CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034759_P001	Maize	cytosol	95.02	95.4
TraesCS5B01G515900.1	Wheat	mitochondrion	85.06	84.89
Os03t0835800-02	Rice	cytosol	84.46	84.63
TraesCS4A01G356300.1	Wheat	mitochondrion	84.66	84.49
TraesCS5D01G516000.1	Wheat	mitochondrion	83.47	81.84
HORVU5Hr1G117920.1	Barley	cytosol	85.06	81.64
GSMUA_Achr8P07640_001	Banana	cytosol	73.51	73.95
CDX75043	Canola	cytosol	60.96	67.11
Bra040844.1-P	Field mustard	cytosol	17.53	66.17
PGSC0003DMT400050172	Potato	cytosol, mitochondrion, plastid	58.57	66.07
KRG92046	Soybean	cytosol	65.14	65.66
Solyc11g007320.1.1	Tomato	cytosol	65.14	65.27
CDX84132	Canola	cytosol	63.55	64.44
CDY67946	Canola	cytosol	44.82	64.1
Bra005274.1-P	Field mustard	cytosol	47.41	63.81
CDX75048	Canola	cytosol, plastid	63.15	63.65
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	45.42	62.47
Bra005279.1-P	Field mustard	cytosol	39.24	60.06
AT2G36360.4	Thale cress	cytosol	61.35	59.46
VIT_13s0074g00620.t01	Wine grape	cytosol	64.14	57.91
Bra005272.1-P	Field mustard	cytosol	51.99	45.31
CDX75045	Canola	cytosol	61.75	36.95
KXG34722	Sorghum	cytosol	13.74	20.47
OQU85983	Sorghum	cytosol	18.73	17.97
EES00630	Sorghum	cytosol	21.51	17.62
EES16101	Sorghum	cytosol, nucleus, plastid	18.73	17.44
OQU83951	Sorghum	mitochondrion	19.92	14.56
EER90565	Sorghum	plastid	18.92	14.42
KXG23613	Sorghum	mitochondrion	19.52	14.16
KXG26585	Sorghum	nucleus	18.33	13.98
KXG36320	Sorghum	cytosol, nucleus, peroxisome	18.92	8.79

Protein Annotations

EnsemblPlants:KXG37190	EnsemblPlantsGene:SORBI_3001G023000	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401	PFAM:PF13415
PFAM:PF13418	ProteinID:KXG37190	ProteinID:KXG37190.1	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0001C80BDB
UniProt:A0A1B6QH18	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:1843896..1850570

Molecular Weight (calculated)

55423.8 Da

IEP (calculated)

6.026

GRAVY (calculated)

-0.329

Length

502 amino acids

Sequence
(BLAST)

001: MQQLQPKQMH WVRADSSDFG FGGDRPAPRS GHTAVSIGKS KVVVFGGFAD KRFLADVSVY DVENKLWYTP ECTGNGSDGQ AGPSPRAFHI AVVIDCNMFI
101: FGGRSGGKRL GDFWMLDTDL WQWSEMTGFG DLPSPREFAA ASAIGNRKIV MYGGWDGKKW LSDVYVMDTM SLEWTELAVT GSVPPPRCGH SATMIEKRLL
201: IFGGRGGAGP IMGDLWALKG ITEEDNETPG WTQLKLPGQS PSPRCGHSVT SGGPYLLLFG GHGTGGWLSR YDVYYNECII LDRVSVQWKR LPTSNEPPPP
301: RAYHSMTSIG SRFLLFGGFD GKNTFGDLWW LVPEDDPIAK RNIVLNIDSN SKPSTVTGDN QQSNLKESQA LENPVTELAK RMGIPLSEEV SASFIDEVND
401: KELAELSSRL AGQSLPATDQ VASIQVLRDH WKSSPASSLQ LQELGPLLRD YQRLILQRYS GNPLPAFHEM EALRFFHLKS ASQLRMDDIP VLLSEYGRLL
501: ST

Best Arabidopsis Sequence Match ( AT2G36360.1 )
(BLAST)

001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSELR INDISKLLEE YKTLVI

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.