Factsheet for GSMUA_Achr8P07640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034759_P001	Maize	cytosol	74.55	74.4
KXG37190	Sorghum	cytosol	73.95	73.51
Os03t0835800-02	Rice	cytosol	73.55	73.25
TraesCS5B01G515900.1	Wheat	mitochondrion	73.55	72.96
TraesCS4A01G356300.1	Wheat	mitochondrion	73.35	72.76
TraesCS5D01G516000.1	Wheat	mitochondrion	72.55	70.7
PGSC0003DMT400050172	Potato	cytosol, mitochondrion, plastid	62.53	70.11
HORVU5Hr1G117920.1	Barley	cytosol	73.35	69.98
CDX75043	Canola	cytosol	62.93	68.86
KRG92046	Soybean	cytosol	68.54	68.67
Solyc11g007320.1.1	Tomato	cytosol	68.94	68.66
Bra040844.1-P	Field mustard	cytosol	18.24	68.42
CDX84132	Canola	cytosol	65.93	66.46
Bra005274.1-P	Field mustard	cytosol	49.3	65.95
CDX75048	Canola	cytosol, plastid	65.33	65.46
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	47.7	65.21
CDY67946	Canola	cytosol	44.89	63.82
Bra005279.1-P	Field mustard	cytosol	40.08	60.98
AT2G36360.4	Thale cress	cytosol	63.13	60.81
VIT_13s0074g00620.t01	Wine grape	cytosol	65.93	59.17
Bra005272.1-P	Field mustard	cytosol	54.51	47.22
CDX75045	Canola	cytosol	63.73	37.9
GSMUA_Achr3P30430_001	Banana	cytosol	18.04	19.15
GSMUA_Achr10P...	Banana	cytosol	8.22	18.06
GSMUA_Achr9P23600_001	Banana	cytosol	19.44	17.26
GSMUA_Achr8P29940_001	Banana	cytosol	20.24	16.03
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	20.24	14.99
GSMUA_Achr6P20340_001	Banana	plastid	20.04	14.66
GSMUA_Achr3P23920_001	Banana	mitochondrion	19.84	13.92
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	19.24	13.48
GSMUA_Achr10P...	Banana	nucleus	10.42	10.51
GSMUA_Achr6P29460_001	Banana	cytosol	19.44	9.09

Protein Annotations

EnsemblPlants:GSMUA_Achr8P07640_001	EnsemblPlants:GSMUA_Achr8T07640_001	EnsemblPlantsGene:GSMUA_Achr8G07640_001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF405
PFAM:PF13415	PFAM:PF13418	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI000296C6B0
UniProt:M0TNG7	MapMan:35.1	:	:	:	:

Description

kelch motif family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G07640_001]

Coordinates

chr8:+:5094651..5106460

Molecular Weight (calculated)

55433.7 Da

IEP (calculated)

6.398

GRAVY (calculated)

-0.344

Length

499 amino acids

Sequence
(BLAST)

001: MHWVKADAFD FGGNPPLPRS GHTAVNVGKS KVVVFGGFAD KRFLDDIAVY DIENKLWFTP ECTGSGSDEQ VGPSPRAFHV SVAIDCNMFI FGGRSGGKRM
101: GDFWMLDTDI WQWSELTSYG DLPSPREFAA ASAIGNRKIV MYGGWDGKKW LSDVYILDTI SLEWTELSIT GSVPQPRCGH SATMVEKRLL IFGGRGGGGP
201: IMSDLWALKG LIDEENETPG WTQLKLPGQN PSPRCGHTVT SGGHYLLLFG GHGTGGWLSR YDIYHNDCIV LDRVSVQWKR LATSNDPPAA RAYHSMTSIG
301: SRYLLFGGFD GKTTFGDLWW LVPEDDPIAK RFPSIPSAPP ESQSVTVSDG LAESSLKENQ NEQSPLVELQ KRLGIMISSS NFQVNLVDEV DDKELFELSS
401: RLAGESLPTR DHLACIQALR DRWKKSSASS IQLQELGPLL RDYQRLIIHH LENLRSDGPS TISNLTGQKV HRYFHLKSAS QLRMDDIPKL LDEYKRLVS

Best Arabidopsis Sequence Match ( AT2G36360.3 )
(BLAST)

001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKLRVWSRQ ERGQDGFSIV DLQQKMGISV SSGLRLQIPE ESEDQEFVEL
401: GTRLIEGDVV DERASMIQMA AQALRQHWKQ STPRTLQLKE LGSLLRDYQR LVTRIFTTQS SLTSADFGLP GTKTFTFYHI KSSSELRIND ISKLLEEYKT
501: LVI

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.