Factsheet for Solyc11g007320.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050172	Potato	cytosol, mitochondrion, plastid	83.43	93.93
Bra040844.1-P	Field mustard	cytosol	19.96	75.19
CDX75043	Canola	cytosol	64.87	71.27
KRG92046	Soybean	cytosol	70.46	70.88
GSMUA_Achr8P07640_001	Banana	cytosol	68.66	68.94
CDX84132	Canola	cytosol	67.47	68.28
CDX75048	Canola	cytosol, plastid	67.27	67.67
Bra005274.1-P	Field mustard	cytosol	50.1	67.29
TraesCS4A01G356300.1	Wheat	mitochondrion	66.87	66.6
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	48.5	66.58
TraesCS5B01G515900.1	Wheat	mitochondrion	66.47	66.2
Os03t0835800-02	Rice	cytosol	65.67	65.67
Zm00001d034759_P001	Maize	cytosol	65.47	65.6
KXG37190	Sorghum	cytosol	65.27	65.14
TraesCS5D01G516000.1	Wheat	mitochondrion	65.27	63.87
HORVU5Hr1G117920.1	Barley	cytosol	66.47	63.67
Bra005279.1-P	Field mustard	cytosol	41.52	63.41
CDY67946	Canola	cytosol	44.31	63.25
AT2G36360.4	Thale cress	cytosol	65.07	62.93
VIT_13s0074g00620.t01	Wine grape	cytosol	68.66	61.87
Bra005272.1-P	Field mustard	cytosol	56.49	49.13
CDX75045	Canola	cytosol	66.47	39.69
Solyc05g024410.2.1	Tomato	cytosol, extracellular, plastid	15.37	23.62
Solyc11g007960.1.1	Tomato	cytosol	18.36	18.7
Solyc03g114960.2.1	Tomato	nucleus	19.36	17.9
Solyc01g099350.2.1	Tomato	extracellular	17.96	13.45
Solyc03g111390.2.1	Tomato	nucleus	17.96	13.31
Solyc01g067480.2.1	Tomato	mitochondrion	17.37	13.24
Solyc01g100600.2.1	Tomato	cytosol	10.98	11.02
Solyc05g055610.2.1	Tomato	cytosol	17.96	9.05

Protein Annotations

EnsemblPlants:Solyc11g007320.1.1	EnsemblPlantsGene:Solyc11g007320.1	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil	PANTHER:PTHR23244	PANTHER:PTHR23244:SF405
PFAM:PF13415	PFAM:PF13418	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI000276A280
UniProt:K4D4Z3	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr11:+:1694547..1705386

Molecular Weight (calculated)

55536.4 Da

IEP (calculated)

7.071

GRAVY (calculated)

-0.278

Length

501 amino acids

Sequence
(BLAST)

001: MHYWVRASPA DFAGAIPLPR SGHTAVNIGK SKVVVFGGLI DKKFLRDITV YDIENKLWFQ PECTGSGSDG QVGPSPRAFH VAVTIDCHMF IFGGRSGGRR
101: LGDFWVLDTD IWQWSELTSF GDLPSARDFA AASAIGKSKI VMFGGWDGKK WLSDVYILDT MTLEWRELAV LGTVPPPRCG HTATMVEKRL LVYGGRGGGG
201: PIMADLWALK GLIEEENESP GWTQLKIPGQ APTARCGHTV TSGGLHLLLF GGHGTGGWLS RYDVYYNDCV VLDRVSVHWK RLPTTNEPPV ARAYHSMTSV
301: GSRYLLFGGF DGKSTYGDLW WLVPEDDPIA KRVTASPPKA IHENQDASMT SMEKERQMQE DAVSELQKRI GISVSISDSN VKKIVDELED TELLELASKF
401: IGEGALSNKE AVQALRDHWS KSSPKSIQLK ELSPLLRDYK RSVTRIKEEN LGAFLQSMNA GSLGKETYRF HHIKNVSQLR MDDIPHLLAE YRQLLLDLGS
501: S

Best Arabidopsis Sequence Match ( AT2G36360.1 )
(BLAST)

001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSELR INDISKLLEE YKTLVI

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.