Factsheet for Bra039439.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27769	Canola	cytosol	99.55	99.7
CDY05166	Canola	cytosol, nucleus, plastid	98.5	98.65
AT3G05420.2	Thale cress	cytosol	91.45	91.18
Bra040219.1-P	Field mustard	cytosol	89.95	90.23
Bra001147.1-P	Field mustard	cytosol	88.76	86.68
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	77.96	77.96
VIT_14s0060g02410.t01	Wine grape	plastid	76.61	75.82
KRG96823	Soybean	cytosol, plastid	71.36	73.34
Solyc01g099350.2.1	Tomato	extracellular	73.31	73.09
KRH68531	Soybean	nucleus	71.66	72.64
PGSC0003DMT400063503	Potato	extracellular	36.28	72.24
KRG92884	Soybean	nucleus	71.21	72.08
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	67.32	66.62
Os03t0835600-01	Rice	plastid	64.17	65.34
EER90565	Sorghum	plastid	64.17	64.95
GSMUA_Achr6P20340_001	Banana	plastid	65.52	64.08
TraesCS4A01G356400.2	Wheat	plastid	63.87	63.68
TraesCS5D01G515900.2	Wheat	plastid	63.87	63.68
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	63.87	63.68
Zm00001d034758_P003	Maize	plastid	62.97	61.67
HORVU5Hr1G117970.2	Barley	plastid	63.42	60.78
Zm00001d046434_P003	Maize	plastid	50.82	55.66
HORVU5Hr1G025310.1	Barley	cytosol	38.83	53.85
Zm00001d012892_P002	Maize	plastid	62.07	52.87
TraesCS5D01G106400.1	Wheat	cytosol	41.68	52.85
TraesCS5A01G094000.1	Wheat	cytosol	41.38	52.37
TraesCS5B01G100100.1	Wheat	cytosol	41.23	51.98
Os12t0540800-01	Rice	extracellular	39.88	50.47
EES16101	Sorghum	cytosol, nucleus, plastid	38.83	48.05
Zm00001d041692_P001	Maize	nucleus	36.28	44.57
Bra005805.1-P	Field mustard	cytosol	32.08	42.54
Bra037506.1-P	Field mustard	cytosol	11.99	24.84
Bra020713.1-P	Field mustard	cytosol	4.2	23.53
Bra029671.1-P	Field mustard	cytosol	4.05	22.31
Bra002170.1-P	Field mustard	mitochondrion	22.94	21.86
Bra037958.1-P	Field mustard	cytosol	7.95	20.15
Bra039702.1-P	Field mustard	cytosol	7.65	19.39
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	10.19	18.63
Bra025672.1-P	Field mustard	nucleus	14.39	18.57
Bra005274.1-P	Field mustard	cytosol	10.34	18.5
Bra016550.1-P	Field mustard	mitochondrion	14.39	18.32
Bra008135.1-P	Field mustard	mitochondrion, nucleus	13.34	18.2
Bra040844.1-P	Field mustard	cytosol	3.6	18.05
Bra018943.1-P	Field mustard	cytosol	5.4	17.91
Bra005279.1-P	Field mustard	cytosol	8.4	17.07
Bra040923.1-P	Field mustard	cytosol	12.89	16.9
Bra021175.1-P	Field mustard	cytosol	5.7	14.67
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	14.39	14.39
Bra005272.1-P	Field mustard	cytosol	11.39	13.19
Bra022157.1-P	Field mustard	cytosol	2.4	12.7
Bra018944.1-P	Field mustard	cytosol	14.69	12.37
Bra000803.1-P	Field mustard	cytosol	17.84	12.06
Bra000617.1-P	Field mustard	endoplasmic reticulum	14.69	10.28
Bra022159.1-P	Field mustard	cytosol	3.9	9.85

Protein Annotations

Gene3D:1.20.80.10	Gene3D:2.120.10.80	MapMan:35.1	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	EnsemblPlantsGene:Bra039439
EnsemblPlants:Bra039439.1	EnsemblPlants:Bra039439.1-P	ncoils:Coil	InterPro:FERM/acyl-CoA-bd_prot_sf	GO:GO:0000062	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000582	InterPro:IPR014352	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	UniProt:M4FEB8	PFAM:PF00887	PFAM:PF01344	PFAM:PF13415	PFscan:PS51228
PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	SUPFAM:SSF117281	SUPFAM:SSF47027	UniParc:UPI00025473AC	SEG:seg

Description

AT3G05420 (E=2e-309) ACBP4 | ACBP4 (ACYL-COA BINDING PROTEIN 4); acyl-CoA binding

Coordinates

chrA05:-:23332403..23336965

Molecular Weight (calculated)

73190.6 Da

IEP (calculated)

5.004

GRAVY (calculated)

-0.500

Length

667 amino acids

Sequence
(BLAST)

001: MAMARATSGP AYPERFYAAA SYAGFGGSES SAKNVSSKFS NDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWRSWQG LGTMPSMEAM RLFVKILEED
101: DPTWYSRASK DIPDPVVDVQ INATKDEPVV ENGNSFSETK TISAENGGLA ETQDKDVVSE DPNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESEEISPTFL LSPCAGHSLI PWDNKLLSIG GHTKDHSESM QVKVFDTHTS TWSMLKTYGK PPVSRGGQSV
301: TVVGKTLVIF GGQDAKRSLL NDLHVLDLET MTWDEIDALG VSPSPRSDHA AAVHAERYLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GEVPTPRSGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLTWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEVNL LKPSHKSTLQ PKTLEDPLPV
501: SLSAVNNATT RDIESEVEVS QESRVREIVM DNVNPGSKVE GNNERIIETL KAEKEELELS LNKEKTQTLQ LRQELADGES RNADLYKELH SVRSQLATEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQSSG GVWGWLAGSP QEKDDSP

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.