic reticulum, mitochondrion, nucleus, plasma membrane | 65.83 | 62.68 |
| GSMUA_Achr10P... | Banana | nucleus | 45.41 | 62.02 |
| Bra000617.1-P | Field mustard | endoplasmic reticulum | 74.26 | 52.68 |
| CDX83165 | Canola | nucleus | 74.56 | 50.81 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 11.54 | 23.93 |
| Solyc11g007320.1.1 | Tomato | cytosol | 13.31 | 17.96 |
| Solyc11g007960.1.1 | Tomato | cytosol | 12.28 | 16.87 |
| Solyc03g114960.2.1 | Tomato | nucleus | 12.72 | 15.87 |
| Solyc01g067480.2.1 | Tomato | mitochondrion | 15.24 | 15.68 |
| Solyc01g099350.2.1 | Tomato | extracellular | 15.38 | 15.55 |
| Solyc01g100600.2.1 | Tomato | cytosol | 8.58 | 11.62 |
| Solyc05g055610.2.1 | Tomato | cytosol | 14.64 | 9.96 |
Protein Annotations
| EnsemblPlants:Solyc03g111390.2.1 | EnsemblPlantsGene:Solyc03g111390.2 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4110 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | ncoils:Coil | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF410 |
| PFAM:PF13415 | PFAM:PF13418 | PFAM:PF13422 | PFAM:PF13854 | SEG:seg | SUPFAM:SSF117281 |
| UniParc:UPI0002768EFE | UniProt:K4BK02 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3:+:61976257..61986228
Molecular Weight (calculated)
77501.5 Da
IEP (calculated)
4.892
GRAVY (calculated)
-0.917
Length
676 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKTKKPGK GKEKTEKKTA KAEEKRARRE SKKLSPEDDI DAILLNIQKE EAKKKEIHVE ENVPAPSPRS NCSLSINPLK ETELVLYGGE FYNGSKTFVY
101: GDLYRYDVEK QEWKLISSPN SPPPRSAHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWA LDLKTNQWEQ LNYKGCPSPR SGHRMILYKH KIIVFGGFYD
201: TLREVRYYND LHVFDLDQYK WQEIKPTPGC MWPSARSGFQ FFVYQDEIYL YGGYSKEVSS DKSGSEKGNV HSDMWSLDPK TWEWNKVKKS GMPPGARAGF
301: SMCIHKKRAI LFGGVVDMEM EGDVMMSLFL NELYGFQLDT HRWYPLELRK EKSIKPKQKQ VLDEQVDSMD LDSKISPMEV DADDEDEDLD YEEDTSTKSN
401: IKKMSLNMKR NVTIDDGYEA SRSEASSKSS AVQHSASADV VKPCGRINSC MAVAKDTLYI YGGMMEIRDQ ELTLDDLYVL NLSKLDEWKC IILASESEWV
501: EASDNEDDED EDEDDSDNEE CESGDDSDEE TDEEDDAEAN NGASTSLETG DAVAMIRGEG KTLRRKEKRA RIEQIRASLG LSDAQRTPVP GESLKDFYKR
601: TNMYWQMAAY EHTQHTGKEL RKDGFDLAEC RYKELKPILD ELAILEAEQK AEEAEGPEKS SAKKRGNKKT KNVAFK
101: GDLYRYDVEK QEWKLISSPN SPPPRSAHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWA LDLKTNQWEQ LNYKGCPSPR SGHRMILYKH KIIVFGGFYD
201: TLREVRYYND LHVFDLDQYK WQEIKPTPGC MWPSARSGFQ FFVYQDEIYL YGGYSKEVSS DKSGSEKGNV HSDMWSLDPK TWEWNKVKKS GMPPGARAGF
301: SMCIHKKRAI LFGGVVDMEM EGDVMMSLFL NELYGFQLDT HRWYPLELRK EKSIKPKQKQ VLDEQVDSMD LDSKISPMEV DADDEDEDLD YEEDTSTKSN
401: IKKMSLNMKR NVTIDDGYEA SRSEASSKSS AVQHSASADV VKPCGRINSC MAVAKDTLYI YGGMMEIRDQ ELTLDDLYVL NLSKLDEWKC IILASESEWV
501: EASDNEDDED EDEDDSDNEE CESGDDSDEE TDEEDDAEAN NGASTSLETG DAVAMIRGEG KTLRRKEKRA RIEQIRASLG LSDAQRTPVP GESLKDFYKR
601: TNMYWQMAAY EHTQHTGKEL RKDGFDLAEC RYKELKPILD ELAILEAEQK AEEAEGPEKS SAKKRGNKKT KNVAFK
001: MGKKTKKPGK GKEKTERKTA KADEKKARRE GKKLSPEDDI DAILLNIQKE EAKKKEVHVE ENVAAPSPRS NCSLTINPLK ETELILYGGE FYNGQKTYVY
101: GDLYRYDVEK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGIVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKT LEAKPVASNN DDEMDSTEED ESLAMIEQTD GVGSSDGISE
401: RMATNLTVDG NRSDKSKALQ GAKTRLDPQV SVSEEVVKPC GRINSCMVVG KDTLYIYGGM MEIKDKEVTL DDLYSLNLSK LDEWKCIIPT TETEWVEVSD
501: DEEGDEDDDE DDSEDEGNSE ESDDEDDDEE VEAMDVDGSV KVGVVVAMIK GQGKSLRRKE KRARIEQIRA NLGLSDSQRT PVPGETLKDF YKRTNMYWQM
601: AAYEHTQHTG KELRKDGFDL AETRYLELKP ILDELAILEA EQKAEEAEGP EASSSSRKGG IAKKKR
101: GDLYRYDVEK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGIVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKT LEAKPVASNN DDEMDSTEED ESLAMIEQTD GVGSSDGISE
401: RMATNLTVDG NRSDKSKALQ GAKTRLDPQV SVSEEVVKPC GRINSCMVVG KDTLYIYGGM MEIKDKEVTL DDLYSLNLSK LDEWKCIIPT TETEWVEVSD
501: DEEGDEDDDE DDSEDEGNSE ESDDEDDDEE VEAMDVDGSV KVGVVVAMIK GQGKSLRRKE KRARIEQIRA NLGLSDSQRT PVPGETLKDF YKRTNMYWQM
601: AAYEHTQHTG KELRKDGFDL AETRYLELKP ILDELAILEA EQKAEEAEGP EASSSSRKGG IAKKKR
Arabidopsis Description
AT5g50310/MXI22_1 [Source:UniProtKB/TrEMBL;Acc:Q945N1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.