CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49133	Canola	mitochondrion, nucleus	94.83	93.67
CDX73059	Canola	cytosol, mitochondrion	75.83	63.06
CDX96521	Canola	mitochondrion	77.89	61.2
AT1G74150.1	Thale cress	cytosol, mitochondrion	70.45	59.93
CDY26745	Canola	nucleus	56.41	52.8
CDY19228	Canola	nucleus	55.17	51.64
CDX96712	Canola	mitochondrion	54.96	50.76
CDX83831	Canola	nucleus	55.79	50.56
GSMUA_Achr3P30430_001	Banana	cytosol	46.28	47.66
VIT_17s0000g05150.t01	Wine grape	cytosol	52.89	42.31
KRH54725	Soybean	cytosol	51.24	40.46
KRH63188	Soybean	cytosol	51.24	40.46
Solyc03g114960.2.1	Tomato	nucleus	44.83	40.04
CDY28023	Canola	cytosol	18.39	27.22
CDY35957	Canola	cytosol	17.98	26.61
CDX94790	Canola	cytosol	16.32	23.03
CDY48738	Canola	cytosol	15.29	22.98
CDY49014	Canola	cytosol	16.12	22.74
CDX96969	Canola	peroxisome	16.12	22.74
CDY08215	Canola	cytosol	16.32	22.7
CDY19142	Canola	cytosol, peroxisome, plastid	16.32	22.51
CDY64894	Canola	cytosol, mitochondrion	11.98	22.48
CDY30681	Canola	cytosol	16.12	22.41
CDY05697	Canola	cytosol	14.88	22.36
CDX85317	Canola	cytosol	14.88	22.36
CDY52048	Canola	plastid	16.12	22.22
CDY51408	Canola	cytosol	15.7	22.16
CDY36630	Canola	cytosol	15.29	21.57
CDX86322	Canola	cytosol	15.08	21.22
CDY30169	Canola	cytosol	13.43	20.12
CDX75043	Canola	cytosol	18.8	19.96
CDY11290	Canola	cytosol	20.66	19.88
CDY58438	Canola	cytosol	20.45	19.68
CDX84132	Canola	cytosol	19.83	19.39
CDX75048	Canola	cytosol, plastid	19.42	18.88
CDY67946	Canola	cytosol	13.64	18.8
CDY24063	Canola	cytosol, mitochondrion	10.74	18.31
CDY56199	Canola	cytosol	14.46	16.95
CDY65743	Canola	cytosol, peroxisome, plastid	14.26	16.31
CDY03963	Canola	cytosol	15.29	15.85
CDY56200	Canola	endoplasmic reticulum, extracellular, plasma membrane	14.88	15.55
CDY03958	Canola	cytosol	14.88	15.45
CDX92073	Canola	cytosol	14.88	15.25
CDY20194	Canola	cytosol	14.67	15.2
CDY28366	Canola	cytosol	14.46	14.99
CDY18777	Canola	cytosol	19.21	13.98
CDY18797	Canola	cytosol	19.01	13.81
CDY34042	Canola	nucleus	18.8	13.73
CDX74147	Canola	cytosol, nucleus, plastid	18.8	13.66
CDY25029	Canola	cytosol, nucleus, plastid	18.8	13.58
CDY40708	Canola	cytosol	18.59	13.51
CDY27769	Canola	cytosol	18.59	13.51
CDY05166	Canola	cytosol, nucleus, plastid	18.59	13.51
CDY05568	Canola	plastid	18.39	13.34
CDY13903	Canola	mitochondrion	18.18	13.06
CDX92598	Canola	mitochondrion	17.77	12.29
CDY43093	Canola	cytosol	1.86	11.11
CDX75045	Canola	cytosol	18.8	10.85
CDX83165	Canola	nucleus	18.8	9.17
CDY60589	Canola	cytosol	14.67	8.96
CDY21313	Canola	cytosol	18.18	8.87
CDX90875	Canola	cytosol	18.18	8.72
CDY65828	Canola	cytosol	1.24	1.85
CDY43091	Canola	cytosol	0.21	0.88
CDY72137	Canola	cytosol	0.21	0.65

Protein Annotations

EnsemblPlants:CDY42440	EnsemblPlantsGene:GSBRNA2T00074751001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_2	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401
PFAM:PF07646	PFAM:PF13418	ProteinID:CDY42440	ProteinID:CDY42440.1	SEG:seg	SUPFAM:SSF50965
UniParc:UPI0004EED5F6	UniProt:A0A078HVB0	MapMan:35.1	:	:	:

Description

BnaC02g22680DBnaC02g22680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVB0]

Coordinates

chrLK032524:-:213611..216061

Molecular Weight (calculated)

53489.3 Da

IEP (calculated)

5.729

GRAVY (calculated)

-0.513

Length

484 amino acids

Sequence
(BLAST)

001: MRWERVQRQA GLSDSSSGPG KRWGHTCNAV KGGRFVYVFG GFGKDGYFTN QVHVFDAGEQ IWSEPMIRGV PPSPRDSHSC TTVGDNLFVF GGTDGKHYLN
101: DLHVLDTSSH TWKCLEVRGE EPDAREAHSA TLVGKHIFVF GGCGKVPGLD DEVFFNDLYM LNTETITWQR AVTTGTRPFA RDGHTCSTWN NKIIVVGGEH
201: FEGDYLSDVH ILDTDTFAWK QLKTSWQPLT PRAGHITVAI ESNLFVFGGF RDPQNLYNDL YVLDVETGVW SKIVAMEDRP PARFSAAAVC LGPYKAGSFF
301: FFGGCNKNLE PLDDIYYFHT DGVYEARSAQ KEALKCKEQQ KEAVEQGKTV FQARVTENSP LGYYTIETII DGKVLRGVLL SSRHPSSVQT ADPSSTSRQV
401: CWLKRPAMLD ADCDHGAKTQ RTLSKDTAGS SQQAGPVDPS DDAYKKANVE PLRNEMSTDV GAGGDSSPQK QDEERVAAED AEPK

Best Arabidopsis Sequence Match ( AT1G74150.1 )
(BLAST)

001: MRWERVQQVG LGDSSSFGPG KRWGHTCNAI KGGRFLYVFG GFGRDNCLTN QVHVFDAETQ IWIRPEINGV PPCPRDSHSC TTVGDNLFVF GGTDGTKYLN
101: DVHILDTYSH TWIRPDIRGE GPRVREAHSA ALVDKRLFIF GGCGKSSDSD DEVFYNDLYI LNTETYMWKR AVTSGKPPSA RDSHTCSAWK NKIIVVGGED
201: LDDYYLSDVH ILDTDKFVWK ELKTSGQVLT PRAGHVTVAL ERNLFVFGGF TDSQNLYDDL YVLDLETGVW SKVVAMVEGP SARFSSAAVC LDPYKAGSFF
301: FVGGCNKNLE PLDDIYYLHT EGRYDVRFHQ NPGRSSLRKQ MKLKCQGQEL TVAKTNIDHG RENVPLNIGY IDQRKPMFQA RVTENAPLGY TIETIIDGKV
401: LRGVLFSNRH SSVRIADSSI SSRQVERPAT SDGDCDHRAK IPRTFSKDPA GSSQQAGPTD PSDDTNKKVA DSNDTDTPMI DTVDANVNME GTHEAETAAV
501: TIDAKDQDAS QLDKGIVNTD PLPVSHDQVN VISTDAAKAD PGVDSSTRKQ EEGTSAEEDA NVGPQPQQH

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTV1]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.