Factsheet for Bra040844.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005279.1-P	Field mustard	cytosol	84.96	34.45
Bra005274.1-P	Field mustard	cytosol	87.97	31.37
CDX75043	Canola	cytosol	88.72	25.88
PGSC0003DMT400050172	Potato	cytosol, mitochondrion, plastid	73.68	22.02
AT2G36360.4	Thale cress	cytosol	84.21	21.62
Bra005272.1-P	Field mustard	cytosol	89.47	20.66
Solyc11g007320.1.1	Tomato	cytosol	75.19	19.96
KRG92046	Soybean	cytosol	71.43	19.08
GSMUA_Achr8P07640_001	Banana	cytosol	68.42	18.24
Zm00001d034759_P001	Maize	cytosol	66.92	17.8
Os03t0835800-02	Rice	cytosol	66.92	17.76
KXG37190	Sorghum	cytosol	66.17	17.53
TraesCS5B01G515900.1	Wheat	mitochondrion	64.66	17.1
TraesCS4A01G356300.1	Wheat	mitochondrion	64.66	17.1
VIT_13s0074g00620.t01	Wine grape	cytosol	71.43	17.09
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	45.86	16.71
HORVU5Hr1G117920.1	Barley	cytosol	64.66	16.44
TraesCS5D01G516000.1	Wheat	mitochondrion	59.4	15.43
Bra018943.1-P	Field mustard	cytosol	15.04	9.95
Bra037506.1-P	Field mustard	cytosol	20.3	8.39
Bra008135.1-P	Field mustard	mitochondrion, nucleus	24.06	6.54
Bra025672.1-P	Field mustard	nucleus	24.81	6.38
Bra016550.1-P	Field mustard	mitochondrion	23.31	5.92
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	24.81	4.95
Bra037958.1-P	Field mustard	cytosol	8.27	4.18
Bra039702.1-P	Field mustard	cytosol	8.27	4.18
Bra005805.1-P	Field mustard	cytosol	15.79	4.17
Bra040923.1-P	Field mustard	cytosol	15.79	4.13
Bra040219.1-P	Field mustard	cytosol	18.8	3.76
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	18.8	3.75
Bra001147.1-P	Field mustard	cytosol	18.8	3.66
Bra039439.1-P	Field mustard	cytosol	18.05	3.6
Bra002170.1-P	Field mustard	mitochondrion	18.05	3.43
Bra020713.1-P	Field mustard	cytosol	3.01	3.36
Bra029671.1-P	Field mustard	cytosol	3.01	3.31
Bra018944.1-P	Field mustard	cytosol	18.05	3.03
Bra000617.1-P	Field mustard	endoplasmic reticulum	21.05	2.94
Bra000803.1-P	Field mustard	cytosol	19.55	2.63
Bra022157.1-P	Field mustard	cytosol	1.5	1.59
Bra022159.1-P	Field mustard	cytosol	2.26	1.14
Bra021175.1-P	Field mustard	cytosol	1.5	0.77

Protein Annotations

EnsemblPlants:Bra040844.1	EnsemblPlants:Bra040844.1-P	EnsemblPlantsGene:Bra040844	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401
PFAM:PF01344	PFAM:PF13418	SUPFAM:SSF117281	UniParc:UPI000253E967	UniProt:M4FIB5	MapMan:35.1

Description

AT2G36360 (E=2e-057) | kelch repeat-containing protein

Coordinates

chrScaffold000277:+:32861..33627

Molecular Weight (calculated)

14222.1 Da

IEP (calculated)

6.501

GRAVY (calculated)

-0.014

Length

133 amino acids

Sequence
(BLAST)

001: MHNWVRASSS DLTGTPPQPR SGHTAVNVGK SMVVVFGGLV DKKFLNDIIV YDIENKLWFE PECTGSVSEG KVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTX XXSLSVCLFG EPTQDQYPPL PIV

Best Arabidopsis Sequence Match ( AT2G36360.1 )
(BLAST)

001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSELR INDISKLLEE YKTLVI

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.