Factsheet for Bra005274.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040844.1-P	Field mustard	cytosol	31.37	87.97
Bra005279.1-P	Field mustard	cytosol	76.68	87.2
CDX84132	Canola	cytosol	95.44	71.92
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	65.68	67.12
Bra005272.1-P	Field mustard	cytosol	97.59	63.19
AT2G36360.4	Thale cress	cytosol	87.67	63.13
PGSC0003DMT400050172	Potato	cytosol, mitochondrion, plastid	64.34	53.93
KRG92046	Soybean	cytosol	68.1	51.0
Solyc11g007320.1.1	Tomato	cytosol	67.29	50.1
GSMUA_Achr8P07640_001	Banana	cytosol	65.95	49.3
Zm00001d034759_P001	Maize	cytosol	63.81	47.6
KXG37190	Sorghum	cytosol	63.81	47.41
Os03t0835800-02	Rice	cytosol	63.54	47.31
TraesCS4A01G356300.1	Wheat	mitochondrion	63.54	47.12
TraesCS5B01G515900.1	Wheat	mitochondrion	63.54	47.12
HORVU5Hr1G117920.1	Barley	cytosol	63.81	45.51
TraesCS5D01G516000.1	Wheat	mitochondrion	61.39	44.73
VIT_13s0074g00620.t01	Wine grape	cytosol	66.22	44.42
Bra037506.1-P	Field mustard	cytosol	13.94	16.15
Bra039702.1-P	Field mustard	cytosol	10.72	15.21
Bra008135.1-P	Field mustard	mitochondrion, nucleus	19.57	14.93
Bra025672.1-P	Field mustard	nucleus	19.3	13.93
Bra037958.1-P	Field mustard	cytosol	9.65	13.69
Bra016550.1-P	Field mustard	mitochondrion	19.03	13.55
Bra005805.1-P	Field mustard	cytosol	16.35	12.13
Bra029671.1-P	Field mustard	cytosol	3.75	11.57
Bra022157.1-P	Field mustard	cytosol	3.75	11.11
Bra040923.1-P	Field mustard	cytosol	14.75	10.81
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	19.3	10.79
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	19.3	10.79
Bra040219.1-P	Field mustard	cytosol	18.77	10.53
Bra001147.1-P	Field mustard	cytosol	19.03	10.4
Bra039439.1-P	Field mustard	cytosol	18.5	10.34
Bra020713.1-P	Field mustard	cytosol	3.22	10.08
Bra018943.1-P	Field mustard	cytosol	5.36	9.95
Bra002170.1-P	Field mustard	mitochondrion	17.16	9.14
Bra000617.1-P	Field mustard	endoplasmic reticulum	19.3	7.56
Bra000803.1-P	Field mustard	cytosol	19.84	7.5
Bra018944.1-P	Field mustard	cytosol	14.48	6.82
Bra022159.1-P	Field mustard	cytosol	4.29	6.06
Bra021175.1-P	Field mustard	cytosol	3.22	4.63

Protein Annotations

EnsemblPlants:Bra005274.1	EnsemblPlants:Bra005274.1-P	EnsemblPlantsGene:Bra005274	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF417
PFAM:PF13415	PFAM:PF13418	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0002547C5F
UniProt:M4CM37	MapMan:35.1	:	:	:	:

Description

AT2G36360 (E=1e-121) | kelch repeat-containing protein

Coordinates

chrA05:+:4487556..4491454

Molecular Weight (calculated)

41357.4 Da

IEP (calculated)

4.886

GRAVY (calculated)

-0.274

Length

373 amino acids

Sequence
(BLAST)

001: MHNWVRASSS DFTGTPPQPR SGHTAVNVGK SMVVVFGGLV DKKFLNDIIV YDIENKLWFE PECTGSVSEG KVGPTPRAFH VAITVDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFS AAAAIGNQKI VLCGGWDGKK WLSDVYVMDT MSLEWMELTV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEVTAQW KRLPISNDEP PPPRAYHTMT SIGARHLLIG GFDGKSTFGD LWWLVPEDDP IAKRSSVPQL RNPPETKESE RDLDTQERGQ
301: EGFTIVDLQK KMGISVASGL LRRHIPEESE DQEFVELGTR LIEGDAVDNR ASMIQLRMDD IAELLEEYKT LVI

Best Arabidopsis Sequence Match ( AT2G36360.4 )
(BLAST)

001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSEVI LHDFLLLLPL LNICNQLIYV
501: LHHRKDPCTD FTLNYVAV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.