Factsheet for TraesCS5B01G515900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G356300.1	Wheat	mitochondrion	98.61	98.61
TraesCS5D01G516000.1	Wheat	mitochondrion	97.02	95.31
HORVU5Hr1G117920.1	Barley	cytosol	99.01	95.22
Os03t0835800-02	Rice	cytosol	85.69	86.03
KXG37190	Sorghum	cytosol	84.89	85.06
Zm00001d034759_P001	Maize	cytosol	84.29	84.8
GSMUA_Achr8P07640_001	Banana	cytosol	72.96	73.55
PGSC0003DMT400050172	Potato	cytosol, mitochondrion, plastid	59.44	67.19
Solyc11g007320.1.1	Tomato	cytosol	66.2	66.47
CDX75043	Canola	cytosol	60.24	66.45
KRG92046	Soybean	cytosol	65.21	65.86
Bra040844.1-P	Field mustard	cytosol	17.1	64.66
CDY67946	Canola	cytosol	44.73	64.1
CDX84132	Canola	cytosol	63.02	64.04
Bra005274.1-P	Field mustard	cytosol	47.12	63.54
CDX75048	Canola	cytosol, plastid	62.43	63.05
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	45.33	62.47
Bra005279.1-P	Field mustard	cytosol	38.77	59.45
AT2G36360.4	Thale cress	cytosol	60.64	58.88
VIT_13s0074g00620.t01	Wine grape	cytosol	62.62	56.65
Bra005272.1-P	Field mustard	cytosol	51.29	44.79
CDX75045	Canola	cytosol	61.03	36.59
TraesCS5B01G165000.1	Wheat	mitochondrion	13.52	20.8
TraesCS5B01G100100.1	Wheat	cytosol	19.09	18.15
TraesCS6B01G450700.1	Wheat	cytosol	18.29	17.36
TraesCS3B01G221000.2	Wheat	cytosol, mitochondrion, nucleus, vacuole	20.87	17.36
TraesCS5B01G100500.1	Wheat	mitochondrion	20.28	14.87
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	19.28	14.5
TraesCS2B01G361300.1	Wheat	nucleus	18.09	13.77
TraesCS2B01G248800.1	Wheat	cytosol	18.69	8.65

Protein Annotations

EnsemblPlants:TraesCS5B01G515900.1	EnsemblPlantsGene:TraesCS5B01G515900	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF405	PFAM:PF13415
PFAM:PF13418	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	MapMan:35.1	:

Description

No Description!

Coordinates

chr5B:+:680345728..680352875

Molecular Weight (calculated)

55479.9 Da

IEP (calculated)

5.339

GRAVY (calculated)

-0.308

Length

503 amino acids

Sequence
(BLAST)

001: MMQQLQPTRM HWARAVPSDF GGQAPAPRSG HTAVAIGGSK VVVFGGFADK RFLADIAVYD VENRLWYTPE CSGSGPDGQP GPSPRAFHVA VVIDCNMFIF
101: GGRSGGKRLG DFWMLDTDIW QWSEMTGFGD LPSPREFAAA SAIGNRKIVM YGGWDGKKWL SDVYVMDTMS LEWTELAVTG SAPPPRCGHS ATMIEKRLLI
201: FGGRGGTGPI MGDLWALKGI TEEDNETPGW TQLKLPGQSP SARCGHSVTS GGPYLLLFGG HGTGGWLSRY DVYYNECVIL DRVSVQWKRL PTSNEPPPPR
301: AYHSMTCIGP RFLLFGGFDG KNTFGDLWWL VPEDDPIAKR DLVPDVGSDS NHSTVTGDAQ QSALKESESQ SGESPMLELA KQLGIPLSVE PSASFVDEIN
401: DKELVELSSR LIGESLPTTD QLACIQALRD HWRSSPSSSI QLQELGPLLR DYQRLIIRRF VENPSPTFLE REDRRLFHLK NASQLRMDDI PILLGEYRTL
501: LST

Best Arabidopsis Sequence Match ( AT2G36360.3 )
(BLAST)

001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKLRVWSRQ ERGQDGFSIV DLQQKMGISV SSGLRLQIPE ESEDQEFVEL
401: GTRLIEGDVV DERASMIQMA AQALRQHWKQ STPRTLQLKE LGSLLRDYQR LVTRIFTTQS SLTSADFGLP GTKTFTFYHI KSSSELRIND ISKLLEEYKT
501: LVI

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.