CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68531	Soybean	nucleus	94.76	93.47
KRG92884	Soybean	nucleus	84.59	83.31
VIT_14s0060g02410.t01	Wine grape	plastid	77.5	74.63
CDY05166	Canola	cytosol, nucleus, plastid	73.5	71.62
CDY27769	Canola	cytosol	73.5	71.62
Bra039439.1-P	Field mustard	cytosol	73.34	71.36
AT3G05420.2	Thale cress	cytosol	73.34	71.15
Solyc01g099350.2.1	Tomato	extracellular	72.73	70.55
CDY18777	Canola	cytosol	71.19	69.47
CDY18797	Canola	cytosol	71.19	69.37
Bra040219.1-P	Field mustard	cytosol	71.03	69.32
CDY40708	Canola	cytosol	70.72	68.92
CDX74147	Canola	cytosol, nucleus, plastid	69.95	68.17
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	70.11	68.11
PGSC0003DMT400063503	Potato	extracellular	34.98	67.76
Bra001147.1-P	Field mustard	cytosol	70.26	66.76
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	67.95	66.12
CDY05568	Canola	plastid	67.49	65.67
CDY25029	Canola	cytosol, nucleus, plastid	67.33	65.22
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	66.72	64.24
Os03t0835600-01	Rice	plastid	63.79	63.21
EER90565	Sorghum	plastid	63.64	62.67
GSMUA_Achr6P20340_001	Banana	plastid	64.41	61.29
TraesCS4A01G356400.2	Wheat	plastid	62.87	60.99
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	62.71	60.84
TraesCS5D01G515900.2	Wheat	plastid	62.56	60.69
Zm00001d034758_P003	Maize	plastid	61.79	58.88
HORVU5Hr1G117970.2	Barley	plastid	62.4	58.19
Zm00001d046434_P003	Maize	plastid	50.54	53.86
HORVU5Hr1G025310.1	Barley	cytosol	39.91	53.85
TraesCS5D01G106400.1	Wheat	cytosol	42.22	52.09
TraesCS5A01G094000.1	Wheat	cytosol	41.91	51.61
TraesCS5B01G100100.1	Wheat	cytosol	41.91	51.42
Os12t0540800-01	Rice	extracellular	41.29	50.85
Zm00001d012892_P002	Maize	plastid	60.4	50.06
EES16101	Sorghum	cytosol, nucleus, plastid	39.6	47.68
Zm00001d041692_P001	Maize	nucleus	36.06	43.09
KRG92113	Soybean	cytosol	24.19	42.78
KRH34674	Soybean	cytosol	32.67	42.06
KRG92111	Soybean	cytosol	8.17	38.69
KRH43755	Soybean	cytosol	11.56	22.87
KRH11220	Soybean	mitochondrion	24.19	21.87
KRH21038	Soybean	mitochondrion	23.88	21.83
KRH02216	Soybean	mitochondrion	23.27	21.33
KRH50909	Soybean	nucleus	23.42	20.91
KRG92046	Soybean	cytosol	14.79	19.28
KRG90521	Soybean	peroxisome	18.18	18.7
KRH33805	Soybean	nucleus	18.18	18.7
KRH54725	Soybean	cytosol	17.41	18.43
KRH63188	Soybean	cytosol	17.1	18.11
KRH03160	Soybean	cytosol	17.26	17.89
KRH68432	Soybean	cytosol, nucleus, plastid	17.26	17.67
KRH56785	Soybean	nucleus	17.1	17.62
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	17.87	16.18
KRH63715	Soybean	nucleus	15.72	15.45
KRH54239	Soybean	nucleus	15.41	15.15
KRH51088	Soybean	cytosol	18.95	11.44
KRH02069	Soybean	cytosol	10.02	10.55

Protein Annotations

Gene3D:1.20.80.10	EntrezGene:100777579	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02012163	InterPro:Acyl-CoA-binding_protein
InterPro:Acyl-CoA-binding_sf	ncoils:Coil	InterPro:FERM/acyl-CoA-bd_prot_sf	EnsemblPlantsGene:GLYMA_19G234400	GO:GO:0000062	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	UniProt:I1NBY7	InterPro:IPR000582	InterPro:IPR014352	InterPro:IPR015915
EnsemblPlants:KRG96823	ProteinID:KRG96823	ProteinID:KRG96823.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF00887
PFAM:PF01344	PFAM:PF13415	PFAM:PF13418	PFscan:PS51228	PANTHER:PTHR23244	PANTHER:PTHR23244:SF336
SUPFAM:SSF117281	SUPFAM:SSF47027	UniParc:UPI00023DD315	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr19:-:48402922..48413599

Molecular Weight (calculated)

70669.0 Da

IEP (calculated)

5.204

GRAVY (calculated)

-0.344

Length

649 amino acids

Sequence
(BLAST)

001: MARASSGLQY PERFYAAASY VGFDGSSPTK SLTSKFPQST ALLLYSLYQQ ASVGPCNITE PSTWKIVEHG KWASWNQLGN MSSTEAMRLF VKILEEEDPG
101: WYSRLSNSVV EPVVDVQMNH NSKVEPVIEN GNSYPETKTI SISTQNGSEV GTQDKDTVVE GFGSVEVYDQ WIAPPVSGGS PKARYEHGAA VVQDKLYIYG
201: GNHNGRYLND LHVLDLRSWT WSKIEAKTGV ESPTTSIPCA GHSLIPWGNK LLSIAGHTKD PSESIQVKVF DLQMATWSTP KIFGKAPVSR GGQSVNLVGK
301: TLVIFGGQDA KRTLLNDLHI LDLETMTWDE IDAVGVPPSP RSDHTAAVHV ERYLLIFGGG SHATCYNDLH VLDLQTMEWS RPMQLGEIPT PRAGHAGVTV
401: GENWFIVGGG DNKSGVSETI VLNMSTLAWS VVTSVQGRVP VASEGLSLVV SSYDGEDVLV SFGGYNGRYN NEVYVLKPSH KSTLQSKIIE NSIPDSVSAI
501: PNVTNVESEF EAGHDSNPPK SKGDIVSVLK AEKEELESSL IKEKHHALQL KQDLAEAESC NSDLYKELQS VRGQLASEQS RCFKLEVEVA ELGQKLQTIG
601: TLQKELELLQ RQKAASEQAA LNAKQRQSSG GVWGWLAGTP PPIQNADDA

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.