Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005279.1-P | Field mustard | cytosol | 56.95 | 89.94 |
| CDX75048 | Canola | cytosol, plastid | 85.91 | 89.36 |
| CDX75043 | Canola | cytosol | 78.57 | 89.25 |
| CDX84132 | Canola | cytosol | 84.94 | 88.89 |
| Bra005274.1-P | Field mustard | cytosol | 63.13 | 87.67 |
| Bra040844.1-P | Field mustard | cytosol | 21.62 | 84.21 |
| Bra040845.1-P | Field mustard | cytosol, peroxisome, plastid | 58.49 | 83.01 |
| CDY67946 | Canola | cytosol | 55.6 | 82.05 |
| PGSC0003DMT400050172 | Potato | cytosol, mitochondrion, plastid | 58.11 | 67.64 |
| Bra005272.1-P | Field mustard | cytosol | 73.36 | 65.97 |
| KRG92046 | Soybean | cytosol | 62.74 | 65.26 |
| Solyc11g007320.1.1 | Tomato | cytosol | 62.93 | 65.07 |
| GSMUA_Achr8P07640_001 | Banana | cytosol | 60.81 | 63.13 |
| Zm00001d034759_P001 | Maize | cytosol | 59.65 | 61.8 |
| Os03t0835800-02 | Rice | cytosol | 59.65 | 61.68 |
| KXG37190 | Sorghum | cytosol | 59.46 | 61.35 |
| TraesCS5B01G515900.1 | Wheat | mitochondrion | 58.88 | 60.64 |
| TraesCS4A01G356300.1 | Wheat | mitochondrion | 58.88 | 60.64 |
| VIT_13s0074g00620.t01 | Wine grape | cytosol | 63.32 | 58.99 |
| HORVU5Hr1G117920.1 | Barley | cytosol | 59.27 | 58.7 |
| TraesCS5D01G516000.1 | Wheat | mitochondrion | 57.53 | 58.2 |
| CDX75045 | Canola | cytosol | 83.01 | 51.25 |
| AT3G07720.1 | Thale cress | cytosol | 13.9 | 21.88 |
| AT5G48180.1 | Thale cress | cytosol | 13.13 | 20.86 |
| AT1G54040.2 | Thale cress | cytosol | 13.51 | 20.53 |
| AT5G04420.3 | Thale cress | cytosol | 16.22 | 16.34 |
| AT1G18610.2 | Thale cress | cytosol | 16.6 | 15.47 |
| AT3G16400.1 | Thale cress | cytosol | 13.71 | 15.11 |
| AT1G74150.1 | Thale cress | cytosol, mitochondrion | 16.22 | 14.76 |
| AT2G33070.3 | Thale cress | cytosol | 13.32 | 14.59 |
| AT3G16390.2 | Thale cress | cytosol | 13.13 | 14.56 |
| AT5G50310.1 | Thale cress | nucleus | 17.57 | 13.66 |
| AT5G27630.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 17.57 | 13.62 |
| AT3G05420.2 | Thale cress | cytosol | 16.8 | 13.0 |
| AT5G18590.1 | Thale cress | mitochondrion | 16.41 | 12.01 |
| AT3G16410.1 | Thale cress | cytosol | 14.29 | 11.95 |
| AT4G04670.1 | Thale cress | cytosol | 16.22 | 8.44 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:818209 | ProteinID:AEC09243.2 | ArrayExpress:AT2G36360 | EnsemblPlantsGene:AT2G36360 |
| RefSeq:AT2G36360 | TAIR:AT2G36360 | RefSeq:AT2G36360-TAIR-G | EnsemblPlants:AT2G36360.4 | TAIR:AT2G36360.4 | Unigene:At.43496 |
| ncoils:Coil | UniProt:F4IMW3 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR015915 |
| InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | RefSeq:NP_001318362.1 | PFAM:PF13415 | PFAM:PF13418 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF401 | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI00084919C3 | SEG:seg | : |
Description
Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
Coordinates
chr2:-:15243744..15247627
Molecular Weight (calculated)
57574.9 Da
IEP (calculated)
6.088
GRAVY (calculated)
-0.195
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSEVI LHDFLLLLPL LNICNQLIYV
501: LHHRKDPCTD FTLNYVAV
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSEVI LHDFLLLLPL LNICNQLIYV
501: LHHRKDPCTD FTLNYVAV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.