CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05568	Canola	plastid	94.63	95.05
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	84.03	84.28
CDY05166	Canola	cytosol, nucleus, plastid	77.61	78.08
CDY27769	Canola	cytosol	77.31	77.78
CDY40708	Canola	cytosol	76.27	76.73
CDY18777	Canola	cytosol	75.52	76.09
CDX74147	Canola	cytosol, nucleus, plastid	74.48	74.92
CDY18797	Canola	cytosol	74.33	74.77
VIT_14s0060g02410.t01	Wine grape	plastid	71.64	71.22
Solyc01g099350.2.1	Tomato	extracellular	68.06	68.16
KRG96823	Soybean	cytosol, plastid	65.22	67.33
KRG92884	Soybean	nucleus	65.67	66.77
KRH68531	Soybean	nucleus	65.37	66.57
PGSC0003DMT400063503	Potato	extracellular	31.94	63.88
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	63.43	63.06
EER90565	Sorghum	plastid	60.3	61.3
Os03t0835600-01	Rice	plastid	59.1	60.46
GSMUA_Achr6P20340_001	Banana	plastid	61.19	60.12
TraesCS5D01G515900.2	Wheat	plastid	59.4	59.49
TraesCS4A01G356400.2	Wheat	plastid	59.1	59.19
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	58.96	59.04
Zm00001d034758_P003	Maize	plastid	58.06	57.12
HORVU5Hr1G117970.2	Barley	plastid	58.96	56.75
HORVU5Hr1G025310.1	Barley	cytosol	37.16	51.77
Zm00001d046434_P003	Maize	plastid	46.42	51.07
TraesCS5D01G106400.1	Wheat	cytosol	39.7	50.57
TraesCS5B01G100100.1	Wheat	cytosol	39.7	50.28
Os12t0540800-01	Rice	extracellular	39.4	50.09
TraesCS5A01G094000.1	Wheat	cytosol	39.4	50.09
Zm00001d012892_P002	Maize	plastid	58.06	49.68
EES16101	Sorghum	cytosol, nucleus, plastid	38.66	48.05
Zm00001d041692_P001	Maize	nucleus	36.72	45.3
CDY11290	Canola	cytosol	30.75	40.95
CDY58438	Canola	cytosol	30.75	40.95
CDX85317	Canola	cytosol	11.34	23.6
CDY48738	Canola	cytosol	11.34	23.6
CDY13903	Canola	mitochondrion	23.58	23.44
CDY05697	Canola	cytosol	11.19	23.29
CDY28023	Canola	cytosol	11.34	23.24
CDY35957	Canola	cytosol	11.19	22.94
CDY52048	Canola	plastid	11.94	22.79
CDY19142	Canola	cytosol, peroxisome, plastid	11.94	22.79
CDX92598	Canola	mitochondrion	23.73	22.71
CDX86322	Canola	cytosol	11.64	22.67
CDY30169	Canola	cytosol	10.9	22.6
CDX94790	Canola	cytosol	11.34	22.16
CDX96969	Canola	peroxisome	11.34	22.16
CDY36630	Canola	cytosol	11.19	21.87
CDY08215	Canola	cytosol	11.34	21.84
CDY51408	Canola	cytosol	11.04	21.57
CDY49014	Canola	cytosol	10.9	21.28
CDY30681	Canola	cytosol	10.9	20.98
CDY56199	Canola	cytosol	12.54	20.34
CDY43093	Canola	cytosol	2.39	19.75
CDY67946	Canola	cytosol	10.15	19.37
CDX75043	Canola	cytosol	12.99	19.08
CDY49133	Canola	mitochondrion, nucleus	13.88	18.98
CDY20194	Canola	cytosol	13.13	18.84
CDY28366	Canola	cytosol	13.13	18.84
CDY42440	Canola	mitochondrion	13.58	18.8
CDY26745	Canola	nucleus	14.48	18.76
CDY65743	Canola	cytosol, peroxisome, plastid	11.79	18.68
CDY64894	Canola	cytosol, mitochondrion	7.16	18.6
CDX96712	Canola	mitochondrion	14.48	18.51
CDX84132	Canola	cytosol	13.58	18.38
CDY19228	Canola	nucleus	14.18	18.38
CDY24063	Canola	cytosol, mitochondrion	7.76	18.31
CDX75048	Canola	cytosol, plastid	13.43	18.07
CDX83831	Canola	nucleus	14.33	17.98
CDY03963	Canola	cytosol	12.24	17.56
CDY03958	Canola	cytosol	12.09	17.38
CDX92073	Canola	cytosol	12.24	17.37
CDY56200	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.64	16.85
CDX73059	Canola	cytosol, mitochondrion	13.58	15.64
CDX96521	Canola	mitochondrion	14.33	15.58
CDY34042	Canola	nucleus	14.63	14.78
CDY60589	Canola	cytosol	13.73	11.62
CDY21313	Canola	cytosol	15.97	10.79
CDX75045	Canola	cytosol	13.28	10.61
CDX90875	Canola	cytosol	15.97	10.6
CDX83165	Canola	nucleus	14.48	9.78
CDY43091	Canola	cytosol	1.19	7.08
CDY72137	Canola	cytosol	1.49	6.49
CDY65828	Canola	cytosol	2.69	5.54

Protein Annotations

Gene3D:1.20.80.10	Gene3D:2.120.10.80	MapMan:35.1	GO:A0A078GIF5	UniProt:A0A078GIF5	InterPro:Acyl-CoA-binding_protein
InterPro:Acyl-CoA-binding_sf	EnsemblPlants:CDY25029	ProteinID:CDY25029	ProteinID:CDY25029.1	ncoils:Coil	InterPro:FERM/acyl-CoA-bd_prot_sf
GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00028857001	InterPro:IPR000582
InterPro:IPR014352	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_2	PFAM:PF00887	PFAM:PF07646
PFAM:PF13415	PFscan:PS51228	PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	SUPFAM:SSF117281	SUPFAM:SSF47027
UniParc:UPI0004EE8AA7	SEG:seg	:	:	:	:

Description

BnaC02g39790DBnaC02g39790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIF5]

Coordinates

chrLK032167:-:375980..380790

Molecular Weight (calculated)

72985.8 Da

IEP (calculated)

5.696

GRAVY (calculated)

-0.420

Length

670 amino acids

Sequence
(BLAST)

001: MANTAKQSAT LAYPDRFYAA ASYLGLDGSA PSSVKQLSSK FSNDAVLLLY ALHQQATVGP CNTPKPSAWN PAEQSKWKSW QGLGTMPSIE AMSHFVKILE
101: EGDPSWYPNP PNSVPDPAID VQISSTKAEP SIENGGSFGE TMTTATEDGR LMETQDKDVV LENPNTISVY NQWTAPLTSG HPPKARYEHG AAVIQDKMYM
201: YGGNHNGRYL GDLHVLDLKN WTWSRVETKV VTESQETSSP ATLTHCAGHS LIPWDNKLLS IGGHAKDPSE SILVKVFDLH TCTWSILKTD GKPPISRGGQ
301: SVTLVGKKLV IFGGQDVNKS LLNYLHLLDL DTMTWDEIDA VGSPPSPRSD HAAAVHAERY LLIFGGGSHT NCFSDLHVLD LQTMEWSRHA QQGEAPTPRA
401: GHAGVTIGEN WFIVGGGDNK SGACETVVLN MSTLAWSVLT TVQGGAPLAS EGSSLVVSSY NGEDVIVAFG GYNGRYNNEV NVLKPSHKSS LKSKIMEASP
501: VRDSVSAVNN ATTRDIESEI GVSQESKVRE IVMDNVNSGS KVEGKSERII TSLRSEKEEL EASLSKEKIQ TLQLKEELTE TETRSTELYK ELHSVRSQLA
601: AEQSRCFKLE VEVAEVRQKL QTMETLEKEL ELLHRQRAVA SEQAAVNMNG KPQSFGGVWG WLAGTPPPKT

Best Arabidopsis Sequence Match ( AT5G27630.3 )
(BLAST)

001: MAHMVRASSG LSYPERFYAA ASYVGLDGSQ SSVKQLSSKF SNDTSLLLYT LHQQATLGPC SIPKPSAWNP VEQSKWKSWQ GLGTMPSIEA MRLFVKILEE
101: ADPGWYPRTS NSVLDPAVHV QINSTKAEPS FESGASFGET KTITSEDGRL TETQDKDVVL EDPDTVSVYN QWTAPRTSGQ PPKARYQHGA AVIQDKMYMY
201: GGNHNGRYLG DLHVLDLKNW TWSRVETKVV TGSQETSSPA KLTHCAGHSL IPWDNQLLSI GGHTKDPSES MPVMVFDLHC CSWSILKTYG KPPISRGGQS
301: VTLVGKSLVI FGGQDAKRSL LNDLHILDLD TMTWEEIDAV GSPPTPRSDH AAAVHAERYL LIFGGGSHAT CFDDLHVLDL QTMEWSRHTQ QGDAPTPRAG
401: HAGVTIGENW YIVGGGDNKS GASKTVVLNM STLAWSVVTS VQEHVPLASE GLSLVVSSYN GEDIVVAFGG YNGHYNNEVN VLKPSHKSSL KSKIMGASAV
501: PDSFSAVNNA TTRDIESEIK VSQEGKVREI VMDNVNSRLK VEGKADRIIT TLKSEKEEVE ASLNKEKIQT LQLKEELAEI DTRNTELYKE LQSVRNQLAA
601: EQSRCFKLEV EVAELRQKLQ TMETLQKELE LLQRQRAVAS EQAATMNAKR QSSGGVWGWL AGTPPPKT

Arabidopsis Description

ACBP5acyl-CoA binding protein 5 [Source:TAIR;Acc:AT5G27630]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.