Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34042 | Canola | nucleus | 66.23 | 99.09 |
| AT5G50310.1 | Thale cress | nucleus | 62.2 | 92.64 |
| KRH63715 | Soybean | nucleus | 51.31 | 77.12 |
| KRH54239 | Soybean | nucleus | 50.81 | 76.36 |
| VIT_17s0000g10130.t01 | Wine grape | nucleus | 52.12 | 75.81 |
| PGSC0003DMT400039402 | Potato | nucleus | 51.01 | 74.85 |
| Solyc03g111390.2.1 | Tomato | nucleus | 50.81 | 74.56 |
| KXG26585 | Sorghum | nucleus | 46.67 | 70.36 |
| Os04t0483600-01 | Rice | nucleus | 46.88 | 70.24 |
| TraesCS2B01G361300.1 | Wheat | nucleus | 46.67 | 70.05 |
| TraesCS2A01G321200.1 | Wheat | nucleus | 46.57 | 69.89 |
| Bra000617.1-P | Field mustard | endoplasmic reticulum | 66.43 | 69.15 |
| TraesCS2D01G342300.1 | Wheat | nucleus | 41.23 | 67.16 |
| HORVU2Hr1G083780.14 | Barley | nucleus, plastid | 44.15 | 65.67 |
| Zm00001d003259_P006 | Maize | endoplasmic reticulum, mitochondrion, nucleus, plasma membrane | 44.15 | 61.69 |
| GSMUA_Achr10P... | Banana | nucleus | 30.44 | 61.01 |
| CDY28023 | Canola | cytosol | 7.76 | 23.55 |
| CDY35957 | Canola | cytosol | 7.56 | 22.94 |
| CDY36630 | Canola | cytosol | 7.56 | 21.87 |
| CDY48738 | Canola | cytosol | 7.06 | 21.74 |
| CDY05697 | Canola | cytosol | 6.96 | 21.43 |
| CDY51408 | Canola | cytosol | 7.36 | 21.28 |
| CDX85317 | Canola | cytosol | 6.85 | 21.12 |
| CDY30169 | Canola | cytosol | 6.85 | 21.05 |
| CDX94790 | Canola | cytosol | 7.26 | 20.99 |
| CDX96969 | Canola | peroxisome | 7.16 | 20.7 |
| CDY30681 | Canola | cytosol | 7.26 | 20.69 |
| CDY08215 | Canola | cytosol | 7.26 | 20.69 |
| CDY64894 | Canola | cytosol, mitochondrion | 5.34 | 20.54 |
| CDY52048 | Canola | plastid | 7.16 | 20.23 |
| CDY49014 | Canola | cytosol | 6.96 | 20.12 |
| CDX86322 | Canola | cytosol | 6.96 | 20.06 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 7.06 | 19.94 |
| CDX75043 | Canola | cytosol | 8.77 | 19.08 |
| CDY67946 | Canola | cytosol | 6.65 | 18.8 |
| CDY42440 | Canola | mitochondrion | 9.17 | 18.8 |
| CDX84132 | Canola | cytosol | 9.27 | 18.59 |
| CDX83831 | Canola | nucleus | 9.98 | 18.54 |
| CDY49133 | Canola | mitochondrion, nucleus | 9.07 | 18.37 |
| CDX96712 | Canola | mitochondrion | 9.68 | 18.32 |
| CDX75048 | Canola | cytosol, plastid | 9.17 | 18.27 |
| CDY56199 | Canola | cytosol | 7.56 | 18.16 |
| CDY26745 | Canola | nucleus | 9.07 | 17.41 |
| CDY19228 | Canola | nucleus | 9.07 | 17.41 |
| CDY24063 | Canola | cytosol, mitochondrion | 4.94 | 17.25 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 7.26 | 17.02 |
| CDX92073 | Canola | cytosol | 7.66 | 16.1 |
| CDY03963 | Canola | cytosol | 7.56 | 16.06 |
| CDY20194 | Canola | cytosol | 7.56 | 16.06 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 7.46 | 15.98 |
| CDY03958 | Canola | cytosol | 7.46 | 15.88 |
| CDY28366 | Canola | cytosol | 7.46 | 15.85 |
| CDY11290 | Canola | cytosol | 7.66 | 15.11 |
| CDY18797 | Canola | cytosol | 10.08 | 15.02 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 10.08 | 15.02 |
| CDY40708 | Canola | cytosol | 10.08 | 15.02 |
| CDY58438 | Canola | cytosol | 7.56 | 14.91 |
| CDY18777 | Canola | cytosol | 9.98 | 14.89 |
| CDX73059 | Canola | cytosol, mitochondrion | 8.67 | 14.78 |
| CDX96521 | Canola | mitochondrion | 9.17 | 14.77 |
| CDY05568 | Canola | plastid | 9.88 | 14.69 |
| CDY13903 | Canola | mitochondrion | 9.88 | 14.54 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 9.78 | 14.48 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 9.68 | 14.41 |
| CDY27769 | Canola | cytosol | 9.68 | 14.41 |
| CDX92598 | Canola | mitochondrion | 9.98 | 14.14 |
| CDY43093 | Canola | cytosol | 1.01 | 12.35 |
| CDX75045 | Canola | cytosol | 8.97 | 10.61 |
| CDY21313 | Canola | cytosol | 9.78 | 9.78 |
| CDX90875 | Canola | cytosol | 9.78 | 9.61 |
| CDY60589 | Canola | cytosol | 7.46 | 9.34 |
| CDY43091 | Canola | cytosol | 0.71 | 6.19 |
| CDY72137 | Canola | cytosol | 0.81 | 5.19 |
| CDY65828 | Canola | cytosol | 1.21 | 3.69 |
Protein Annotations
| EnsemblPlants:CDX83165 | EnsemblPlantsGene:GSBRNA2T00138693001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4110 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | ncoils:Coil | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF410 | PFAM:PF13415 | PFAM:PF13418 | PFAM:PF13422 | ProteinID:CDX83165 | ProteinID:CDX83165.1 |
| SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0004EF4584 | MapMan:35.2 | : |
Description
BnaA03g23410D
Coordinates
chrLK031832:-:164749..172633
Molecular Weight (calculated)
113058.0 Da
IEP (calculated)
4.446
GRAVY (calculated)
-0.804
Length
992 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKTKKAGK GKEKTERKTA KAEEKKARRE GKKLSPEDDI DAILLSIQKE EAKKKEVLIE ENVPAPSPRS NCSLTINPLK ETELILYGGE FYNGQKTYVY
101: GDLYRYDVDK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGVVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKN LEAKPMTSND DDDDDDEMDS AEGESPSAMG DVAGSSDGIS
401: ERMAACLTVE GSTSKALKGR LDPQVSVSEE VVKPCGRINS CMVVGKDTLY IYGGMMEIKD KEITLDDLYS LNLSKLDEWK CIIPATETEW VEVSEDEEGD
501: EDEDEDDSED EGDSEESDDE DDDEEVEQFQ LMKVKKMYYN DLYVFDLDQY KWQEIKPKPG AMWPTARSGF QFFVYQDEIF LYGGYSKEVS SEKSSEKGVV
601: HADLWSLDPR TWEWNKVKKI GMPPSSRAGF SVCVHKKRAL LFGGVVDMEM EGDVMMSLFL NELYGFQLDN RRWYPIELRK EKSSKDKAKK NLEAKSMASN
701: DDDDDDDEMD SAEGESPSAM GDVAGSSDGI SERMAACLTV EGSTSKALKG RLDPQVSVSE EVVKPCGRIN SCMVVGKDTL YIYGGMMEIK DKEITLDDLY
801: SLNLSKLDEW KCIIPATETE WVEVSEDEEG DEDEDEDDSE DEGDSEESDD EDDDEEVEGM DVDGLVKVGE VVAMIKGEGK ALRRKEKRAR IEQIRANLGL
901: SDSQRTPVPG ETLKDFYKRT NMYWQMAAYE HTQHTGKELR KDGFDLAETR YLELKPILDE LAILEAEQKA EEAERPEASG TSRKGGIAKK KR
101: GDLYRYDVDK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGVVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKN LEAKPMTSND DDDDDDEMDS AEGESPSAMG DVAGSSDGIS
401: ERMAACLTVE GSTSKALKGR LDPQVSVSEE VVKPCGRINS CMVVGKDTLY IYGGMMEIKD KEITLDDLYS LNLSKLDEWK CIIPATETEW VEVSEDEEGD
501: EDEDEDDSED EGDSEESDDE DDDEEVEQFQ LMKVKKMYYN DLYVFDLDQY KWQEIKPKPG AMWPTARSGF QFFVYQDEIF LYGGYSKEVS SEKSSEKGVV
601: HADLWSLDPR TWEWNKVKKI GMPPSSRAGF SVCVHKKRAL LFGGVVDMEM EGDVMMSLFL NELYGFQLDN RRWYPIELRK EKSSKDKAKK NLEAKSMASN
701: DDDDDDDEMD SAEGESPSAM GDVAGSSDGI SERMAACLTV EGSTSKALKG RLDPQVSVSE EVVKPCGRIN SCMVVGKDTL YIYGGMMEIK DKEITLDDLY
801: SLNLSKLDEW KCIIPATETE WVEVSEDEEG DEDEDEDDSE DEGDSEESDD EDDDEEVEGM DVDGLVKVGE VVAMIKGEGK ALRRKEKRAR IEQIRANLGL
901: SDSQRTPVPG ETLKDFYKRT NMYWQMAAYE HTQHTGKELR KDGFDLAETR YLELKPILDE LAILEAEQKA EEAERPEASG TSRKGGIAKK KR
001: MGKKTKKPGK GKEKTERKTA KADEKKARRE GKKLSPEDDI DAILLNIQKE EAKKKEVHVE ENVAAPSPRS NCSLTINPLK ETELILYGGE FYNGQKTYVY
101: GDLYRYDVEK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGIVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKT LEAKPVASNN DDEMDSTEED ESLAMIEQTD GVGSSDGISE
401: RMATNLTVDG NRSDKSKALQ GAKTRLDPQV SVSEEVVKPC GRINSCMVVG KDTLYIYGGM MEIKDKEVTL DDLYSLNLSK LDEWKCIIPT TETEWVEVSD
501: DEEGDEDDDE DDSEDEGNSE ESDDEDDDEE VEAMDVDGSV KVGVVVAMIK GQGKSLRRKE KRARIEQIRA NLGLSDSQRT PVPGETLKDF YKRTNMYWQM
601: AAYEHTQHTG KELRKDGFDL AETRYLELKP ILDELAILEA EQKAEEAEGP EASSSSRKGG IAKKKR
101: GDLYRYDVEK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGIVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKT LEAKPVASNN DDEMDSTEED ESLAMIEQTD GVGSSDGISE
401: RMATNLTVDG NRSDKSKALQ GAKTRLDPQV SVSEEVVKPC GRINSCMVVG KDTLYIYGGM MEIKDKEVTL DDLYSLNLSK LDEWKCIIPT TETEWVEVSD
501: DEEGDEDDDE DDSEDEGNSE ESDDEDDDEE VEAMDVDGSV KVGVVVAMIK GQGKSLRRKE KRARIEQIRA NLGLSDSQRT PVPGETLKDF YKRTNMYWQM
601: AAYEHTQHTG KELRKDGFDL AETRYLELKP ILDELAILEA EQKAEEAEGP EASSSSRKGG IAKKKR
Arabidopsis Description
AT5g50310/MXI22_1 [Source:UniProtKB/TrEMBL;Acc:Q945N1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.