Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72137 | Canola | cytosol | 87.61 | 64.29 |
| CDX92073 | Canola | cytosol | 86.73 | 20.76 |
| CDY03963 | Canola | cytosol | 81.42 | 19.7 |
| CDY03958 | Canola | cytosol | 74.34 | 18.03 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 71.68 | 17.49 |
| CDY28366 | Canola | cytosol | 71.68 | 17.34 |
| CDY20194 | Canola | cytosol | 70.8 | 17.13 |
| CDY65828 | Canola | cytosol | 27.43 | 9.54 |
| CDY56199 | Canola | cytosol | 33.63 | 9.2 |
| CDY60589 | Canola | cytosol | 41.59 | 5.93 |
| CDY24063 | Canola | cytosol, mitochondrion | 11.5 | 4.58 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 9.73 | 3.13 |
| CDY52048 | Canola | plastid | 8.85 | 2.85 |
| CDY08215 | Canola | cytosol | 6.19 | 2.01 |
| CDY30169 | Canola | cytosol | 5.31 | 1.86 |
| CDY36630 | Canola | cytosol | 5.31 | 1.75 |
| CDY51408 | Canola | cytosol | 5.31 | 1.75 |
| CDY30681 | Canola | cytosol | 5.31 | 1.72 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 9.73 | 1.65 |
| CDY18777 | Canola | cytosol | 8.85 | 1.5 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 8.85 | 1.5 |
| CDY27769 | Canola | cytosol | 8.85 | 1.5 |
| CDY40708 | Canola | cytosol | 8.85 | 1.5 |
| CDY18797 | Canola | cytosol | 8.85 | 1.5 |
| CDX96969 | Canola | peroxisome | 4.42 | 1.46 |
| CDX94790 | Canola | cytosol | 4.42 | 1.46 |
| CDY49014 | Canola | cytosol | 4.42 | 1.46 |
| CDY05568 | Canola | plastid | 7.08 | 1.2 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 7.08 | 1.19 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 4.42 | 1.18 |
| CDX92598 | Canola | mitochondrion | 7.08 | 1.14 |
| CDY13903 | Canola | mitochondrion | 6.19 | 1.04 |
| CDY48738 | Canola | cytosol | 2.65 | 0.93 |
| CDY05697 | Canola | cytosol | 2.65 | 0.93 |
| CDX85317 | Canola | cytosol | 2.65 | 0.93 |
| CDY34042 | Canola | nucleus | 5.31 | 0.9 |
| CDX86322 | Canola | cytosol | 2.65 | 0.87 |
| Zm00001d037558_P001 | Maize | cytosol | 0.88 | 0.83 |
| CDY21313 | Canola | cytosol | 6.19 | 0.71 |
| CDX83165 | Canola | nucleus | 6.19 | 0.71 |
| CDX90875 | Canola | cytosol | 6.19 | 0.69 |
| CDY28023 | Canola | cytosol | 1.77 | 0.61 |
| CDY35957 | Canola | cytosol | 1.77 | 0.61 |
| CDX75043 | Canola | cytosol | 1.77 | 0.44 |
| CDX84132 | Canola | cytosol | 1.77 | 0.4 |
| CDX75048 | Canola | cytosol, plastid | 1.77 | 0.4 |
| CDY64894 | Canola | cytosol, mitochondrion | 0.88 | 0.39 |
| CDX75045 | Canola | cytosol | 1.77 | 0.24 |
| CDY42440 | Canola | mitochondrion | 0.88 | 0.21 |
| CDY49133 | Canola | mitochondrion, nucleus | 0.88 | 0.2 |
| CDY11290 | Canola | cytosol | 0.88 | 0.2 |
| CDY58438 | Canola | cytosol | 0.88 | 0.2 |
| CDY26745 | Canola | nucleus | 0.88 | 0.19 |
| CDY19228 | Canola | nucleus | 0.88 | 0.19 |
| CDX96712 | Canola | mitochondrion | 0.88 | 0.19 |
| CDX83831 | Canola | nucleus | 0.88 | 0.19 |
| CDX73059 | Canola | cytosol, mitochondrion | 0.88 | 0.17 |
| CDX96521 | Canola | mitochondrion | 0.88 | 0.16 |
| CDY43093 | Canola | cytosol | 0.0 | 0.0 |
| CDY67946 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY43091 | EnsemblPlantsGene:GSBRNA2T00076054001 | Gene3D:2.100.10.30 | InterPro:IPR001229 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom |
| InterPro:Jacalin-like_lectin_dom_sf | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | PFAM:PF01419 | PFscan:PS51752 | ProteinID:CDY43091 |
| ProteinID:CDY43091.1 | SEG:seg | SMART:SM00915 | SUPFAM:SSF51101 | UniParc:UPI0004EEE77D | UniProt:A0A078HZW1 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC05g36860DBnaC05g36860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZW1]
Coordinates
chrLK032545:+:43057..43494
Molecular Weight (calculated)
12640.8 Da
IEP (calculated)
4.489
GRAVY (calculated)
-0.282
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDGSQVVVG DEHRKQTEKV EEFEVDEDDY IVYVEAFRET VTQETIVALK FETYKGKTNQ VFETSPGVKF VLQGGKIVGF HGRSTDVLHS LGAYVSFSST
101: LDSLGNWIKV EIS
101: LDSLGNWIKV EIS
001: MAQKLEAKGG EMGDVWDDGV YENVRKVYVG QAQYGIAFVK FEYVNGSQVV VGDEHGKKTE LGVEEFEIDA DDYIVYVEGY REKVNDMTSE MITFLSIKTF
101: KGKTSHPIEK RPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLSSTIKLL GKWIKVEQKG EGPGLRCSHG IAQVGNKIYS FGGEFTPNQP IDKHLYVFDL
201: ETRTWSISPA TGDVPHLSCL GVRMVSVGST LYVFGGRDAS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVSAT ARLNTLDSYN
301: IVDKKWFHCS TPGDSLTARG GAGLEVVQGK VWVVYGFNGC EVDDVHYYDP VQDKWTQVET FGVRPSERSV FASAAIGKHI VIFGGEIAMD PLAHVGPGQL
401: TDGTFALDTE TLQWERLDKF GGEEETPSSR GWTASTTATI DGKKGLVMHG GKAPTNDRFD DLFFYGIDSA
101: KGKTSHPIEK RPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLSSTIKLL GKWIKVEQKG EGPGLRCSHG IAQVGNKIYS FGGEFTPNQP IDKHLYVFDL
201: ETRTWSISPA TGDVPHLSCL GVRMVSVGST LYVFGGRDAS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVSAT ARLNTLDSYN
301: IVDKKWFHCS TPGDSLTARG GAGLEVVQGK VWVVYGFNGC EVDDVHYYDP VQDKWTQVET FGVRPSERSV FASAAIGKHI VIFGGEIAMD PLAHVGPGQL
401: TDGTFALDTE TLQWERLDKF GGEEETPSSR GWTASTTATI DGKKGLVMHG GKAPTNDRFD DLFFYGIDSA
Arabidopsis Description
NSP1Nitrile-specifier protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDM9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.