Factsheet for Bra005805.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11290	Canola	cytosol	100.0	100.0
AT5G04420.3	Thale cress	cytosol	88.27	86.38
VIT_13s0019g05290.t01	Wine grape	cytosol	64.81	64.17
PGSC0003DMT400070308	Potato	cytosol	46.12	63.56
Solyc11g007960.1.1	Tomato	cytosol	59.84	61.18
KRG92113	Soybean	cytosol	43.94	60.22
KRH34674	Soybean	cytosol	60.04	59.92
KRG92111	Soybean	cytosol	16.1	59.12
Os02t0822800-01	Rice	cytosol	50.5	48.94
TraesCS6B01G450700.1	Wheat	cytosol	50.7	48.11
HORVU6Hr1G093000.5	Barley	cytosol	50.7	47.75
TraesCS6D01G389800.2	Wheat	cytosol	50.5	47.48
GSMUA_Achr9P23600_001	Banana	cytosol	51.49	46.09
OQU85983	Sorghum	cytosol	47.91	46.08
TraesCS6A01G406400.1	Wheat	cytosol	51.09	44.62
Zm00001d051876_P002	Maize	nucleus	47.32	40.07
Bra040219.1-P	Field mustard	cytosol	42.94	32.48
Bra039439.1-P	Field mustard	cytosol	42.54	32.08
Bra001147.1-P	Field mustard	cytosol	42.74	31.48
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	41.35	31.18
Bra008135.1-P	Field mustard	mitochondrion, nucleus	19.68	20.25
Bra037506.1-P	Field mustard	cytosol	12.92	20.19
Bra002170.1-P	Field mustard	mitochondrion	27.63	19.86
Bra037958.1-P	Field mustard	cytosol	10.34	19.77
Bra039702.1-P	Field mustard	cytosol	10.34	19.77
Bra016550.1-P	Field mustard	mitochondrion	19.68	18.89
Bra025672.1-P	Field mustard	nucleus	19.09	18.57
Bra029671.1-P	Field mustard	cytosol	4.37	18.18
Bra020713.1-P	Field mustard	cytosol	4.17	17.65
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	12.33	16.99
Bra005274.1-P	Field mustard	cytosol	12.13	16.35
Bra040844.1-P	Field mustard	cytosol	4.17	15.79
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	20.48	15.44
Bra022157.1-P	Field mustard	cytosol	3.78	15.08
Bra005279.1-P	Field mustard	cytosol	9.74	14.94
Bra040923.1-P	Field mustard	cytosol	13.12	12.97
Bra018943.1-P	Field mustard	cytosol	4.77	11.94
Bra005272.1-P	Field mustard	cytosol	13.12	11.46
Bra021175.1-P	Field mustard	cytosol	4.97	9.65
Bra018944.1-P	Field mustard	cytosol	14.12	8.96
Bra000617.1-P	Field mustard	endoplasmic reticulum	15.11	7.97
Bra000803.1-P	Field mustard	cytosol	15.51	7.9
Bra022159.1-P	Field mustard	cytosol	3.78	7.2

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EnsemblPlantsGene:Bra005805	EnsemblPlants:Bra005805.1	EnsemblPlants:Bra005805.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	UniProt:M4CNL7	PFAM:PF01344	PFAM:PF13418	PANTHER:PTHR23244	PANTHER:PTHR23244:SF336
SUPFAM:SSF50965	SUPFAM:SSF90257	UniParc:UPI000253FBA1	SEG:seg	:	:

Description

AT5G04420 (E=2e-204) | kelch repeat-containing protein

Coordinates

chrA03:-:726395..728900

Molecular Weight (calculated)

55106.7 Da

IEP (calculated)

5.829

GRAVY (calculated)

-0.365

Length

503 amino acids

Sequence
(BLAST)

001: MEEIRKEIDV GDWHSNLPHD EWTPLTVPGS RASARYKHAA VAVDEKLYIV GGSRNGRYLS DVQVFDLRSL TWDSFKLITG DGDGSLGEAF PAISDHRMIK
101: WGNRLLLIGG YSKNQSDNMS VRFIDLETHL CGVVDASGNV PVSRGGHSIT LVGSRVFVFG GEDKKRRLLN DLHVLDLETM TWDVVETSQT RPVPRFDHTA
201: ATHSDRYLLI FGGCSHSIFF NDLHILDLQT MEWSQPHVQG DDVTPRAGHA GITIDENWFI VGGGDNSTGC LETLVLNMSK LVWSTSTHVG ARHPLASEGL
301: SVCSASVFGE NILVAFGGYN GKYNNDIFVM RLKPGEPSSH PKIFKSPAAA AAAASVTAAY AIAKSDSSDF PPPPANPTLN GTGNSFSGSN IRNTIDSIKE
401: EKRTLESSVA ETQVENSKLR EKIDEVNSTH AELSQELQSV QGQLISERSR CFKLEAQIAE LQKALESGQS IEAEVEMLRK QKLAADERED GTVKKQGWGW
501: GAR

Best Arabidopsis Sequence Match ( AT5G04420.2 )
(BLAST)

001: MEEIRKEIDV GDWHSNLAHD EWTPLPVSGS RASARYKHAA VVVDEKLYIV GGSRNGRYLS DVQVFDLRSL TWSSLKLKTE SSSADNIQED DGSSLREAFP
101: AISDHRMIKW GNKLLLIGGH SKKSSDNMLV RFIDLETHSC GVIDVFGNVP ASRGGHSITL VGSRVLVFGG EDKNRRLLND LHVLHLETMT WDVVETKQTR
201: PVPRFDHTAA THSDRYLLIF GGCSHSIFYS DLHILDLQTM EWSQPHVQGD VVTPRAGHAG ITIDENWYIV GGGDNSTGCL ETLVLNMSKL VWSTSTHVEA
301: RHPLASEGLS VCSASVFGEN ILVAFGGYNG KYNNDIFVMR LKPGESSHPK IFKSPAAAAA AASVTAAYAI AKSDKSDYPP PANPTLNGNG NSLPERDIRN
401: RIDTIKEEKR ALESSIAETQ VENAKLREKI DEVNSSHTEL SQELQSVEGQ LISERSRCFK LEAQIAELQK ALESGQSIEA EVEMLRRQRS ASDEEEDGTV
501: QRQGSAGVWG LFGR

Arabidopsis Description

AT5G04420 protein [Source:UniProtKB/TrEMBL;Acc:Q9LZ83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.