Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5D01G106400.1 | Wheat | cytosol | 97.15 | 97.34 |
TraesCS5B01G100100.1 | Wheat | cytosol | 95.83 | 95.46 |
HORVU5Hr1G025310.1 | Barley | cytosol | 87.1 | 95.43 |
Os12t0540800-01 | Rice | extracellular | 74.19 | 74.19 |
EES16101 | Sorghum | cytosol, nucleus, plastid | 71.54 | 69.94 |
Zm00001d041692_P001 | Maize | nucleus | 65.28 | 63.35 |
TraesCS4A01G356400.2 | Wheat | plastid | 57.69 | 45.44 |
GSMUA_Achr2P02340_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 57.69 | 45.1 |
GSMUA_Achr6P20340_001 | Banana | plastid | 58.25 | 45.01 |
VIT_14s0060g02410.t01 | Wine grape | plastid | 55.03 | 43.03 |
Solyc01g099350.2.1 | Tomato | extracellular | 53.51 | 42.15 |
KRG96823 | Soybean | cytosol, plastid | 51.61 | 41.91 |
KRH68531 | Soybean | nucleus | 52.18 | 41.79 |
KRG92884 | Soybean | nucleus | 52.18 | 41.73 |
CDY05166 | Canola | cytosol, nucleus, plastid | 52.56 | 41.59 |
CDY27769 | Canola | cytosol | 52.37 | 41.44 |
CDX74147 | Canola | cytosol, nucleus, plastid | 52.37 | 41.44 |
Bra039439.1-P | Field mustard | cytosol | 52.37 | 41.38 |
Bra040219.1-P | Field mustard | cytosol | 51.99 | 41.2 |
CDY18777 | Canola | cytosol | 51.61 | 40.9 |
CDY18797 | Canola | cytosol | 51.61 | 40.84 |
Bra001147.1-P | Field mustard | cytosol | 52.56 | 40.56 |
CDY40708 | Canola | cytosol | 51.23 | 40.54 |
AT3G05420.2 | Thale cress | cytosol | 51.42 | 40.51 |
Bra020582.1-P | Field mustard | cytosol, nucleus, plastid | 50.47 | 39.88 |
CDY05568 | Canola | plastid | 50.28 | 39.73 |
AT5G27630.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 50.28 | 39.67 |
CDY25029 | Canola | cytosol, nucleus, plastid | 50.09 | 39.4 |
PGSC0003DMT400063503 | Potato | extracellular | 21.82 | 34.33 |
TraesCS6A01G406400.1 | Wheat | cytosol | 37.38 | 34.2 |
TraesCS5A01G168200.1 | Wheat | mitochondrion | 15.56 | 25.08 |
TraesCS4A01G167800.1 | Wheat | mitochondrion | 28.46 | 21.93 |
TraesCS5A01G094400.1 | Wheat | mitochondrion | 27.89 | 21.4 |
TraesCS4A01G356300.1 | Wheat | mitochondrion | 18.22 | 19.09 |
TraesCS3A01G192200.1 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 19.92 | 17.33 |
TraesCS2A01G321200.1 | Wheat | nucleus | 17.65 | 14.07 |
TraesCS2A01G223200.1 | Wheat | cytosol | 18.03 | 8.74 |
Protein Annotations
EnsemblPlants:TraesCS5A01G094000.1 | EnsemblPlantsGene:TraesCS5A01G094000 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | ncoils:Coil | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF398 |
PFAM:PF01344 | PFAM:PF13415 | SEG:seg | SUPFAM:SSF117281 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5A:-:130136947..130141128
Molecular Weight (calculated)
58004.1 Da
IEP (calculated)
5.420
GRAVY (calculated)
-0.565
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSIQEPLHF KPEEPKVVVA ENEKMVDVQD KEVTMEGLCS VAAYDQWTPL SVPGQRPKPR YKHGAAVVQE KMYVFGGNHN GRYLGDIQVL DFKSLSWSKL
101: EAKIQSESAE PVLVAPCAGH SLIPSGNKIL SVAGHTREHT ESLSVKEFDP QTSTWSILRT YGKSPSSRGG QSVTRVGDTL VVFGGEGGGR SLLNELHVLD
201: LETMTWDEFE STGTPPSPRS EHAAACYADR YLLIFGGGSH STCFSDLYLL DMQTMEWSRP KQHGIIPEPR AGHAGVTVGD NWVITGGGNS KKGVPETLVL
301: NMSTLVWSVV TSFEGRAPPT SEGSSLVLHT INGEDFLLSF GGYSGRYSNE VYALKTSLRP SVSSSRIDEV ETNGMTPLSA EVNSSRGPIF EIEELRDDKN
401: NKGVDISKTL VQAVKHEKSQ VEEKLEQEKL QSFHLKKELA DVENKNAELT KELQSVRDQL SDEAARASKL EDGVSEIQQR LQKMETLEKE FELLRSERGG
501: GSDKSGSGSN KRPGSVGFRR WYGDDER
101: EAKIQSESAE PVLVAPCAGH SLIPSGNKIL SVAGHTREHT ESLSVKEFDP QTSTWSILRT YGKSPSSRGG QSVTRVGDTL VVFGGEGGGR SLLNELHVLD
201: LETMTWDEFE STGTPPSPRS EHAAACYADR YLLIFGGGSH STCFSDLYLL DMQTMEWSRP KQHGIIPEPR AGHAGVTVGD NWVITGGGNS KKGVPETLVL
301: NMSTLVWSVV TSFEGRAPPT SEGSSLVLHT INGEDFLLSF GGYSGRYSNE VYALKTSLRP SVSSSRIDEV ETNGMTPLSA EVNSSRGPIF EIEELRDDKN
401: NKGVDISKTL VQAVKHEKSQ VEEKLEQEKL QSFHLKKELA DVENKNAELT KELQSVRDQL SDEAARASKL EDGVSEIQQR LQKMETLEKE FELLRSERGG
501: GSDKSGSGSN KRPGSVGFRR WYGDDER
001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP
Arabidopsis Description
ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.